Works matching IS 08873585 AND DT 2004 AND VI 54 AND IP 2

Results: 20

Picosecond dynamics of the glutamate receptor in response to agonist-induced vibrational excitation.

Published in:

Proteins, 2004, v. 54, n. 2, p. 231

By:

Minoru Kubo;
Eiji Shiomitsu;
Kei Odai;
Tohru Sugimoto;
Hideo Suzuki

Publication type:

Article

Novel protein and Mg<sup>2+</sup> configurations in the Mg<sup>2+</sup>GDP complex of the SRP GTPase ffh.

Published in:

Proteins, 2004, v. 54, n. 2, p. 222, doi. 10.1002/prot.10598

By:

Pamela J. Focia;
Hena Alam;
Thanh Lu;
Ursula D. Ramirez;
Douglas M. Freymann

Publication type:

Article

Strand-loop-strand motifs: Prediction of hairpins and diverging turns in proteins.

Published in:

Proteins, 2004, v. 54, n. 2, p. 282

By:

Michael Kuhn;
Jens Meiler;
David Baker

Publication type:

Article

Evolutionary trace analysis of scorpion toxins specific for K-channels (The nucleotide sequence data reported in this paper will appear in the GenBank database ( http://www.ncbi.nlm.nih.gov) under the accession numbers AY225779-AY225783 (OcKTx1-5)).

Published in:

Proteins, 2004, v. 54, n. 2, p. 361, doi. 10.1002/prot.10588

By:

Shunyi Zhu;
Isabelle Huys;
Karin Dyason;
Fons Verdonck;
Jan Tytgat

Publication type:

Article

Quantifying the effect of burial of amino acid residues on protein stability.

Published in:

Proteins, 2004, v. 54, n. 2, p. 315

By:

Hongyi Zhou;
Yaoqi Zhou

Publication type:

Article

A new pairwise folding potential based on improved decoy generation and side-chain packing.

Published in:

Proteins, 2004, v. 54, n. 2, p. 303

By:

C. Loose;
J. L. Klepeis;
C. A. Floudas

Publication type:

Article

Phenomenological similarities between protein denaturation and small-molecule dissolution: Insights into the mechanism driving the thermal resistance of globular proteins.

Published in:

Proteins, 2004, v. 54, n. 2, p. 323, doi. 10.1002/prot.10574

By:

Raffaele Ragone

Publication type:

Article

N—HO, O—HO, and C—HO hydrogen bonds in proteinligand complexes: Strong and weak interactions in molecular recognition.

Published in:

Proteins, 2004, v. 54, n. 2, p. 247

By:

Sanjay Sarkhel;
Gautam R. Desiraju

Publication type:

Article

Using evolutionary information for the query and target improves fold recognition.

Published in:

Proteins, 2004, v. 54, n. 2, p. 342

By:

Björn Wallner;
Huisheng Fang;
Tomas Ohlson;
Johannes Frey-Skött;
Arne Elofsson

Publication type:

Article

A Shannon entropy-based filter detects high- quality profileprofile alignments in searches for remote homologues.

Published in:

Proteins, 2004, v. 54, n. 2, p. 351

By:

Emidio Capriotti;
Piero Fariselli;
Ivan Rossi;
Rita Casadio

Publication type:

Article

Crystal structure of the C67A mutant of isopentenyl diphosphate isomerase complexed with a mechanism-based irreversible inhibitor.

Published in:

Proteins, 2004, v. 54, n. 2, p. 216

By:

J. Wouters;
Y. Oudjama;
V. Stalon;
L. Droogmans;
C.D. Poulter

Publication type:

Article

Effective scoring function for protein sequence design.

Published in:

Proteins, 2004, v. 54, n. 2, p. 271, doi. 10.1002/prot.10560

By:

Shide Liang

Publication type:

Article

Solution structure of ADO1, a toxin extracted from the saliva of the assassin bug, Agriosphodrus dohrni (Protein Data Bank coordinate files are available on the Brookhaven Data Bank (PDB code: 1LMR).).

Published in:

Proteins, 2004, v. 54, n. 2, p. 195

By:

Cédric Bernard;
Gerardo Corzo;
Satomi Adachi-Akahane;
Guillaume Foures;
Kazunori Kanemaru;
Yasuo Furukawa;
Terumi Nakajima;
Hervé Darbon

Publication type:

Article

Evaluation of protein fold comparison servers.

Published in:

Proteins, 2004, v. 54, n. 2, p. 260

By:

Marian Novotny;
Dennis Madsen;
Gerard J. Kleywegt

Publication type:

Article

Free energies of binding of polychlorinated biphenyls to the estrogen receptor from a single simulation.

Published in:

Proteins, 2004, v. 54, n. 2, p. 237, doi. 10.1002/prot.10558

By:

Chris Oostenbrink;
Wilfred F. van Gunsteren

Publication type:

Article

Crystal structure of the Escherichia coli YjiA protein suggests a GTP-dependent regulatory function (Certain commercial materials, instruments, and equipment are identified in this article to specify the experimental procedure as completely as possible. In no case does such identification imply a recommendation or endorsement by the National Institute of Standards and Technology nor does it imply that the materials, instruments, or equipment identified is necessarily the best available for the purpose. The accepted SI units of concentration, mol/l, and of unified atomic mass unit, u, have been represented by the symbol M and the symbol Da, respectively, to conform to the conventions of this journal.)

Published in:

Proteins, 2004, v. 54, n. 2, p. 371

By:

Pavel P. Khil;
Galina Obmolova;
Alexey Teplyakov;
Andrew J. Howard;
Gary L. Gilliland;
R. Daniel Camerini-Otero

Publication type:

Article

Type I collagen N-Telopeptides adopt an ordered structure when docked to their helix receptor during fibrillogenesis* (Taken, in part, from a Ph.D. dissertation submitted to the Graduate School of Northwestern University, Evanston, IL 60201, June 2002.).

Published in:

Proteins, 2004, v. 54, n. 2, p. 206

By:

James P. Malone;
Anne George;
Arthur Veis

Publication type:

Article

ProVal: A protein-scoring function for the selection of native and near-native folds.

Published in:

Proteins, 2004, v. 54, n. 2, p. 289

By:

Anders Berglund;
Richard D. Head;
Eric A. Welsh;
Garland R. Marshall

Publication type:

Article

Sequence and structural analysis of cellular retinoic acid-binding proteins reveals a network of conserved hydrophobic interactions.

Published in:

Proteins, 2004, v. 54, n. 2, p. 179

By:

Kannan Gunasekaran;
Arnold T. Hagler;
Lila M. Gierasch

Publication type:

Article

Class-specific correlations between protein folding rate, structure-derived, and sequence-derived descriptors.

Published in:

Proteins, 2004, v. 54, n. 2, p. 333

By:

Igor B. Kuznetsov;
Shalom Rackovsky

Publication type:

Article