Works matching IS 08873585 AND DT 2004 AND VI 56 AND IP 2

Results: 24

Exploring structural features of the interaction between the scorpion toxinCnErg1 and ERG K<sup>+</sup> channels.

Published in:

Proteins, 2004, v. 56, n. 2, p. 367, doi. 10.1002/prot.20102

By:

Frénal, Karine;
Xu, Chen-Qi;
Wolff, Nicolas;
Wecker, Karine;
Gurrola, Georgina B.;
Zhu, Shun-Yi;
Chi, Cheng-Wu;
Possani, Lourival D.;
Tytgat, Jan;
Delepierre, Muriel

Publication type:

Article

Towards a structural classification of phosphate binding sites in protein-nucleotide complexes: An automated all-against-all structural comparison using geometric matching.

Published in:

Proteins, 2004, v. 56, n. 2, p. 250, doi. 10.1002/prot.20123

By:

Brakoulias, Andreas;
Jackson, Richard M.

Publication type:

Article

The structural genomics experimental pipeline: Insights from global target lists.

Published in:

Proteins, 2004, v. 56, n. 2, p. 201, doi. 10.1002/prot.20060

By:

O'Toole, Nicholas;
Grabowski, Marek;
Otwinowski, Zbyszek;
Minor, Wladek;
Cygler, Miroslaw

Publication type:

Article

Influence of conservation on calculations of amino acid covariance in multiple sequence alignments.

Published in:

Proteins, 2004, v. 56, n. 2, p. 211, doi. 10.1002/prot.20098

By:

Fodor, Anthony A.;
Aldrich, Richard W.

Publication type:

Article

Structural genomics of Caenorhabditis elegans: Crystal structure of the tropomodulin C-terminal domain.

Published in:

Proteins, 2004, v. 56, n. 2, p. 384, doi. 10.1002/prot.10597

By:

Lu, Shanyun;
Symersky, Jindrich;
Li, Songlin;
Carson, Mike;
Chen, Liqing;
Meehan, Edward;
Luo, Ming

Publication type:

Article

The cis-pro touch-turn: A rare motif preferred at functional sites.

Published in:

Proteins, 2004, v. 56, n. 2, p. 298, doi. 10.1002/prot.20101

By:

Videau, Lizbeth L.;
Arendall, W. Bryan;
Richardson, Jane S.

Publication type:

Article

Crystal structure of a PIN (PilT N-terminus) domain (AF0591) from Archaeoglobus fulgidus at 1.90 Å resolution.

Published in:

Proteins, 2004, v. 56, n. 2, p. 404, doi. 10.1002/prot.20090

By:

Levin, Inna;
Schwarzenbacher, Robert;
Page, Rebecca;
Abdubek, Polat;
Ambing, Eileen;
Biorac, Tanya;
Brinen, Linda S.;
Campbell, Jamison;
Canaves, Jaume M.;
Chiu, Hsiu-Ju;
Dai, Xiaoping;
Deacon, Ashley M.;
DiDonato, Mike;
Elsliger, Marc-André;
Floyd, Ross;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Hampton, Eric;
Jaroszewski, Lukasz

Publication type:

Article

Crystal structure of O-acetylserine sulfhydrylase (TM0665) from Thermotoga maritima at 1.8 Å resolution.

Published in:

Proteins, 2004, v. 56, n. 2, p. 387, doi. 10.1002/prot.20003

By:

Heine, Andreas;
Canaves, Jaume M.;
von Delft, Frank;
Brinen, Linda S.;
Dai, Xiaoping;
Deacon, Ashley M.;
Elsliger, Marc A.;
Eshaghi, Said;
Floyd, Ross;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Guda, Chittibabu;
Jaroszewski, Lukasz;
Karlak, Cathy;
Klock, Heath E.;
Koesema, Eric;
Kovarik, John S.;
Kreusch, Andreas;
Kuhn, Peter

Publication type:

Article

Change in protein flexibility upon complex formation: Analysis of Ras-Raf using molecular dynamics and a molecular framework approach.

Published in:

Proteins, 2004, v. 56, n. 2, p. 322, doi. 10.1002/prot.20116

By:

Gohlke, Holger;
Kuhn, Leslie A.;
Case, David A.

Publication type:

Article

Free energy surfaces of β-hairpin and α-helical peptides generated by replica exchange molecular dynamics with the AGBNP implicit solvent model.

Published in:

Proteins, 2004, v. 56, n. 2, p. 310, doi. 10.1002/prot.20104

By:

Felts, Anthony K.;
Harano, Yuichi;
Gallicchio, Emilio;
Levy, Ronald M.

Publication type:

Article

Characterization of Lys-698 to met substitution in human plasminogen catalytic domain.

Published in:

Proteins, 2004, v. 56, n. 2, p. 277, doi. 10.1002/prot.20070

By:

Terzyan, Simon;
Wakeham, Nancy;
Zhai, Peng;
Rodgers, Karla;
Zhang, Xuejun C.

Publication type:

Article

The molecular origin of the thiamin diphosphate-induced spectral bands of ThDP-dependent enzymes.

Published in:

Proteins, 2004, v. 56, n. 2, p. 338, doi. 10.1002/prot.20115

By:

Kovina, Marina V.;
de Kok, Aart;
Sevostyanova, Irina A.;
Khailova, Ludmila S.;
Belkina, Natalya V.;
Kochetov, German A.

Publication type:

Article

Thermal effects in stretching of Go-like models of titin and secondary structures.

Published in:

Proteins, 2004, v. 56, n. 2, p. 285, doi. 10.1002/prot.20081

By:

Cieplak, Marek;
Hoang, Trinh Xuan;
Robbins, Mark O.

Publication type:

Article

Automatic target selection for structural genomics on eukaryotes.

Published in:

Proteins, 2004, v. 56, n. 2, p. 188, doi. 10.1002/prot.20012

By:

Liu, Jinfeng;
Hegyi, Hedi;
Acton, Thomas B.;
Montelione, Gaetano T.;
Rost, Burkhard

Publication type:

Article

Shift in nucleotide conformational equilibrium contributes to increased rate of catalysis of GpAp versus GpA in barnase.

Published in:

Proteins, 2004, v. 56, n. 2, p. 261, doi. 10.1002/prot.20137

By:

Giraldo, Jesús;
De Maria, Leonardo;
Wodak, Shoshana J.

Publication type:

Article

Crystal structure of PqqC from Klebsiella pneumoniae at 2.1 Å resolution.

Published in:

Proteins, 2004, v. 56, n. 2, p. 401, doi. 10.1002/prot.20085

By:

Schwarzenbacher, Robert;
Stenner-Liewen, Frank;
Liewen, Heike;
Reed, John C.;
Liddington, Robert C.

Publication type:

Article

Predictive reconstruction of the mitochondrial iron-sulfur cluster assembly metabolism: I. The role of the protein pair ferredoxin-ferredoxin reductase (Yah1-Arh1).

Published in:

Proteins, 2004, v. 56, n. 2, p. 354, doi. 10.1002/prot.20110

By:

Alves, Rui;
Herrero, Enrique;
Sorribas, Albert

Publication type:

Article

YbdK is a carboxylate-amine ligase with a γ-glutamyl:Cysteine ligase activity: Crystal structure and enzymatic assays.

Published in:

Proteins, 2004, v. 56, n. 2, p. 376, doi. 10.1002/prot.20103

By:

Lehmann, Christopher;
Doseeva, Victoria;
Pullalarevu, Sadhana;
Krajewski, Wojciech;
Howard, Andrew;
Herzberg, Osnat

Publication type:

Article

Saturation transfer difference (STD) <sup>1</sup>H-NMR experiments and in silico docking experiments to probe the binding of N-acetylneuraminic acid and derivatives to Vibrio cholerae sialidase.

Published in:

Proteins, 2004, v. 56, n. 2, p. 346, doi. 10.1002/prot.20143

By:

Haselhorst, Thomas;
Wilson, Jennifer C.;
Thomson, Robin J.;
McAtamney, Sarah;
Menting, John G.;
Coppel, Ross L.;
von Itzstein, Mark

Publication type:

Article

The protein target list of the Northeast Structural Genomics Consortium.

Published in:

Proteins, 2004, v. 56, n. 2, p. 181, doi. 10.1002/prot.20091

By:

Wunderlich, Zeba;
Acton, Thomas B.;
Liu, Jinfeng;
Kornhaber, Gregory;
Everett, John;
Carter, Phil;
Lan, Ning;
Echols, Nathaniel;
Gerstein, Mark;
Rost, Burkhard;
Montelione, Gaetano T.

Publication type:

Article

Crystal structure of a putative oxalate decarboxylase (TM1287) from Thermotoga maritima at 1.95 Å resolution.

Published in:

Proteins, 2004, v. 56, n. 2, p. 392, doi. 10.1002/prot.20016

By:

Schwarzenbacher, Robert;
von Delft, Frank;
Jaroszewski, Lukasz;
Abdubek, Polat;
Ambing, Eileen;
Biorac, Tanya;
Brinen, Linda S.;
Canaves, Jaume M.;
Cambell, Jamison;
Chiu, Hsiu-Ju;
Dai, Xiaoping;
Deacon, Ashley M.;
DiDonato, Mike;
Elsliger, Marc-André;
Eshagi, Said;
Floyd, Ross;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Hampton, Eric

Publication type:

Article

A structural pattern-based method for protein fold recognition.

Published in:

Proteins, 2004, v. 56, n. 2, p. 222, doi. 10.1002/prot.20073

By:

Taylor, William R.;
Jonassen, Inge

Publication type:

Article

A detailed comparison of current docking and scoring methods on systems of pharmaceutical relevance.

Published in:

Proteins, 2004, v. 56, n. 2, p. 235, doi. 10.1002/prot.20088

By:

Perola, Emanuele;
Walters, W. Patrick;
Charifson, Paul S.

Publication type:

Article

Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 Å resolution.

Published in:

Proteins, 2004, v. 56, n. 2, p. 396, doi. 10.1002/prot.20084

By:

Spraggon, Glen;
Schwarzenbacher, Robert;
Kreusch, Andreas;
McMullan, Daniel;
Brinen, Linda S.;
Canaves, Jaume M.;
Dai, Xiaoping;
Deacon, Ashley M.;
Elsliger, Marc-André;
Eshagi, Said;
Floyd, Ross;
Godzik, Adam;
Grittini, Carina;
Grzechnik, Slawomir K.;
Jaroszewski, Lukasz;
Karlak, Cathy;
Klock, Heath E.;
Koesema, Eric;
Kovarik, John S.;
Kuhn, Peter

Publication type:

Article