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Correction to 'STRIDE: accurately decomposing and integrating spatial transcriptomics using single-cell RNA sequencing'.
- Published in:
- 2022
- Publication type:
- Correction Notice
Formation of non-base-pairing DNA microgels using directed phase transition of amphiphilic monomers.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4187, doi. 10.1093/nar/gkac232
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- Publication type:
- Article
Coordinated changes in gene expression, H1 variant distribution and genome 3D conformation in response to H1 depletion.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3892, doi. 10.1093/nar/gkac226
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- Publication type:
- Article
Eukaryotic tRNA sequences present conserved and amino acid-specific structural signatures.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4100, doi. 10.1093/nar/gkac222
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- Publication type:
- Article
Correction to 'The nucleoporin Gle1 activates DEAD-box protein 5 (Dbp5) by promoting ATP binding and accelerating rate limiting phosphate release'.
- Published in:
- 2022
- Publication type:
- Correction Notice
Nonmodular oscillator and switch based on RNA decay drive regeneration of multimodal gene expression.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3693, doi. 10.1093/nar/gkac217
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- Publication type:
- Article
TREX1 degrades the 3′ end of the small DNA oligonucleotide products of nucleotide excision repair in human cells.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3974, doi. 10.1093/nar/gkac214
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- Publication type:
- Article
hnRNP G/RBMX enhances HPV16 E2 mRNA splicing through a novel splicing enhancer and inhibits production of spliced E7 oncogene mRNAs.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3867, doi. 10.1093/nar/gkac213
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- Publication type:
- Article
NMR-derived secondary structure of the full-length Ox40 mRNA 3′UTR and its multivalent binding to the immunoregulatory RBP Roquin.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4083, doi. 10.1093/nar/gkac212
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- Publication type:
- Article
Retraction of 'MEPE/OF45 protects cells from DNA damage induced killing via stabilizing CHK1'.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4200, doi. 10.1093/nar/gkac211
- Publication type:
- Article
Sequence and tissue targeting specificity of ZFP36L2 reveals Elavl2 as a novel target with co-regulation potential.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4068, doi. 10.1093/nar/gkac209
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- Publication type:
- Article
Negative catalysis by the editing domain of class I aminoacyl-tRNA synthetases.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4029, doi. 10.1093/nar/gkac207
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- Publication type:
- Article
Synthetic 3′-UTR valves for optimal metabolic flux control in Escherichia coli.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4171, doi. 10.1093/nar/gkac206
- By:
- Publication type:
- Article
Editorial Expression of Concern on article 'Alternative splicing modulation mediated by G-quadruplex structures in MALAT1 lncRNA'.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4199, doi. 10.1093/nar/gkac205
- Publication type:
- Article
DNA polymerase of bacteriophage YerA41 replicates its T-modified DNA in a primer-independent manner.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3985, doi. 10.1093/nar/gkac203
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- Publication type:
- Article
Compositional complementarity between genomic RNA and coat proteins in positive-sense single-stranded RNA viruses.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4054, doi. 10.1093/nar/gkac202
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- Publication type:
- Article
Imperfect guide-RNA (igRNA) enables CRISPR single-base editing with ABE and CBE.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4161, doi. 10.1093/nar/gkac201
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- Publication type:
- Article
SWAN pathway-network identification of common aneuploidy-based oncogenic drivers.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3673, doi. 10.1093/nar/gkac200
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- Publication type:
- Article
H3K56 deacetylation and H2A.Z deposition are required for aberrant heterochromatin spreading.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3852, doi. 10.1093/nar/gkac196
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- Publication type:
- Article
Mechanisms of substrate recognition and N6-methyladenosine demethylation revealed by crystal structures of ALKBH5–RNA complexes.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4148, doi. 10.1093/nar/gkac195
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- Publication type:
- Article
ZWC complex-mediated SPT5 phosphorylation suppresses divergent antisense RNA transcription at active gene promoters.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3835, doi. 10.1093/nar/gkac193
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- Publication type:
- Article
CRISPR–Cas9 gRNA efficiency prediction: an overview of predictive tools and the role of deep learning.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3616, doi. 10.1093/nar/gkac192
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- Publication type:
- Article
Oxidative stress-CBP axis modulates MOB1 acetylation and activates the Hippo signaling pathway.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3817, doi. 10.1093/nar/gkac189
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- Publication type:
- Article
PARP inhibitors trap PARP2 and alter the mode of recruitment of PARP2 at DNA damage sites.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3958, doi. 10.1093/nar/gkac188
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- Publication type:
- Article
Machine learning from Pseudomonas aeruginosa transcriptomes identifies independently modulated sets of genes associated with known transcriptional regulators.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3658, doi. 10.1093/nar/gkac187
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- Publication type:
- Article
Targeting DNA polymerase to DNA double-strand breaks reduces DNA deletion size and increases templated insertions generated by CRISPR/Cas9.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3944, doi. 10.1093/nar/gkac186
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- Publication type:
- Article
Human TDP1, APE1 and TREX1 repair 3′-DNA–peptide/protein cross-links arising from abasic sites in vitro.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3638, doi. 10.1093/nar/gkac185
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- Publication type:
- Article
Molecular basis for human mitochondrial tRNA m3C modification by alternatively spliced METTL8.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4012, doi. 10.1093/nar/gkac184
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- Publication type:
- Article
Rec8 Cohesin-mediated Axis-loop chromatin architecture is required for meiotic recombination.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3799, doi. 10.1093/nar/gkac183
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- Publication type:
- Article
Long promoter sequences form higher-order G-quadruplexes: an integrative structural biology study of c-Myc, k-Ras and c-Kit promoter sequences.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4127, doi. 10.1093/nar/gkac182
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- Publication type:
- Article
Xenogeneic nucleoid-associated EnrR thwarts H-NS silencing of bacterial virulence with unique DNA binding.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3777, doi. 10.1093/nar/gkac180
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- Publication type:
- Article
Telomerase RNA TERC and the PI3K-AKT pathway form a positive feedback loop to regulate cell proliferation independent of telomerase activity.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3764, doi. 10.1093/nar/gkac179
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- Publication type:
- Article
Nuclear receptor activation shapes spatial genome organization essential for gene expression control: lessons learned from the vitamin D receptor.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3745, doi. 10.1093/nar/gkac178
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- Publication type:
- Article
Facultative heterochromatin formation in rDNA is essential for cell survival during nutritional starvation.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3727, doi. 10.1093/nar/gkac175
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- Publication type:
- Article
Genetic code degeneracy is established by the decoding center of the ribosome.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4113, doi. 10.1093/nar/gkac171
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- Publication type:
- Article
Hydrogen-deuterium exchange mass spectrometry of Mtr4 with diverse RNAs reveals substrate-dependent dynamics and interfaces in the arch.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 4042, doi. 10.1093/nar/gkac170
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- Publication type:
- Article
nucleoporin Gle1 activates DEAD-box protein 5 (Dbp5) by promoting ATP binding and accelerating rate limiting phosphate release.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3998, doi. 10.1093/nar/gkac164
- By:
- Publication type:
- Article
ZMYM2 restricts 53BP1 at DNA double-strand breaks to favor BRCA1 loading and homologous recombination.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3922, doi. 10.1093/nar/gkac160
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- Publication type:
- Article
STRIDE: accurately decomposing and integrating spatial transcriptomics using single-cell RNA sequencing.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e42, doi. 10.1093/nar/gkac150
- By:
- Publication type:
- Article
Burkholderia cenocepacia iron starvation σ factor, OrbS, possesses an on-board iron sensor.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3709, doi. 10.1093/nar/gkac137
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- Publication type:
- Article
Polymerase theta-helicase promotes end joining by stripping single-stranded DNA-binding proteins and bridging DNA ends.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3911, doi. 10.1093/nar/gkac119
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- Publication type:
- Article
Family D DNA polymerase interacts with GINS to promote CMG-helicase in the archaeal replisome.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. 3601, doi. 10.1093/nar/gkab799
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- Publication type:
- Article
Covariation of viral recombination with single nucleotide variants during virus evolution revealed by CoVaMa.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e41, doi. 10.1093/nar/gkab1259
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- Publication type:
- Article
Photocaged amplified FRET nanoflares: spatiotemporal controllable of mRNA-powered nanomachines for precise and sensitive microRNA imaging in live cells.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e40, doi. 10.1093/nar/gkab1258
- By:
- Publication type:
- Article
PAGEANT: personal access to genome and analysis of natural traits.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e39, doi. 10.1093/nar/gkab1245
- By:
- Publication type:
- Article
Development of a genome-targeting mutator for the adaptive evolution of microbial cells.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e38, doi. 10.1093/nar/gkab1244
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- Publication type:
- Article
Foster thy young: enhanced prediction of orphan genes in assembled genomes.
- Published in:
- Nucleic Acids Research, 2022, v. 50, n. 7, p. e37, doi. 10.1093/nar/gkab1238
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- Publication type:
- Article