Works matching IS 08873585 AND DT 2006 AND VI 62 AND IP 1

Results: 31

Assessing protein disorder and induced folding.

Published in:

Proteins, 2006, v. 62, n. 1, p. 24, doi. 10.1002/prot.20750

By:

Receveur-Bréchot, Véronique;
Bourhis, Jean-Marie;
Uversky, Vladimir N.;
Canard, Bruno;
Longhi, Sonia

Publication type:

Article

Crystal structure of Escherichia coli DkgA, a broad-specificity aldo-keto reductase.

Published in:

Proteins, 2006, v. 62, n. 1, p. 302, doi. 10.1002/prot.20710

By:

Jeudy, Sandra;
Monchois, Vincent;
Maza, Caroline;
Claverie, Jean-Michel;
Abergel, Chantal

Publication type:

Article

Managing and mining protein crystallization data.

Published in:

Proteins, 2006, v. 62, n. 1, p. 4, doi. 10.1002/prot.20776

By:

Amin, Abdullah A.;
Faux, Noel G.;
Fenalti, Gustavo;
Williams, Geoffrey;
Bernadou, Adam;
Daglish, Ben;
Keefe, Karen;
Middleton, Shayne;
Rae, Joseph;
Tetis, Kosmas;
Law, Ruby H.P.;
Fulton, Kate F.;
Rossjohn, Jamie;
Whisstock, James C.;
Buckle, Ashley M.

Publication type:

Article

A computational protocol to probe the role of solvation effects on the reduction potential of azurin mutants.

Published in:

Proteins, 2006, v. 62, n. 1, p. 262, doi. 10.1002/prot.20772

By:

Barone, Vincenzo;
De Rienzo, Francesca;
Langella, Emma;
Menziani, M. Cristina;
Rega, Nadia;
Sola, Marco

Publication type:

Article

Dynamics of the trimeric AcrB transporter protein inferred from a B-factor analysis of the crystal structure.

Published in:

Proteins, 2006, v. 62, n. 1, p. 152, doi. 10.1002/prot.20743

By:

Lu, W.C.;
Wang, C.Z.;
Yu, E.W.;
Ho, K.M.

Publication type:

Article

Computational characterization of the sequence landscape in simple protein alphabets.

Published in:

Proteins, 2006, v. 62, n. 1, p. 232, doi. 10.1002/prot.20714

By:

Shell, M. Scott;
Debenedetti, Pablo G.;
Panagiotopoulos, Athanassios Z.

Publication type:

Article

Structure and mechanism of the farnesyl diphosphate synthase from Trypanosoma cruzi: Implications for drug design.

Published in:

Proteins, 2006, v. 62, n. 1, p. 80, doi. 10.1002/prot.20754

By:

Gabelli, Sandra B.;
McLellan, Jason S.;
Montalvetti, Andrea;
Oldfield, Eric;
Docampo, Roberto;
Amzel, L. Mario

Publication type:

Article

Crystal structure of virulence factor CJ0248 from Campylobacter jejuni at 2.25 Å resolution reveals a new fold.

Published in:

Proteins, 2006, v. 62, n. 1, p. 292, doi. 10.1002/prot.20611

By:

Xu, Qingping;
Schwarzenbacher, Robert;
McMullan, Daniel;
Abdubek, Polat;
Agarwalla, Sanjay;
Ambing, Eileen;
Axelrod, Herbert;
Biorac, Tanya;
Canaves, Jaume M.;
Chiu, Hsiu-Ju;
Deacon, Ashley M.;
DiDonato, Michael;
Elsliger, Marc-André;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Hale, Joanna;
Hampton, Eric;
Han, Gye Won;
Haugen, Justin

Publication type:

Article

Structure, conformational stability, and enzymatic properties of acylphosphatase from the hyperthermophile Sulfolobus solfataricus.

Published in:

Proteins, 2006, v. 62, n. 1, p. 64, doi. 10.1002/prot.20703

By:

Corazza, Alessandra;
Rosano, Camillo;
Pagano, Katiuscia;
Alverdi, Vera;
Esposito, Gennaro;
Capanni, Cristina;
Bemporad, Francesco;
Plakoutsi, Georgia;
Stefani, Massimo;
Chiti, Fabrizio;
Zuccotti, Simone;
Bolognesi, Martino;
Viglino, Paolo

Publication type:

Article

Modeling truncated hemoglobin vibrational dynamics.

Published in:

Proteins, 2006, v. 62, n. 1, p. 173, doi. 10.1002/prot.20707

By:

Marsella, Luca

Publication type:

Article

Novel statistical-thermodynamic methods to predict protein-ligand binding positions using probability distribution functions.

Published in:

Proteins, 2006, v. 62, n. 1, p. 202, doi. 10.1002/prot.20673

By:

Ruvinsky, A. M.;
Kozintsev, A. V.

Publication type:

Article

Crystal structure of dihydrodipicolinate synthase (BA3935) from Bacillus anthracis at 1.94 Å resolution.

Published in:

Proteins, 2006, v. 62, n. 1, p. 297, doi. 10.1002/prot.20684

By:

Blagova, Elena;
Levdikov, Vladimir;
Milioti, Natalia;
Fogg, Mark J.;
Kalliomaa, Anne K.;
Brannigan, James A.;
Wilson, Keith S.;
Wilkinson, Anthony J.

Publication type:

Article

NMR structure of protein yqbG from Bacillus subtilis reveals a novel α-helical protein fold.

Published in:

Proteins, 2006, v. 62, n. 1, p. 288, doi. 10.1002/prot.20666

By:

Liu, Gaohua;
Shen, Yang;
Xiao, Rong;
Acton, Tom;
Ma, Li Chung;
Joachimiak, Andrzej;
Montelione, Gaetano T.;
Szyperski, Thomas

Publication type:

Article

B. subtilis ykuD protein at 2.0 Å resolution: Insights into the structure and function of a novel, ubiquitous family of bacterial enzymes.

Published in:

Proteins, 2006, v. 62, n. 1, p. 144, doi. 10.1002/prot.20702

By:

Bielnicki, Jakub;
Devedjiev, Yancho;
Derewenda, Urszula;
Dauter, Zbigniew;
Joachimiak, Andrzej;
Derewenda, Zygmunt S.

Publication type:

Article

Preparation of amino-acid-type selective isotope labeling of protein expressed in Pichia pastoris.

Published in:

Proteins, 2006, v. 62, n. 1, p. 279, doi. 10.1002/prot.20742

By:

Chen, Chiu-Yueh;
Cheng, Chun-Ho;
Chen, Yi-Chun;
Lee, Jenq-Chang;
Chou, Shan-Ho;
Huang, Wenya;
Chuang, Woei-Jer

Publication type:

Article

Modeling evolution of hydrogen bonding and stabilization of transition states in the process of cocaine hydrolysis catalyzed by human butyrylcholinesterase.

Published in:

Proteins, 2006, v. 62, n. 1, p. 99, doi. 10.1002/prot.20713

By:

Gao, Daquan;
Zhan, Chang-Guo

Publication type:

Article

Pressure effect on the stability and the conformational dynamics of the D-Galactose/D-Glucose-binding protein from Escherichia coli.

Published in:

Proteins, 2006, v. 62, n. 1, p. 193, doi. 10.1002/prot.20753

By:

Marabotti, Anna;
Herman, Petr;
Staiano, Maria;
Varriale, Antonio;
de Champdoré, Marcella;
Rossi, Mosè;
Gryczynski, Zygmunt;
D'Auria, Sabato

Publication type:

Article

Misfolding of the amyloid β-protein: A molecular dynamics study.

Published in:

Proteins, 2006, v. 62, n. 1, p. 183, doi. 10.1002/prot.20683

By:

Flöck, Dagmar;
Colacino, Stefano;
Colombo, Giorgio;
Di Nola, Alfredo

Publication type:

Article

Optimization of multiple-sequence alignment based on multiple-structure alignment.

Published in:

Proteins, 2006, v. 62, n. 1, p. 209, doi. 10.1002/prot.20665

By:

Shatsky, Maxim;
Nussinov, Ruth;
Wolfson, Haim J.

Publication type:

Article

The CDR1 of the human λVI light chains adopts a new canonical structure.

Published in:

Proteins, 2006, v. 62, n. 1, p. 122, doi. 10.1002/prot.20779

By:

del Pozo Yauner, L.;
Ortiz, E.;
Becerril, B.

Publication type:

Article

The Protein Circular Dichroism Data Bank (PCDDB): A bioinformatics and spectroscopic resource.

Published in:

Proteins, 2006, v. 62, n. 1, p. 1, doi. 10.1002/prot.20676

By:

Wallace, B. A.;
Whitmore, Lee;
Janes, Robert W.

Publication type:

Article

Divalent ion-binding properties of the two avian β-parvalbumins.

Published in:

Proteins, 2006, v. 62, n. 1, p. 270, doi. 10.1002/prot.20701

By:

Henzl, Michael T.;
Agah, Sayeh

Publication type:

Article

Are structural biases at protein termini a signature of vectorial folding?

Published in:

Proteins, 2006, v. 62, n. 1, p. 17, doi. 10.1002/prot.20712

By:

Laio, Alessandro;
Micheletti, Cristian

Publication type:

Article

Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair.

Published in:

Proteins, 2006, v. 62, n. 1, p. 130, doi. 10.1002/prot.20745

By:

Livesay, Dennis R.;
Jacobs, Donald J.

Publication type:

Article

Molecular surface generation using a variable-radius solvent probe.

Published in:

Proteins, 2006, v. 62, n. 1, p. 244, doi. 10.1002/prot.20682

By:

Bhat, Sathesh;
Purisima, Enrico O.

Publication type:

Article

The crystal structure of Aq_328 from the hyperthermophilic bacteria Aquifex aeolicus shows an ancestral histone fold.

Published in:

Proteins, 2006, v. 62, n. 1, p. 8, doi. 10.1002/prot.20590

By:

Qiu, Yang;
Tereshko, Valentina;
Kim, Youngchang;
Zhang, Rongguang;
Collart, Frank;
Yousef, Mohammed;
Kossiakoff, Anthony;
Joachimiak, Andrzej

Publication type:

Article

Effect of linker segments on the stability of epithelial cadherin domain 2.

Published in:

Proteins, 2006, v. 62, n. 1, p. 111, doi. 10.1002/prot.20657

By:

Prasad, Alka;
Zhao, Huaying;
Rutherford, John M.;
Housley, Nicole;
Nichols, Corey;
Pedigo, Susan

Publication type:

Article

Role of phosphorylated Thr160 for the activation of the CDK2/Cyclin A complex.

Published in:

Proteins, 2006, v. 62, n. 1, p. 89, doi. 10.1002/prot.20697

By:

De Vivo, Marco;
Cavalli, Andrea;
Bottegoni, Giovanni;
Carloni, Paolo;
Recanatini, Maurizio

Publication type:

Article

Folding pathway dependence on energetic frustration and interaction heterogeneity for a three-dimensional hydrophobic protein model.

Published in:

Proteins, 2006, v. 62, n. 1, p. 46, doi. 10.1002/prot.20711

By:

Garcia, Leandro G.;
Pereira de Araújo, Antônio F.

Publication type:

Article

Molecular dynamics study on the folding and metallation of the individual domains of metallothionein.

Published in:

Proteins, 2006, v. 62, n. 1, p. 159, doi. 10.1002/prot.20663

By:

Rigby, Kelly E.;
Chan, Jayna;
Mackie, Jason;
Stillman, Martin J.

Publication type:

Article

Prediction of transporter family from protein sequence by support vector machine approach.

Published in:

Proteins, 2006, v. 62, n. 1, p. 218, doi. 10.1002/prot.20605

By:

Lin, H. H.;
Han, L. Y.;
Cai, C. Z.;
Ji, Z. L.;
Chen, Y. Z.

Publication type:

Article