Works matching IS 08873585 AND DT 2005 AND VI 58 AND IP 2

Results: 28

Quaternary structure is critical for protein display on capsid-like particles (CLPs): Efficient generation of hepatitis B virus CLPs presenting monomeric but not dimeric and tetrameric fluorescent proteins.

Published in:

Proteins, 2005, v. 58, n. 2, p. 478, doi. 10.1002/prot.20312

By:

Vogel, Maren;
Vorreiter, Jolanta;
Nassal, Michael

Publication type:

Article

Crystal structure of the conserved hypothetical protein MPN330 (GI: 1674200) from Mycoplasma pneumoniae.

Published in:

Proteins, 2005, v. 58, n. 2, p. 504, doi. 10.1002/prot.20316

By:

Das, Debanu;
Oganesyan, Natasha;
Yokota, Hisao;
Pufan, Ramona;
Kim, Rosalind;
Kim, Sung-Hou

Publication type:

Article

Identification of amino acids important for target recognition by the DNA:m<sup>5</sup>C methyltransferase M.NgoPII by alanine-scanning mutagenesis of residues at the protein-DNA interface.

Published in:

Proteins, 2005, v. 58, n. 2, p. 263, doi. 10.1002/prot.20297

By:

Radlinska, Monika;
Kondrzycka-Dada, Aneta;
Piekarowicz, Andrzej;
Bujnicki, Janusz M.

Publication type:

Article

Extent of protein-protein interactions and quasi-equivalence in viral capsids.

Published in:

Proteins, 2005, v. 58, n. 2, p. 472, doi. 10.1002/prot.20311

By:

Shepherd, Craig M.;
Reddy, Vijay S.

Publication type:

Article

The solution structure of BmTx3B, a member of the scorpion toxin subfamily α-KTx 16.

Published in:

Proteins, 2005, v. 58, n. 2, p. 489, doi. 10.1002/prot.20322

By:

Wang, Yuefeng;
Chen, Xiang;
Zhang, Naixia;
Wu, Gong;
Wu, Houming

Publication type:

Article

Elucidation of information encoded in tryptophan 140 of staphylococcal nuclease.

Published in:

Proteins, 2005, v. 58, n. 2, p. 271, doi. 10.1002/prot.20333

By:

Hirano, Satoshi;
Kamikubo, Hironari;
Yamazaki, Yoichi;
Kataoka, Mikio

Publication type:

Article

A molecular dynamics study of the structural stability of HIV-1 protease under physiological conditions: The role of Na<sup>+</sup> ions in stabilizing the active site.

Published in:

Proteins, 2005, v. 58, n. 2, p. 450, doi. 10.1002/prot.20304

By:

Kovalskyy, Dmytro;
Dubyna, Volodymyr;
Mark, Alan E.;
Kornelyuk, Alexander

Publication type:

Article

Crystal structure of PH0010 from Pyrococcus horikoshii, which is highly homologous to human AMMECR 1C-terminal region.

Published in:

Proteins, 2005, v. 58, n. 2, p. 501, doi. 10.1002/prot.20315

By:

Tajika, Yosuke;
Sakai, Naoki;
Tamura, Tomohiro;
Yao, Min;
Watanabe, Nobuhisa;
Tanaka, Isao

Publication type:

Article

Receptor rigidity and ligand mobility in trypsin-ligand complexes.

Published in:

Proteins, 2005, v. 58, n. 2, p. 407, doi. 10.1002/prot.20326

By:

Guvench, Olgun;
Price, Daniel J.;
Brooks, Charles L.

Publication type:

Article

Fold recognition by combining sequence profiles derived from evolution and from depth-dependent structural alignment of fragments.

Published in:

Proteins, 2005, v. 58, n. 2, p. 321, doi. 10.1002/prot.20308

By:

Zhou, Hongyi;
Zhou, Yaoqi

Publication type:

Article

Interaction interfaces of protein domains are not topologically equivalent across families within superfamilies: Implications for metabolic and signaling pathways.

Published in:

Proteins, 2005, v. 58, n. 2, p. 339, doi. 10.1002/prot.20319

By:

Rekha, N.;
Machado, S.M.;
Narayanan, C.;
Krupa, A.;
Srinivasan, N.

Publication type:

Article

Predicting protein functional sites with phylogenetic motifs.

Published in:

Proteins, 2005, v. 58, n. 2, p. 309, doi. 10.1002/prot.20321

By:

La, David;
Sutch, Brian;
Livesay, Dennis R.

Publication type:

Article

Design of a data model for developing laboratory information management and analysis systems for protein production.

Published in:

Proteins, 2005, v. 58, n. 2, p. 278, doi. 10.1002/prot.20303

By:

Pajon, Anne;
Ionides, John;
Diprose, Jon;
Fillon, Joël;
Fogh, Rasmus;
Ashton, Alun W.;
Berman, Helen;
Boucher, Wayne;
Cygler, Miroslaw;
Deleury, Emeline;
Esnouf, Robert;
Janin, Joël;
Kim, Rosalind;
Krimm, Isabelle;
Lawson, Catherine L.;
Oeuillet, Eric;
Poupon, Anne;
Raymond, Stéphane;
Stevens, Tim;
van Tilbeurgh, Herman

Publication type:

Article

Structural evidence for variable oligomerization of the N-terminal domain of cyclase-associated protein (CAP).

Published in:

Proteins, 2005, v. 58, n. 2, p. 255, doi. 10.1002/prot.20314

By:

Yusof, Adlina Mohd;
Hu, Nien-Jen;
Wlodawer, Alexander;
Hofmann, Andreas

Publication type:

Article

PhosphaBase: An ontology-driven database resource for protein phosphatases.

Published in:

Proteins, 2005, v. 58, n. 2, p. 290, doi. 10.1002/prot.20325

By:

Wolstencroft, K. J.;
Stevens, R.;
Tabernero, L.;
Brass, A.

Publication type:

Article

MOLE: A data management application based on a protein production data model.

Published in:

Proteins, 2005, v. 58, n. 2, p. 285, doi. 10.1002/prot.20291

By:

Morris, Chris;
Wood, Peter;
Griffiths, Susanne L.;
Wilson, Keith S.;
Ashton, Alun W.

Publication type:

Article

Issues in high-throughput comparative modelling: A case study using the ubiquitin E2 conjugating enzymes.

Published in:

Proteins, 2005, v. 58, n. 2, p. 367, doi. 10.1002/prot.20318

By:

Winn, P.J.;
Battey, J.N.D.;
Schleinkofer, K.;
Banerjee, A.;
Wade, R.C.

Publication type:

Article

Structural classification of thioredoxin-like fold proteins.

Published in:

Proteins, 2005, v. 58, n. 2, p. 376, doi. 10.1002/prot.20329

By:

Qi, Yuan;
Grishin, Nick V.

Publication type:

Article

Rational discovery of a novel interface for a coactivator in the peroxisome proliferator-activated receptor γ: Theoretical implications of impairment in type 2 diabetes mellitus.

Published in:

Proteins, 2005, v. 58, n. 2, p. 418, doi. 10.1002/prot.20266

By:

Shiraki, Takuma;
Kodama, Takashi S.;
Jingami, Hisato;
Kamiya, Narutoshi

Publication type:

Article

A generalized affine gap model significantly improves protein sequence alignment accuracy.

Published in:

Proteins, 2005, v. 58, n. 2, p. 329, doi. 10.1002/prot.20299

By:

Zachariah, Marcus A.;
Crooks, Gavin E.;
Holbrook, Stephen R.;
Brenner, Steven E.

Publication type:

Article

Structure and dynamics of the human pleckstrin DEP domain: Distinct molecular features of a novel DEP domain subfamily.

Published in:

Proteins, 2005, v. 58, n. 2, p. 354, doi. 10.1002/prot.20320

By:

Civera, Concepcion;
Simon, Bernd;
Stier, Gunter;
Sattler, Michael;
Macias, Maria J.

Publication type:

Article

Study of the Villin headpiece folding dynamics by combining coarse-grained Monte Carlo evolution and all-atom molecular dynamics.

Published in:

Proteins, 2005, v. 58, n. 2, p. 459, doi. 10.1002/prot.20313

By:

De Mori, Giacomo M.S.;
Colombo, Giorgio;
Micheletti, Cristian

Publication type:

Article

Topological determinants of protein unfolding rates.

Published in:

Proteins, 2005, v. 58, n. 2, p. 389, doi. 10.1002/prot.20324

By:

Jung, Jaewoon;
Lee, Jooyoung;
Moon, Hie-Tae

Publication type:

Article

Theoretical investigations of prostatic acid phosphatase.

Published in:

Proteins, 2005, v. 58, n. 2, p. 295, doi. 10.1002/prot.20335

By:

Sharma, Satyan;
Päivi Pirilä;
Kaija, Helena;
Porvari, Katja;
Vihko, Pirkko;
Juffer, André H.

Publication type:

Article

Crystal structure of the Co-chaperonin Cpn10 from Thermus thermophilus HB8.

Published in:

Proteins, 2005, v. 58, n. 2, p. 498, doi. 10.1002/prot.20317

By:

Numoto, Nobutaka;
Kita, Akiko;
Miki, Kunio

Publication type:

Article

Analysis of pH-dependent elements in proteins: Geometry and properties of pairs of hydrogen-bonded carboxylic acid side-chains.

Published in:

Proteins, 2005, v. 58, n. 2, p. 396, doi. 10.1002/prot.20328

By:

Wohlfahrt, Gerd

Publication type:

Article

Effect of T-R conformational change on sickle-cell hemoglobin interactions and aggregation.

Published in:

Proteins, 2005, v. 58, n. 2, p. 426, doi. 10.1002/prot.20339

By:

Vaiana, S. M.;
Rotter, M. A.;
Emanuele, A.;
Ferrone, F. A.;
Palma-Vittorelli, M. B.

Publication type:

Article

Characterization of the denaturation of human α-lactalbumin in urea by molecular dynamics simulations.

Published in:

Proteins, 2005, v. 58, n. 2, p. 439, doi. 10.1002/prot.20287

By:

Smith, Lorna J.;
Jones, Rachel M.;
van Gunsteren, Wilfred F.

Publication type:

Article