Works matching IS 03051048 AND DT 2016 AND VI 44 AND IP 17

Results: 46

Corrigendum.

Published in:: Nucleic Acids Research, 2016, v. 44, n. 17, p. 8512, doi. 10.1093/nar/gkw618
Publication type:: Article

Impact of donor-recipient phylogenetic distance on bacterial genome transplantation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8501, doi. 10.1093/nar/gkw688

By:

Labroussaa, Fabien;
Lebaudy, Anne;
Baby, Vincent;
Gourgues, Géraldine;
Matteau, Dominick;
Vashee, Sanjay;
Sirand-Pugnet, Pascal;
Rodrigue, Sébastien;
Lartigue, Carole

Publication type:

Article

A microbial sensor for organophosphate hydrolysis exploiting an engineered specificity switch in a transcription factor.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8490, doi. 10.1093/nar/gkw687

By:

Jha, Ramesh K.;
Kern, Theresa L.;
Youngchang Kim;
Tesar, Christine;
Jedrzejczak, Robert;
Joachimiak, Andrzej;
Strauss, Charlie E. M.

Publication type:

Article

Conformation-dependent restraints for polynucleotides: I. Clustering of the geometry of the phosphodiester group.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8479, doi. 10.1093/nar/gkw717

By:

Kowiel, Marcin;
Brzezinski, Dariusz;
Jaskolski, Mariusz

Publication type:

Article

Structure of a human pre-40S particle points to a role for RACK1 in the final steps of 18S rRNA processing.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8465, doi. 10.1093/nar/gkw714

By:

Larburu, Natacha;
Montellese, Christian;
O'Donohue, Marie-Françoise;
Kutay, Ulrike;
Gleizes, Pierre-Emmanuel;
Plisson-Chastang, Célia

Publication type:

Article

Effect of magnesium ions on the structure of DNA thin films: an infrared spectroscopy study.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8456, doi. 10.1093/nar/gkw696

By:

Serec, Kristina;
Babć, Sanja Dolanski;
Podgornik, Rudolf;
Tomić, Silvia

Publication type:

Article

YphC and YsxC GTPases assist the maturation of the central protuberance, GTPase associated region and functional core of the 50S ribosomal subunit.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8442, doi. 10.1093/nar/gkw678

By:

Xiaodan Ni;
Davis, Joseph H.;
Jain, Nikhil;
Benlekbir, Samir;
McArthur, Andrew G.;
Rubinstein, John L.;
Britton, Robert A.;
Williamson, James R.;
Ortega, Joaquin

Publication type:

Article

RNAlien - Unsupervised RNA family model construction.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8433, doi. 10.1093/nar/gkw558

By:

Eggenhofer, Florian;
Hofacker, Ivo L.;
Siederdissen, Christian Höner zu

Publication type:

Article

Principles of start codon recognition in eukaryotic translation initiation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8425, doi. 10.1093/nar/gkw534

By:

Lind, Christoffer;
Åqvist, Johan

Publication type:

Article

Crystal structure of a poly(rA) staggered zipper at acidic pH: evidence that adenine N1 protonation mediates parallel double helix formation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8417, doi. 10.1093/nar/gkw526

By:

Gleghorn, Michael L.;
Jianbo Zhao;
Turner, Douglas H.;
Maquat, Lynne E.

Publication type:

Article

Structural features of influenza A virus panhandle RNA enabling the activation of RIG-I independently of 5′-triphosphate.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8407, doi. 10.1093/nar/gkw525

By:

Mi-Kyung Lee;
Hee-Eun Kim;
Eun-Byeol Park;
Janghyun Lee;
Ki-Hun Kim;
Kyungeun Lim;
Seoyun Yum;
Young-Hoon Lee;
Suk-Jo Kang;
Joon-Hwa Lee;
Byong-Seok Choi

Publication type:

Article

Identification of distinct biological functions for four 3′-5′ RNA polymerases.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8395, doi. 10.1093/nar/gkw681

By:

Yicheng Long;
Abad, Maria G.;
Olson, Erik D.;
Carrillo, Elisabeth Y.;
Jackman, Jane E.

Publication type:

Article

G-quadruplex and G-rich sequence stimulate Pif1p-catalyzed downstream duplex DNA unwinding through reducing waiting time at ss/dsDNA junction.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8385, doi. 10.1093/nar/gkw669

By:

Bo Zhang;
Wen-Qiang Wu;
Na-Nv Liu;
Xiao-Lei Duan;
Ming Li;
Shuo-Xing Dou;
Xi-Miao Hou;
Xu-Guang Xi

Publication type:

Article

DNA binding proteins explore multiple local configurations during docking via rapid rebinding.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8376, doi. 10.1093/nar/gkw666

By:

Ganji, Mahipal;
Docter, Margreet;
Le Grice, Stuart F. J.;
Abbondanzieri, Elio A.

Publication type:

Article

Poly(ADP-ribose) polymers regulate DNA topoisomerase I (Top1) nuclear dynamics and camptothecin sensitivity in living cells.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8363, doi. 10.1093/nar/gkw665

By:

Das, Subhendu K.;
Rehman, Ishita;
Ghosh, Arijit;
Sengupta, Souvik;
Majumdar, Papiya;
Jana, Biman;
Das, Benu Brata

Publication type:

Article

Conservation of context-dependent splicing activity in distant Muscleblind homologs.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8352, doi. 10.1093/nar/gkw735

By:

Oddo, Julia C.;
Saxena, Tanvi;
McConnell, Ona L.;
Berglund, J. Andrew;
Wang, Eric T.

Publication type:

Article

The RNA-binding protein Gemin5 binds directly to the ribosome and regulates global translation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8335, doi. 10.1093/nar/gkw702

By:

Francisco-Velilla, Rosario;
Fernandez-Chamorro, Javier;
Ramajo, Jorge;
Martinez-Salas, Encarnación

Publication type:

Article

Replication-dependent and independent mechanisms for the chromosome-coupled persistence of a selfish genome.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8302, doi. 10.1093/nar/gkw694

By:

Yen-Ting Liu;
Keng-Ming Chang;
Chien-Hui Ma;
Makkuni Jayaram

Publication type:

Article

Selective single cell isolation for genomics using microraft arrays.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8292, doi. 10.1093/nar/gkw700

By:

Welch, Joshua D.;
Williams, Lindsay A.;
DiSalvo, Matthew;
Brandt, Alicia T.;
Marayati, Raoud;
Sims, Christopher E.;
Allbritton, Nancy L.;
Prins, Jan F.;
Jen Jen Yeh;
Jones, Corbin D.

Publication type:

Article

Chromosome territory relocation during DNA repair requires nuclear myosin 1 recruitment to chromatin mediated by ϒ-H2AX signaling.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8272, doi. 10.1093/nar/gkw573

By:

Kulashreshtha, Mugdha;
Mehta, Ishita S.;
Kumar, Pradeep;
Rao, Basuthkar J.

Publication type:

Article

Homology directed repair is unaffected by the absence of siRNAs in Drosophila melanogaster.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8261, doi. 10.1093/nar/gkw570

By:

Schmidts, Ines;
Böttcher, Romy;
Mirkovic-Hösle, Milijana;
Förstemann, Klaus

Publication type:

Article

PCNA tool belts and polymerase bridges form during translesion synthesis.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8250, doi. 10.1093/nar/gkw563

By:

Boehm, Elizabeth M.;
Spies, Maria;
Washington, M. Todd

Publication type:

Article

Ctp1-dependent clipping and resection of DNA double-strand breaks by Mre11 endonuclease complex are not genetically separable.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8241, doi. 10.1093/nar/gkw557

By:

Jensen, Kristi L.;
Russell, Paul

Publication type:

Article

Strand displacement synthesis by yeast DNA polymerase ε.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8229, doi. 10.1093/nar/gkw556

By:

Ganai, Rais A.;
Xiao-Ping Zhang;
Heyer, Wolf-Dietrich;
Johansson, Erik

Publication type:

Article

Unexpected DNA context-dependence identifies a new determinant of Chi recombination hotspots.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8216, doi. 10.1093/nar/gkw541

By:

Taylor, Andrew F.;
Amundsen, Susan K.;
Smith, Gerald R.

Publication type:

Article

The Shu complex promotes error-free tolerance of alkylation-induced base excision repair products.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8199, doi. 10.1093/nar/gkw535

By:

Godin, Stephen K.;
Zhuying Zhang;
Herken, Benjamin W.;
Westmoreland, James W.;
Lee, Alison G.;
Mihalevic, Michael J.;
Zhongxun Yu;
Sobol, Robert W.;
Resnick, Michael A.;
Bernstein, Kara A.

Publication type:

Article

Frequent occurrence of large duplications at reciprocal genomic rearrangement breakpoints in multiple myeloma and other tumors.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8189, doi. 10.1093/nar/gkw527

By:

Demchenko, Yulia;
Roschke, Anna;
Wei-Dong Chen;
Yan Asmann;
Bergsagel, Peter Leif;
Kuehl, Walter Michael

Publication type:

Article

Synergy and antagonism in regulation of recombinant human INO80 chromatin remodeling complex.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8179, doi. 10.1093/nar/gkw509

By:

Willhoft, Oliver;
Bythell-Douglas, Rohan;
McCormack, Elizabeth A.;
Wigley, Dale B.

Publication type:

Article

ZFP57 maintains the parent-of-origin-specific expression of the imprinted genes and differentially affects non-imprinted targets in mouse embryonic stem cells.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8165, doi. 10.1093/nar/gkw505

By:

Riso, Vincenzo;
Cammisa, Marco;
Kukreja, Harpreet;
Anvar, Zahra;
Verde, Gaetano;
Sparago, Angela;
Acurzio, Basilia;
Lad, Shraddha;
Lonardo, Enza;
Sankar, Aditya;
Helin, Kristian;
Feil, Robert;
Fico, Annalisa;
Angelini, Claudia;
Grimaldi, Giovanna;
Riccio, Andrea

Publication type:

Article

FOXA1 potentiates lineage-specific enhancer activation through modulating TET1 expression and function.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8153, doi. 10.1093/nar/gkw498

By:

Yang, Yeqing A.;
Zhao, Jonathan C.;
Ka-wing Fong;
Jung Kim;
Shangze Li;
Chunxiao Song;
Bing Song;
Bin Zheng;
Chuan He;
Jindan Yu

Publication type:

Article

Heat shock represses rRNA synthesis by inactivation of TIF-IA and lncRNA-dependent changes in nucleosome positioning.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8144, doi. 10.1093/nar/gkw496

By:

Zhongliang Zhao;
Dammert, Marcel A.;
Hoppe, Sven;
Bierhoff, Holger;
Grummt, Ingrid

Publication type:

Article

G9a promotes proliferation and inhibits cell cycle exit during myogenic differentiation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8129, doi. 10.1093/nar/gkw483

By:

Rao, Vinay Kumar;
Jin Rong Ow;
Shankar, Shilpa Rani;
Bharathy, Narendra;
Manikandan, Jayapal;
Yaju Wang;
Taneja, Reshma

Publication type:

Article

BAP18 coactivates androgen receptor action and promotes prostate cancer progression.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8112, doi. 10.1093/nar/gkw472

By:

Shiying Sun;
Xinping Zhong;
Chunyu Wang;
Hongmiao Sun;
Shengli Wang;
Tingting Zhou;
Renlong Zou;
Lin Lin;
Ning Sun;
Ge Sun;
Yi Wu;
Botao Wang;
Xiaoyu Song;
Liu Cao;
Yue Zhao

Publication type:

Article

Human mutations affect the epigenetic/bookmarking function of HNF1B.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8097, doi. 10.1093/nar/gkw467

By:

Lerner, Jonathan;
Bagattin, Alessia;
Verdeguer, Francisco;
Makinistoglu, Munevver P.;
Garbay, Serge;
Felix, Tristan;
Heidet, Laurence;
Pontoglio, Marco

Publication type:

Article

Preferential extension of short telomeres induced by low extracellular pH.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8086, doi. 10.1093/nar/gkw464

By:

Yuanlong Ge;
Shu Wu;
Yong Xue;
Jun Tao;
Feng Li;
Yanlian Chen;
Haiying Liu;
Wenbin Ma;
Junjiu Huang;
Yong Zhao

Publication type:

Article

The interplay between chromosome stability and cell cycle control explored through gene-gene interaction and computational simulation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8073, doi. 10.1093/nar/gkw715

By:

Frumkin, Jesse P.;
Patra, Biranchi N.;
Sevold, Anthony;
Ganguly, Kumkum;
Patel, Chaya;
Yoon, Stephanie;
Schmid, Molly B.;
Ray, Animesh

Publication type:

Article

Backmasking in the yeast genome: encoding overlapping information for protein-coding and RNA degradation.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8065, doi. 10.1093/nar/gkw683

By:

Cakiroglu, S. Aylin;
Zaugg, Judith B.;
Luscombe, Nicholas M.

Publication type:

Article

Evoking picomolar binding in RNA by a single phosphorodithioate linkage.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8052, doi. 10.1093/nar/gkw725

By:

Abeydeera, N. Dinuka;
Egli, Martin;
Cox, Nehemiah;
Mercier, Karen;
Conde, Jonas Nascimento;
Pallan, Pradeep S.;
Mizurini, Daniella M.;
Sierant, Malgorzata;
Hibti, Fatima-Ezzahra;
Hassell, Tom;
Tianzhi Wang;
Feng-Wu Liu;
Hong-Min Liu;
Martinez, Carlos;
Sood, Anil K.;
Lybrand, Terry P.;
Frydman, Chiraz;
Monteiro, Robson Q.;
Gomer, Richard H.;
Nawrot, Barbara

Publication type:

Article

Origins of tmRNA: the missing link in the birth of protein synthesis?

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8041, doi. 10.1093/nar/gkw693

By:

Macé, Kevin;
Gillet, Reynald

Publication type:

Article

An integrated, structure- and energy-based view of the genetic code.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8020, doi. 10.1093/nar/gkw608

By:

Grosjean, Henri;
Westhof, Eric

Publication type:

Article

3.9 Å structure of the nucleosome core particle determined by phase-plate cryo-EM.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 8013, doi. 10.1093/nar/gkw708

By:

Chua, Eugene Y. D.;
Vogirala, Vinod K.;
Inian, Oviya;
Wong, Andrew S. W.;
Nordenskiöold, Lars;
Plitzko, Juergen M.;
Danev, Radostin;
Sandin, Sara

Publication type:

Article

Next-generation RNA-based fluorescent biosensors enable anaerobic detection of cyclic di-GMP.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 1, doi. 10.1093/nar/gkw580

By:

Wang, Xin C.;
Wilson, Stephen C.;
Hammond, Ming C.

Publication type:

Article

Identifying gene regulatory network rewiring using latent differential graphical models.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 1, doi. 10.1093/nar/gkw581

By:

Dechao Tian;
Quanquan Gu;
Jian Ma

Publication type:

Article

Engineering of synthetic, stress-responsive yeast promoters.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 1, doi. 10.1093/nar/gkw553

By:

Rajkumar, Arun S.;
Guodong Liu;
Bergenholm, David;
Arsovska, Dushica;
Kristensen, Mette;
Nielsen, Jens;
Jensen, Michael K.;
Keasling, Jay D.

Publication type:

Article

Combination probes with intercalating anchors and proximal fluorophores for DNA and RNA detection.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 1, doi. 10.1093/nar/gkw579

By:

Jieqiong Qiu;
Wilson, Adam;
El-Sagheer, Afaf H.;
Brown, Tom

Publication type:

Article

Prior knowledge transfer across transcriptional data sets and technologies using compositional statistics yields new mislabelled ovarian cell line.

Published in:

Nucleic Acids Research, 2016, v. 44, n. 17, p. 1, doi. 10.1093/nar/gkw578

By:

Blayney, Jaine K.;
Davison, Timothy;
McCabe, Nuala;
Walker, Steven;
Keating, Karen;
Delaney, Thomas;
Greenan, Caroline;
Williams, Alistair R.;
McCluggage, W. Glenn;
Capes-Davis, Amanda;
Harkin, D. Paul;
Gourley, Charlie;
Kennedy, Richard D.

Publication type:

Article