Works matching IS 08873585 AND DT 1997 AND VI 29 AND IP S1

Results: 31

Protein folds from pair interactions: A blind test in fold recognition.

Published in:

Proteins, 1997, v. 29, n. S1, p. 129, doi. 10.1002/(SICI)1097-0134(1997)1+<129::AID-PROT17>3.0.CO;2-Q

By:

Flöckner, Hannes;
Domingues, Francisco S.;
Sippl, Manfred J.

Publication type:

Article

CASP2 molecular docking predictions with the LIGIN software.

Published in:

Proteins, 1997, v. 29, n. S1, p. 210, doi. 10.1002/(SICI)1097-0134(1997)1+<210::AID-PROT28>3.0.CO;2-Q

By:

Sobolev, Vladimir;
Moallem, Theodore M.;
Wade, Rebecca C.;
Vriend, Gert;
Edelman, Marvin

Publication type:

Article

Criteria for evaluating protein structures derived from comparative modeling.

Published in:

Proteins, 1997, v. 29, n. S1, p. 7, doi. 10.1002/(SICI)1097-0134(1997)1+<7::AID-PROT3>3.0.CO;2-O

By:

Venclovas, Česlovas;
Zemla, Adam;
Fidelis, Krzysztof;
Moult, John

Publication type:

Article

Handling context-sensitivity in protein structures using graph theory: Bona fide prediction.

Published in:

Proteins, 1997, v. 29, n. S1, p. 43, doi. 10.1002/(SICI)1097-0134(1997)1+<43::AID-PROT7>3.0.CO;2-P

By:

Samudrala, Ram;
Moult, John

Publication type:

Article

CASP2 experiences with docking flexible ligands using F LEXX.

Published in:

Proteins, 1997, v. 29, n. S1, p. 221, doi. 10.1002/(SICI)1097-0134(1997)1+<221::AID-PROT30>3.0.CO;2-O

By:

Kramer, Bernd;
Rarey, Matthias;
Lengauer, Thomas

Publication type:

Article

A retrospective analysis of CASP2 threading predictions.

Published in:

Proteins, 1997, v. 29, n. S1, p. 83, doi. 10.1002/(SICI)1097-0134(1997)1+<83::AID-PROT12>3.0.CO;2-N

By:

Marchler-Bauer, Aron;
Levitt, Michael;
Bryant, Stephen H.

Publication type:

Article

Ab initio protein folding simulations with genetic algorithms: Simulations on the complete sequence of small proteins.

Published in:

Proteins, 1997, v. 29, n. S1, p. 179, doi. 10.1002/(SICI)1097-0134(1997)1+<179::AID-PROT23>3.0.CO;2-K

By:

Pedersen, Jan T.;
Moult, John

Publication type:

Article

Fold recognition using predicted secondary structure sequences and hidden Markov models of protein folds.

Published in:

Proteins, 1997, v. 29, n. S1, p. 123, doi. 10.1002/(SICI)1097-0134(1997)1+<123::AID-PROT16>3.0.CO;2-Q

By:

Di Francesco, Valentina;
Geetha, V.;
Garnier, Jean;
Munson, Peter J.

Publication type:

Article

Critical evaluation of the research docking program for the CASP2 challenge.

Published in:

Proteins, 1997, v. 29, n. S1, p. 205, doi. 10.1002/(SICI)1097-0134(1997)1+<205::AID-PROT27>3.0.CO;2-R

By:

Hart, Trevor N.;
Ness, Steven R.;
Read, Randy J.

Publication type:

Article

Critical assessment of methods of protein structure prediction (CASP): Round II.

Published in:

Proteins, 1997, v. 29, n. S1, p. 2, doi. 10.1002/(SICI)1097-0134(1997)1+<2::AID-PROT2>3.0.CO;2-T

By:

Moult, John;
Hubbard, Tim;
Bryant, Stephen H.;
Fidelis, Krzysztof;
Pedersen, Jan T.

Publication type:

Article

Protein modeling by multiple sequence threading and distance geometry.

Published in:

Proteins, 1997, v. 29, n. S1, p. 38, doi. 10.1002/(SICI)1097-0134(1997)1+<38::AID-PROT6>3.0.CO;2-K

By:

Aszódi, András;
Munro, Robin E.J.;
Taylor, William R.

Publication type:

Article

Measures of threading specificity and accuracy.

Published in:

Proteins, 1997, v. 29, n. S1, p. 74, doi. 10.1002/(SICI)1097-0134(1997)1+<74::AID-PROT11>3.0.CO;2-O

By:

Marchler-Bauer, Aron;
Bryant, Stephen H.

Publication type:

Article

Analysis of the predicted structures of domain 1 of protein g3 (T0030) and NK-lysin (T0042).

Published in:

Proteins, 1997, v. 29, n. S1, p. 172, doi. 10.1002/(SICI)1097-0134(1997)1+<172::AID-PROT22>3.0.CO;2-K

By:

Osguthorpe, D.J.

Publication type:

Article

Fold assignments for amino acid sequences of the CASP2 experiment.

Published in:

Proteins, 1997, v. 29, n. S1, p. 113, doi. 10.1002/(SICI)1097-0134(1997)1+<113::AID-PROT15>3.0.CO;2-R

By:

Rice, Danny W.;
Fischer, Daniel;
Weiss, Robert;
Eisenberg, David

Publication type:

Article

Evaluation of the CASP2 docking section.

Published in:

Proteins, 1997, v. 29, n. S1, p. 198, doi. 10.1002/(SICI)1097-0134(1997)1+<198::AID-PROT26>3.0.CO;2-I

By:

Dixon, J. Scott

Publication type:

Article

Numerical criteria for the evaluation of ab initio predictions of protein structure.

Published in:

Proteins, 1997, v. 29, n. S1, p. 140, doi. 10.1002/(SICI)1097-0134(1997)1+<140::AID-PROT19>3.0.CO;2-O

By:

Zemla, Adam;
Venclovas, Česlovas;
Reinhardt, Astrid;
Fidelis, Krzysztof;
Hubbard, Tim J.

Publication type:

Article

Editorial.

Published in:

Proteins, 1997, v. 29, n. S1, p. 1, doi. 10.1002/(SICI)1097-0134(1997)1+<1::AID-PROT1>3.0.CO;2-U

By:

Lattman, Eaton E.

Publication type:

Article

Homology modeling with internal coordinate mechanics: Deformation zone mapping and improvements of models via conformational search.

Published in:

Proteins, 1997, v. 29, n. S1, p. 29, doi. 10.1002/(SICI)1097-0134(1997)1+<29::AID-PROT5>3.0.CO;2-J

By:

Abagyan, Ruben;
Batalov, Serge;
Cardozo, Timothy;
Totrov, Maxim;
Webber, Jeremy;
Zhou, Yingyao

Publication type:

Article

Model building by comparison: A combination of expert knowledge and computer automation.

Published in:

Proteins, 1997, v. 29, n. S1, p. 59, doi. 10.1002/(SICI)1097-0134(1997)1+<59::AID-PROT9>3.0.CO;2-J

By:

Bates, Paul A.;
Jackson, Richard M.;
Sternberg, Michael J.E.

Publication type:

Article

Analysis of comparative modeling predictions for CASP2 targets 1, 3, 9, and 17.

Published in:

Proteins, 1997, v. 29, n. S1, p. 68, doi. 10.1002/(SICI)1097-0134(1997)1+<68::AID-PROT10>3.0.CO;2-P

By:

Harrison, Robert W.;
Reed, Charles C.;
Weber, Irene T.

Publication type:

Article

Blind predictions of local protein structure in CASP2 targets using the I-sites library.

Published in:

Proteins, 1997, v. 29, n. S1, p. 167, doi. 10.1002/(SICI)1097-0134(1997)1+<167::AID-PROT21>3.0.CO;2-L

By:

Bystroff, Christopher;
Baker, David

Publication type:

Article

Distant homology recognition using structural classification of proteins.

Published in:

Proteins, 1997, v. 29, n. S1, p. 105, doi. 10.1002/(SICI)1097-0134(1997)1+<105::AID-PROT14>3.0.CO;2-S

By:

Murzin, Alexey G.;
Bateman, Alex

Publication type:

Article

Better 1D predictions by experts with machines.

Published in:

Proteins, 1997, v. 29, n. S1, p. 192, doi. 10.1002/(SICI)1097-0134(1997)1+<192::AID-PROT25>3.0.CO;2-I

By:

Rost, Burkhard

Publication type:

Article

Predicting protein structure using hidden Markov models.

Published in:

Proteins, 1997, v. 29, n. S1, p. 134, doi. 10.1002/(SICI)1097-0134(1997)1+<134::AID-PROT18>3.0.CO;2-P

By:

Karplus, Kevin;
Sjölander, Kimmen;
Barrett, Christian;
Cline, Melissa;
Haussler, David;
Hughey, Richard;
Holm, Liisa;
Sander, Chris

Publication type:

Article

Flexible protein-ligand docking by global energy optimization in internal coordinates.

Published in:

Proteins, 1997, v. 29, n. S1, p. 215, doi. 10.1002/(SICI)1097-0134(1997)1+<215::AID-PROT29>3.0.CO;2-Q

By:

Totrov, Maxim;
Abagyan, Ruben

Publication type:

Article

Assessment of comparative modeling in CASP2.

Published in:

Proteins, 1997, v. 29, n. S1, p. 14, doi. 10.1002/(SICI)1097-0134(1997)1+<14::AID-PROT4>3.0.CO;2-O

By:

Martin, Andrew C. R.;
MacArthur, Malcolm W.;
Thornton, Janet M.

Publication type:

Article

Evaluation of comparative protein structure modeling by MODELLER-3.

Published in:

Proteins, 1997, v. 29, n. S1, p. 50, doi. 10.1002/(SICI)1097-0134(1997)1+<50::AID-PROT8>3.0.CO;2-S

By:

Sánchez, Roberto;
Šali, Andrej

Publication type:

Article

CASP2: Report on ab initio predictions.

Published in:

Proteins, 1997, v. 29, n. S1, p. 151, doi. 10.1002/(SICI)1097-0134(1997)1+<151::AID-PROT20>3.0.CO;2-M

By:

Lesk, Arthur M.

Publication type:

Article

Evaluation of GRAMM low-resolution docking methodology on the hemagglutinin-antibody complex.

Published in:

Proteins, 1997, v. 29, n. S1, p. 226, doi. 10.1002/(SICI)1097-0134(1997)1+<226::AID-PROT31>3.0.CO;2-O

By:

Vakser, Ilya A.

Publication type:

Article

Competitive assessment of protein fold recognition and alignment accuracy.

Published in:

Proteins, 1997, v. 29, n. S1, p. 92, doi. 10.1002/(SICI)1097-0134(1997)1+<92::AID-PROT13>3.0.CO;2-M

By:

Levitt, Michael

Publication type:

Article

Successful ab initio prediction of the tertiary structure of NK-lysin using multiple sequences and recognized supersecondary structural motifs.

Published in:

Proteins, 1997, v. 29, n. S1, p. 185, doi. 10.1002/(SICI)1097-0134(1997)1+<185::AID-PROT24>3.0.CO;2-J

By:

Jones, David T.

Publication type:

Article