Works matching IS 08873585 AND DT 2005 AND VI 59 AND IP 4

Results: 21

Crystal structure of a calcium-induced dimer of two isoforms of cobra phospholipase A<sub>2</sub> at 1.6 Å resolution.

Published in:

Proteins, 2005, v. 59, n. 4, p. 856, doi. 10.1002/prot.20464

By:

Jabeen, T.;
Sharma, S.;
Singh, N.;
Singh, R. K.;
Kaur, P.;
Perbandt, M.;
Betzel, Ch.;
Srinivasan, A.;
Singh, T. P.

Publication type:

Article

Helix-coil transition of alanine peptides in water: Force field dependence on the folded and unfolded structures.

Published in:

Proteins, 2005, v. 59, n. 4, p. 773, doi. 10.1002/prot.20439

By:

Gnanakaran, S.;
García, Angel E.

Publication type:

Article

Folding is not required for bilayer insertion: Replica exchange simulations of an α-helical peptide with an explicit lipid bilayer.

Published in:

Proteins, 2005, v. 59, n. 4, p. 783, doi. 10.1002/prot.20460

By:

Nymeyer, Hugh;
Woolf, Thomas B.;
Garcia, Angel E.

Publication type:

Article

Clustering algorithms for identifying core atom sets and for assessing the precision of protein structure ensembles.

Published in:

Proteins, 2005, v. 59, n. 4, p. 673, doi. 10.1002/prot.20402

By:

Snyder, David A.;
Montelione, Gaetano T.

Publication type:

Article

O-raffinose crosslinked hemoglobin lacks site-specific chemistry in the central cavity: Structural and functional consequences of β93Cys modification.

Published in:

Proteins, 2005, v. 59, n. 4, p. 840, doi. 10.1002/prot.20453

By:

Boykins, Robert A.;
Buehler, Paul W.;
Jia, Yiping;
Venable, Richard;
Alayash, Abdu I.

Publication type:

Article

Crystal structure of an indigoidine synthase A (IndA)-like protein (TM1464) from Thermotoga maritima at 1.90 Å resolution reveals a new fold.

Published in:

Proteins, 2005, v. 59, n. 4, p. 864, doi. 10.1002/prot.20420

By:

Levin, Inna;
Miller, Mitchell D.;
Schwarzenbacher, Robert;
McMullan, Daniel;
Abdubek, Polat;
Ambing, Eileen;
Biorac, Tanya;
Cambell, Jamison;
Canaves, Jaume M.;
Chiu, Hsiu-Ju;
Deacon, Ashley M.;
DiDonato, Michael;
Elsliger, Marc-André;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Hale, Joanna;
Hampton, Eric;
Han, Gye Won;
Haugen, Justin

Publication type:

Article

The CCPN data model for NMR spectroscopy: Development of a software pipeline.

Published in:

Proteins, 2005, v. 59, n. 4, p. 687, doi. 10.1002/prot.20449

By:

Vranken, Wim F.;
Boucher, Wayne;
Stevens, Tim J.;
Fogh, Rasmus H.;
Pajon, Anne;
Llinas, Miguel;
Ulrich, Eldon L.;
Markley, John L.;
Ionides, John;
Laue, Ernest D.

Publication type:

Article

Quantifying allosteric effects in proteins.

Published in:

Proteins, 2005, v. 59, n. 4, p. 697, doi. 10.1002/prot.20440

By:

Ming, Dengming;
Wall, Michael E.

Publication type:

Article

Folding pathways for initiator and effector procaspases from computer simulations.

Published in:

Proteins, 2005, v. 59, n. 4, p. 765, doi. 10.1002/prot.20451

By:

Piana, Stefano;
Taylor, Zoe;
Rothlisberger, Ursula

Publication type:

Article

Computation of conformational entropy from protein sequences using the machine-learning method-Application to the study of the relationship between structural conservation and local structural stability.

Published in:

Proteins, 2005, v. 59, n. 4, p. 802, doi. 10.1002/prot.20462

By:

Huang, Shao-Wei;
Hwang, Jenn-Kang

Publication type:

Article

RECOORD: A recalculated coordinate database of 500+ proteins from the PDB using restraints from the BioMagResBank.

Published in:

Proteins, 2005, v. 59, n. 4, p. 662, doi. 10.1002/prot.20408

By:

Nederveen, Aart J.;
Doreleijers, Jurgen F.;
Vranken, Wim;
Miller, Zachary;
Spronk, Chris A.E.M.;
Nabuurs, Sander B.;
Güntert, Peter;
Livny, Miron;
Markley, John L.;
Nilges, Michael;
Ulrich, Eldon L.;
Kaptein, Robert;
Bonvin, Alexandre M.J.J.

Publication type:

Article

Crystal structure of S-adenosylmethionine:tRNA ribosyltransferase-isomerase (QueA) from Thermotoga maritima at 2.0 Å resolution reveals a new fold.

Published in:

Proteins, 2005, v. 59, n. 4, p. 869, doi. 10.1002/prot.20419

By:

Mathews, Irimpan;
Schwarzenbacher, Robert;
McMullan, Daniel;
Abdubek, Polat;
Ambing, Eileen;
Axelrod, Herbert;
Biorac, Tanya;
Canaves, Jaume M.;
Chiu, Hsiu-Ju;
Deacon, Ashley M.;
DiDonato, Michael;
Elsliger, Marc-André;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Hale, Joanna;
Hampton, Eric;
Han, Gye Won;
Haugen, Justin;
Hornsby, Michael

Publication type:

Article

How does nitrous oxide reductase interact with its electron donors?-A docking study.

Published in:

Proteins, 2005, v. 59, n. 4, p. 708, doi. 10.1002/prot.20437

By:

Mattila, Kimmo;
Haltia, Tuomas

Publication type:

Article

Structural characterization of an iron-sulfur cluster assembly protein IscU in a zinc-bound form.

Published in:

Proteins, 2005, v. 59, n. 4, p. 875, doi. 10.1002/prot.20421

By:

Liu, Jinyu;
Oganesyan, Natalia;
Shin, Dong-Hae;
Jancarik, Jarmila;
Yokota, Hisao;
Kim, Rosalind;
Kim, Sung-Hou

Publication type:

Article

High accuracy prediction of β-turns and their types using propensities and multiple alignments.

Published in:

Proteins, 2005, v. 59, n. 4, p. 828, doi. 10.1002/prot.20461

By:

Fuchs, Patrick F.J.;
Alix, Alain J.P.

Publication type:

Article

Assessing precision and accuracy of protein structures derived from NMR data.

Published in:

Proteins, 2005, v. 59, n. 4, p. 655, doi. 10.1002/prot.20499

By:

Snyder, David A.;
Bhattacharya, Aneerban;
Huang, Yuanpeng J.;
Montelione, Gaetano T.

Publication type:

Article

Amphipathic α-helices in proteins: Results from analysis of protein structures.

Published in:

Proteins, 2005, v. 59, n. 4, p. 791, doi. 10.1002/prot.20459

By:

Sharadadevi, Ambure;
Sivakamasundari, Chandrasekaran;
Nagaraj, Ramakrishnan

Publication type:

Article

Does structural and chemical divergence play a role in precluding undesirable protein interactions?

Published in:

Proteins, 2005, v. 59, n. 4, p. 757, doi. 10.1002/prot.20448

By:

Jiménez, José L.

Publication type:

Article

Computational analysis of molecular basis of 1:1 interactions of NRG-1β wild-type and variants with ErbB3 and ErbB4.

Published in:

Proteins, 2005, v. 59, n. 4, p. 742, doi. 10.1002/prot.20443

By:

Luo, Cheng;
Xu, Lingfei;
Zheng, Suxin;
Luo, Xiaomin;
Shen, Jianhua;
Jiang, Hualiang;
Liu, Xifu;
Zhou, Mingdong

Publication type:

Article

Comparative molecular dynamics simulations of HIV-1 integrase and the T66I/M154I mutant: Binding modes and drug resistance to a diketo acid inhibitor.

Published in:

Proteins, 2005, v. 59, n. 4, p. 723, doi. 10.1002/prot.20447

By:

Brigo, Alessandro;
Lee, Keun Woo;
Fogolari, Federico;
Mustata, Gabriela Iurcu;
Briggs, James M.

Publication type:

Article

A structural alphabet for local protein structures: Improved prediction methods.

Published in:

Proteins, 2005, v. 59, n. 4, p. 810, doi. 10.1002/prot.20458

By:

Etchebest, Catherine;
Benros, Cristina;
Hazout, Serge;
de Brevern, Alexandre G.

Publication type:

Article