Works matching IS 08873585 AND DT 2005 AND VI 61 AND IP S7

Results: 26

The prediction of protein function at CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 201, doi. 10.1002/prot.20738

By:

Soro, Simonetta;
Tramontano, Anna

Publication type:

Article

Progress over the first decade of CASP experiments.

Published in:

Proteins, 2005, v. 61, n. S7, p. 225, doi. 10.1002/prot.20740

By:

Kryshtafovych, Andriy;
Venclovas, Česlovas;
Fidelis, Krzysztof;
Moult, John

Publication type:

Article

Assessment of CASP6 predictions for new and nearly new fold targets.

Published in:

Proteins, 2005, v. 61, n. S7, p. 67, doi. 10.1002/prot.20722

By:

Vincent, James J.;
Tai, Chin-Hsien;
Sathyanarayana, B.K.;
Lee, Byungkook

Publication type:

Article

Prediction of CASP6 structures using automated robetta protocols.

Published in:

Proteins, 2005, v. 61, n. S7, p. 157, doi. 10.1002/prot.20733

By:

Chivian, Dylan;
Kim, David E.;
Malmström, Lars;
Schonbrun, Jack;
Rohl, Carol A.;
Baker, David

Publication type:

Article

Sixth meeting on the critical assessment of techniques for protein structure prediction.

Published in:

Proteins, 2005, v. 61, n. S7, p. 1, doi. 10.1002/prot.20715

By:

Lattman, Eaton E.

Publication type:

Article

FRankenstein becomes a cyborg: The automatic recombination and realignment of fold recognition models in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 106, doi. 10.1002/prot.20726

By:

Kosinski, Jan;
Gajda, Michal J.;
Cymerman, Iwona A.;
Kurowski, Michal A.;
Pawlowski, Marcin;
Boniecki, Michal;
Obarska, Agnieszka;
Papaj, Grzegorz;
Sroczynska-Obuchowicz, Paulina;
Tkaczuk, Karolina L.;
Sniezynska, Paulina;
Sasin, Joanna M.;
Augustyn, Anna;
Bujnicki, Janusz M.;
Feder, Marcin

Publication type:

Article

Automated prediction of domain boundaries in CASP6 targets using Ginzu and RosettaDOM.

Published in:

Proteins, 2005, v. 61, n. S7, p. 193, doi. 10.1002/prot.20737

By:

Kim, David E.;
Chivian, Dylan;
Malmström, Lars;
Baker, David

Publication type:

Article

System for accepting server predictions in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 24, doi. 10.1002/prot.20719

By:

Eyrich, Volker A.;
Kryshtafovych, Andriy;
Milostan, Maciej;
Fidelis, Krzysztof

Publication type:

Article

Assessment of fold recognition predictions in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 46, doi. 10.1002/prot.20721

By:

Wang, Guoli;
Jin, Yumi;
Dunbrack, Roland L.

Publication type:

Article

SPARKS 2 and SP<sup>3</sup> servers in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 152, doi. 10.1002/prot.20732

By:

Zhou, Hongyi;
Zhou, Yaoqi

Publication type:

Article

Comparative modeling in CASP6 using consensus approach to template selection, sequence-structure alignment, and structure assessment.

Published in:

Proteins, 2005, v. 61, n. S7, p. 99, doi. 10.1002/prot.20725

By:

Venclovas, Česlovas;
Margelevičius, Mindaugas

Publication type:

Article

Evaluation of domain prediction in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 183, doi. 10.1002/prot.20736

By:

Tai, Chin-Hsien;
Lee, Woei-Jyh;
Vincent, James J.;
Lee, Byungkook

Publication type:

Article

CASP6 data processing and automatic evaluation at the protein structure prediction center.

Published in:

Proteins, 2005, v. 61, n. S7, p. 19, doi. 10.1002/prot.20718

By:

Kryshtafovych, Andriy;
Milostan, Maciej;
Szajkowski, Lukasz;
Daniluk, Pawel;
Fidelis, Krzysztof

Publication type:

Article

Free modeling with Rosetta in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 128, doi. 10.1002/prot.20729

By:

Bradley, Philip;
Malmström, Lars;
Qian, Bin;
Schonbrun, Jack;
Chivian, Dylan;
Kim, David E.;
Meiler, Jens;
Misura, Kira M.S.;
Baker, David

Publication type:

Article

Assessment of predictions submitted for the CASP6 comparative modeling category.

Published in:

Proteins, 2005, v. 61, n. S7, p. 27, doi. 10.1002/prot.20720

By:

Tress, Michael;
Ezkurdia, Iakes;
Graña, Osvaldo;
López, Gonzalo;
Valencia, Alfonso

Publication type:

Article

Prediction of novel and analogous folds using fragment assembly and fold recognition.

Published in:

Proteins, 2005, v. 61, n. S7, p. 143, doi. 10.1002/prot.20731

By:

Jones, D. T.;
Bryson, K.;
Coleman, A.;
McGuffin, L. J.;
Sadowski, M. I.;
Sodhi, J. S.;
Ward, J. J.

Publication type:

Article

TASSER: An automated method for the prediction of protein tertiary structures in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 91, doi. 10.1002/prot.20724

By:

Zhang, Yang;
Arakaki, Adrian K.;
Skolnick, Jeffrey

Publication type:

Article

Exploiting heterogeneous sequence properties improves prediction of protein disorder.

Published in:

Proteins, 2005, v. 61, n. S7, p. 176, doi. 10.1002/prot.20735

By:

Obradovic, Zoran;
Peng, Kang;
Vucetic, Slobodan;
Radivojac, Predrag;
Dunker, A. Keith

Publication type:

Article

Domain definition and target classification for CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 8, doi. 10.1002/prot.20717

By:

Tress, Michael;
Tai, Chin-Hsien;
Wang, Guoli;
Ezkurdia, Iakes;
López, Gonzalo;
Valencia, Alfonso;
Lee, Byungkook;
Dunbrack, Roland L.

Publication type:

Article

Protein structure prediction in CASP6 using CHIMERA and FAMS.

Published in:

Proteins, 2005, v. 61, n. S7, p. 122, doi. 10.1002/prot.20728

By:

Takeda-Shitaka, Mayuko;
Terashi, Genki;
Takaya, Daisuke;
Kanou, Kazuhiko;
Iwadate, Mitsuo;
Umeyama, Hideaki

Publication type:

Article

CASP6 assessment of contact prediction.

Published in:

Proteins, 2005, v. 61, n. S7, p. 214, doi. 10.1002/prot.20739

By:

Graña, Osvaldo;
Baker, David;
MacCallum, Robert M.;
Meiler, Jens;
Punta, Marco;
Rost, Burkhard;
Tress, Michael L.;
Valencia, Alfonso

Publication type:

Article

SAM-T04: What is new in protein-structure prediction for CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 135, doi. 10.1002/prot.20730

By:

Karplus, Kevin;
Katzman, Sol;
Shackleford, George;
Koeva, Martina;
Draper, Jenny;
Barnes, Bret;
Soriano, Marcia;
Hughey, Richard

Publication type:

Article

Generalized protein structure prediction based on combination of fold-recognition with de novo folding and evaluation of models.

Published in:

Proteins, 2005, v. 61, n. S7, p. 84, doi. 10.1002/prot.20723

By:

Koliński, Andrzej;
Bujnicki, Janusz M.

Publication type:

Article

Assessment of disorder predictions in CASP6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 167, doi. 10.1002/prot.20734

By:

Jin, Yumi;
Dunbrack, Roland L.

Publication type:

Article

Critical assessment of methods of protein structure prediction (CASP)-Round 6.

Published in:

Proteins, 2005, v. 61, n. S7, p. 3, doi. 10.1002/prot.20716

By:

Moult, John;
Fidelis, Krzysztof;
Rost, Burkhard;
Hubbard, Tim;
Tramontano, Anna

Publication type:

Article

Protein structure prediction using a variety of profile libraries and 3D verification.

Published in:

Proteins, 2005, v. 61, n. S7, p. 114, doi. 10.1002/prot.20727

By:

Tomii, Kentaro;
Hirokawa, Takatsugu;
Motono, Chie

Publication type:

Article