Works matching IS 03051048 AND DT 2023 AND VI 51 AND IP 9

Results: 18

Locating, tracing and sequencing multiple expanded genetic letters in complex DNA context via a bridge-base approach.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. e52, doi. 10.1093/nar/gkad218

By:

Wang, Honglei;
Zhu, Wuyuan;
Wang, Chao;
Li, Xiaohuan;
Wang, Luying;
Huo, Bianbian;
Mei, Hui;
Zhu, Anlian;
Zhang, Guisheng;
Li, Lingjun

Publication type:

Article

Structural basis for guide RNA selection by the RESC1–RESC2 complex.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4602, doi. 10.1093/nar/gkad217

By:

Dolce, Luciano G;
Nesterenko, Yevheniia;
Walther, Leon;
Weis, Félix;
Kowalinski, Eva

Publication type:

Article

RNA interactome capture in Escherichia coli globally identifies RNA-binding proteins.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4572, doi. 10.1093/nar/gkad216

By:

Stenum, Thomas Søndergaard;
Kumar, Ankith D;
Sandbaumhüter, Friederike A;
Kjellin, Jonas;
Jerlström-Hultqvist, Jon;
Andrén, Per E;
Koskiniemi, Sanna;
Jansson, Erik T;
Holmqvist, Erik

Publication type:

Article

Rolling circle extension-assisted loop-mediated isothermal amplification (Rol-LAMP) method for locus-specific and visible detection of RNA N<sup>6</sup>-methyladenosine.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. e51, doi. 10.1093/nar/gkad200

By:

Li, Jiexin;
Zhou, Jiawang;
Xia, Yan;
Rui, Yalan;
Yang, Xianyuan;
Xie, Guoyou;
Jiang, Guanmin;
Wang, Hongsheng

Publication type:

Article

A new method to synthesize multiple gRNA libraries and functional mapping of mammalian H3K4me3 regions.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. e50, doi. 10.1093/nar/gkad198

By:

Pan, Chen;
Li, Ran;
Shui, Liyan;
Xiao, Zhengyun;
Wang, Yali;
Zhu, Jing;
Wu, Chao;
Zhang, Long;
Jia, Junling;
Zheng, Min

Publication type:

Article

BESST: a novel LncRNA knockout strategy with less genome perturbance.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. e49, doi. 10.1093/nar/gkad197

By:

Zhang, Shikuan;
Chen, Yue;
Dong, Kunzhe;
Zhao, Yiwan;
Wang, Yanzhi;
Wang, Songmao;
Qu, Chen;
Xu, Naihan;
Xie, Weidong;
Zeng, Chunyu;
Lyu, Qing Rex;
Zhang, Yaou

Publication type:

Article

A hybrid structure determination approach to investigate the druggability of the nucleocapsid protein of SARS-CoV-2.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4555, doi. 10.1093/nar/gkad195

By:

Padroni, Giacomo;
Bikaki, Maria;
Novakovic, Mihajlo;
Wolter, Antje C;
Rüdisser, Simon H;
Gossert, Alvar D;
Leitner, Alexander;
Allain, Frederic H-T

Publication type:

Article

Genome-encoded ABCF factors implicated in intrinsic antibiotic resistance in Gram-positive bacteria: VmlR2, Ard1 and CplR.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4536, doi. 10.1093/nar/gkad193

By:

Obana, Nozomu;
Takada, Hiraku;
Crowe-McAuliffe, Caillan;
Iwamoto, Mizuki;
Egorov, Artyom A;
Wu, Kelvin J Y;
Chiba, Shinobu;
Murina, Victoriia;
Paternoga, Helge;
Tresco, Ben I C;
Nomura, Nobuhiko;
Myers, Andrew G;
Atkinson, Gemma C;
Wilson, Daniel N;
Hauryliuk, Vasili

Publication type:

Article

A red light-triggered chemical tool for sequence-specific alkylation of G-quadruplex and I-motif DNA.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4112, doi. 10.1093/nar/gkad189

By:

Cadoni, Enrico;
De Paepe, Lessandro;
Colpaert, Gertjan;
Tack, Ruben;
Waegeman, Dries;
Manicardi, Alex;
Madder, Annemieke

Publication type:

Article

Biochemical characterisation of Mer3 helicase interactions and the protection of meiotic recombination intermediates.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4363, doi. 10.1093/nar/gkad175

By:

Altmannova, Veronika;
Firlej, Magdalena;
Müller, Franziska;
Janning, Petra;
Rauleder, Rahel;
Rousova, Dorota;
Schäffler, Andreas;
Bange, Tanja;
Weir, John R

Publication type:

Article

Excessive transcription-replication conflicts are a vulnerability of BRCA1-mutant cancers.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4341, doi. 10.1093/nar/gkad172

By:

Patel, Parasvi S;
Algouneh, Arash;
Krishnan, Rehna;
Reynolds, John J;
Nixon, Kevin C J;
Hao, Jun;
Lee, Jihoon;
Feng, Yue;
Fozil, Chehronai;
Stanic, Mia;
Yerlici, Talya;
Su, Peiran;
Soares, Fraser;
Liedtke, Elisabeth;
Prive, Gil;
Baider, Gary D;
Pujana, Miquel Angel;
Mekhail, Karim;
He, Housheng Hansen;
Hakem, Anne

Publication type:

Article

Site-directed biochemical analyses reveal that the switchable C-terminus of Rpc31 contributes to RNA polymerase III transcription initiation.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4223, doi. 10.1093/nar/gkac1163

By:

Shekhar, Arvind Chandra;
Sun, Yuan-En;
Khoo, Seok-Kooi;
Lin, Yu-Chun;
Malau, Ester Betaria;
Chang, Wei-Hau;
Chen, Hung-Ta

Publication type:

Article

Oncogenic YAP mediates changes in chromatin accessibility and activity that drive cell cycle gene expression and cell migration.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4266, doi. 10.1093/nar/gkad107

By:

Fetiva, Maria Camila;
Liss, Franziska;
Gertzmann, Dörthe;
Thomas, Julius;
Gantert, Benedikt;
Vogl, Magdalena;
Sira, Nataliia;
Weinstock, Grit;
Kneitz, Susanne;
Ade, Carsten P;
Gaubatz, Stefan

Publication type:

Article

Linker histone H1 modulates defense priming and immunity in plants.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4252, doi. 10.1093/nar/gkad106

By:

Sheikh, Arsheed H;
Nawaz, Kashif;
Tabassum, Naheed;
Almeida-Trapp, Marilia;
Mariappan, Kiruthiga G;
Alhoraibi, Hanna;
Rayapuram, Naganand;
Aranda, Manuel;
Groth, Martin;
Hirt, Heribert

Publication type:

Article

HPV integration generates a cellular super-enhancer which functions as ecDNA to regulate genome-wide transcription.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4237, doi. 10.1093/nar/gkad105

By:

Tian, Rui;
Huang, Zheying;
Li, Lifang;
Yuan, Jingping;
Zhang, Qinghua;
Meng, Lirong;
Lang, Bin;
Hong, Yongfeng;
Zhong, Chaoyue;
Tian, Xun;
Cui, Zifeng;
Jin, Zhuang;
Liu, Jiashuo;
Huang, Zhaoyue;
Wang, Yuyan;
Chen, Ye;
Hu, Zheng

Publication type:

Article

Nearest-neighbor parameters for the prediction of RNA duplex stability in diverse in vitro and cellular-like crowding conditions.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4101, doi. 10.1093/nar/gkad020

By:

Ghosh, Saptarshi;
Takahashi, Shuntaro;
Banerjee, Dipanwita;
Ohyama, Tatsuya;
Endoh, Tamaki;
Tateishi-Karimata, Hisae;
Sugimoto, Naoki

Publication type:

Article

BACH1 deficiency prevents neointima formation and maintains the differentiated phenotype of vascular smooth muscle cells by regulating chromatin accessibility.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4284, doi. 10.1093/nar/gkad120

By:

Guo, Jieyu;
Qiu, Jingjing;
Jia, Mengping;
Li, Qinhan;
Wei, Xiangxiang;
Li, Liliang;
Pan, Qi;
Jin, Jiayu;
Ge, Fei;
Ma, Siyu;
He, Yunquan;
Lin, Jiayi;
Li, Yongbo;
Ma, Jinghua;
Jiang, Nan;
Zhi, Xiuling;
Jiang, Lindi;
Zhang, Jianyi;
Osto, Elena;
Jing, Qing

Publication type:

Article

SirA inhibits the essential DnaA:DnaD interaction to block helicase recruitment during Bacillus subtilis sporulation.

Published in:

Nucleic Acids Research, 2023, v. 51, n. 9, p. 4302, doi. 10.1093/nar/gkac1060

By:

Winterhalter, Charles;
Stevens, Daniel;
Fenyk, Stepan;
Pelliciari, Simone;
Marchand, Elie;
Soultanas, Panos;
Ilangovan, Aravindan;
Murray, Heath

Publication type:

Article