Works matching IS 03051048 AND DT 2014 AND VI 42 AND IP 17

Results: 41

Catalytic activities of Werner protein are affected by adduction with 4-hydroxy-2-nonenal.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11119

By:

Czerwińska, Jolanta;
Poznański, Jarosław;
Dębski, Janusz;
Bukowy, Zuzanna;
Bohr, Vilhelm A.;
Tudek, Barbara;
Speina, Elżbieta

Publication type:

Article

Transcriptional complexity and roles of Fra-1/AP-1 at the uPA/Plau locus in aggressive breast cancer.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11011, doi. 10.1093/nar/gku814

By:

Moquet-Torcy, Gabriel;
Tolza, Claire;
Piechaczyk, Marc;
Jariel-Encontre, Isabelle

Publication type:

Article

Direct regulation of topoisomerase activity by a nucleoid-associated protein.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11156, doi. 10.1093/nar/gku804

By:

Ghosh, Soumitra;
Mallick, Bratati;
Nagaraja, Valakunja

Publication type:

Article

Requirements for 5′dRP/AP lyase activity in Ku.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11136, doi. 10.1093/nar/gku796

By:

Strande, Natasha T.;
Carvajal-Garcia, Juan;
Hallett, Ryan A.;
Waters, Crystal A.;
Roberts, Steven A.;
Strom, Christina;
Kuhlman, Brian;
Ramsden, Dale A.

Publication type:

Article

The multiMiR R package and database: integration of microRNA–target interactions along with their disease and drug associations.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e133, doi. 10.1093/nar/gku631

By:

Ru, Yuanbin;
Kechris, Katerina J.;
Tabakoff, Boris;
Hoffman, Paula;
Radcliffe, Richard A.;
Bowler, Russell;
Mahaffey, Spencer;
Rossi, Simona;
Calin, George A.;
Bemis, Lynne;
Theodorescu, Dan

Publication type:

Article

Processing of the seven valine tRNAs in Escherichia coli involves novel features of RNase P.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11166, doi. 10.1093/nar/gku758

By:

Agrawal, Ankit;
Mohanty, Bijoy K.;
Kushner, Sidney R.

Publication type:

Article

MixMir: microRNA motif discovery from gene expression data using mixed linear models.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e135, doi. 10.1093/nar/gku672

By:

Diao, Liyang;
Marcais, Antoine;
Norton, Scott;
Chen, Kevin C.

Publication type:

Article

3′LIFE: a functional assay to detect miRNA targets in high-throughput.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e132, doi. 10.1093/nar/gku626

By:

Wolter, Justin M.;
Kotagama, Kasuen;
Pierre-Bez, Alexandra C.;
Firago, Mari;
Mangone, Marco

Publication type:

Article

Multifaceted role of the Topo IIIα–RMI1-RMI2 complex and DNA2 in the BLM-dependent pathway of DNA break end resection.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11083, doi. 10.1093/nar/gku803

By:

Daley, James M.;
Chiba, Tamara;
Xue, Xiaoyu;
Niu, Hengyao;
Sung, Patrick

Publication type:

Article

Arabidopsis MRG domain proteins bridge two histone modifications to elevate expression of flowering genes.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10960, doi. 10.1093/nar/gku781

By:

Xu, Yifeng;
Gan, Eng-Seng;
Zhou, Jie;
Wee, Wan-Yi;
Zhang, Xiaoyu;
Ito, Toshiro

Publication type:

Article

Arabidopsis SEPALLATA proteins differ in cooperative DNA-binding during the formation of floral quartet-like complexes.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10927, doi. 10.1093/nar/gku755

By:

Jetha, Khushboo;
Theißen, Günter;
Melzer, Rainer

Publication type:

Article

The spontaneous replication error and the mismatch discrimination mechanisms of human DNA polymerase β.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11233, doi. 10.1093/nar/gku789

By:

Koag, Myong-Chul;
Nam, Kwangho;
Lee, Seongmin

Publication type:

Article

A dynamic CTCF chromatin binding landscape promotes DNA hydroxymethylation and transcriptional induction of adipocyte differentiation.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10943, doi. 10.1093/nar/gku780

By:

Dubois-Chevalier, Julie;
Oger, Frédérik;
Dehondt, Hélène;
Firmin, François F.;
Gheeraert, Céline;
Staels, Bart;
Lefebvre, Philippe;
Eeckhoute, Jérôme

Publication type:

Article

Control of transcription elongation by GreA determines rate of gene expression in Streptococcus pneumoniae.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10987, doi. 10.1093/nar/gku790

By:

Yuzenkova, Yulia;
Gamba, Pamela;
Herber, Martijn;
Attaiech, Laetitia;
Shafeeq, Sulman;
Kuipers, Oscar P.;
Klumpp, Stefan;
Zenkin, Nikolay;
Veening, Jan-Willem

Publication type:

Article

Broad-host-range vector system for synthetic biology and biotechnology in cyanobacteria.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e136, doi. 10.1093/nar/gku673

By:

Taton, Arnaud;
Unglaub, Federico;
Wright, Nicole E.;
Zeng, Wei Yue;
Paz-Yepes, Javier;
Brahamsha, Bianca;
Palenik, Brian;
Peterson, Todd C.;
Haerizadeh, Farzad;
Golden, Susan S.;
Golden, James W.

Publication type:

Article

Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11180, doi. 10.1093/nar/gku787

By:

Wang, Minshi;
Anikin, Leonid;
Pestov, Dimitri G.

Publication type:

Article

The CRISPR-associated Cas4 protein Pcal_0546 from Pyrobaculum calidifontis contains a [2Fe-2S] cluster: crystal structure and nuclease activity.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11144, doi. 10.1093/nar/gku797

By:

Lemak, Sofia;
Nocek, Boguslaw;
Beloglazova, Natalia;
Skarina, Tatiana;
Flick, Robert;
Brown, Greg;
Joachimiak, Andrzej;
Savchenko, Alexei;
Yakunin, Alexander F.

Publication type:

Article

Characterization of three mycobacterial DinB (DNA polymerase IV) paralogs highlights DinB2 as naturally adept at ribonucleotide incorporation.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11056, doi. 10.1093/nar/gku752

By:

Ordonez, Heather;
Uson, Maria Loressa;
Shuman, Stewart

Publication type:

Article

Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10903, doi. 10.1093/nar/gku806

By:

Zhou, Huanbin;
Liu, Bo;
Weeks, Donald P.;
Spalding, Martin H.;
Yang, Bing

Publication type:

Article

Creating and validating cis-regulatory maps of tissue-specific gene expression regulation.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11000, doi. 10.1093/nar/gku801

By:

O'Connor, Timothy R.;
Bailey, Timothy L.

Publication type:

Article

Wellington: a novel method for the accurate identification of digital genomic footprints from DNase-seq data.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11272, doi. 10.1093/nar/gku727

By:

Piper, Jason;
Elze, Markus C.;
Cauchy, Pierre;
Cockerill, Peter N.;
Bonifer, Constanze;
Ott, Sascha

Publication type:

Article

Synonymous codon bias and functional constraint on GC3-related DNA backbone dynamics in the prokaryotic nucleoid.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10915, doi. 10.1093/nar/gku811

By:

Babbitt, Gregory A.;
Alawad, Mohammed A.;
Schulze, Katharina V.;
Hudson, André O.

Publication type:

Article

Gammaretrovirus mRNA expression is mediated by a novel, bipartite post-transcriptional regulatory element.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11092, doi. 10.1093/nar/gku798

By:

Pilkington, Guy R.;
Purzycka, Katarzyna J.;
Bear, Jenifer;
Le Grice, Stuart F. J.;
Felber, Barbara K.

Publication type:

Article

Translation inhibitors cause abnormalities in ribosome profiling experiments.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e134, doi. 10.1093/nar/gku671

By:

Gerashchenko, Maxim V.;
Gladyshev, Vadim N.

Publication type:

Article

Solution structure and intramolecular exchange of methyl-cytosine binding domain protein 4 (MBD4) on DNA suggests a mechanism to scan for mCpG/TpG mismatches.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11218, doi. 10.1093/nar/gku782

By:

Walavalkar, Ninad M.;
Cramer, Jason M.;
Buchwald, William A.;
Scarsdale, J. Neel;
Williams, David C.

Publication type:

Article

Yeast mitochondrial RNAP conformational changes are regulated by interactions with the mitochondrial transcription factor.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11246, doi. 10.1093/nar/gku795

By:

Drakulic, Srdja;
Wang, Liping;
Cuéllar, Jorge;
Guo, Qing;
Velázquez, Gilberto;
Martín-Benito, Jaime;
Sousa, Rui;
Valpuesta, José M.

Publication type:

Article

Computational identification of RNA functional determinants by three-dimensional quantitative structure–activity relationships.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11261, doi. 10.1093/nar/gku816

By:

Blanchet, Marc-Frédérick;
St-Onge, Karine;
Lisi, Véronique;
Robitaille, Julie;
Hamel, Sylvie;
Major, François

Publication type:

Article

Distinct tmRNA sequence elements facilitate RNase R engagement on rescued ribosomes for selective nonstop mRNA decay.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11192, doi. 10.1093/nar/gku802

By:

Venkataraman, Krithika;
Zafar, Hina;
Karzai, A. Wali

Publication type:

Article

Nucleic Acids Research: Editorial Board.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 17, p. ii, doi. 10.1093/nar/gku031
Publication type:: Article

Mechanism of retinoic acid-induced transcription: histone code, DNA oxidation and formation of chromatin loops.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11040, doi. 10.1093/nar/gku823

By:

Zuchegna, Candida;
Aceto, Fabiana;
Bertoni, Alessandra;
Romano, Antonella;
Perillo, Bruno;
Laccetti, Paolo;
Gottesman, Max E.;
Avvedimento, Enrico V.;
Porcellini, Antonio

Publication type:

Article

The ubiquitin-selective chaperone Cdc48/p97 associates with Ubx3 to modulate monoubiquitylation of histone H2B.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10975, doi. 10.1093/nar/gku786

By:

Bonizec, Mélanie;
Hérissant, Lucas;
Pokrzywa, Wojciech;
Geng, Fuqiang;
Wenzel, Sabine;
Howard, Gregory C.;
Rodriguez, Paco;
Krause, Sabine;
Tansey, William P.;
Hoppe, Thorsten;
Dargemont, Catherine

Publication type:

Article

NF-κB directly mediates epigenetic deregulation of common microRNAs in Epstein-Barr virus-mediated transformation of B-cells and in lymphomas.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11025, doi. 10.1093/nar/gku826

By:

Vento-Tormo, Roser;
Rodríguez-Ubreva, Javier;
Lisio, Lorena Di;
Islam, Abul B. M. M. K.;
Urquiza, Jose M.;
Hernando, Henar;
López-Bigas, Nuria;
Shannon-Lowe, Claire;
Martínez, Nerea;
Montes-Moreno, Santiago;
Piris, Miguel A.;
Ballestar, Esteban

Publication type:

Article

MBNL proteins and their target RNAs, interaction and splicing regulation.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10873, doi. 10.1093/nar/gku767

By:

Konieczny, Patryk;
Stepniak-Konieczna, Ewa;
Sobczak, Krzysztof

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 17, p. i, doi. 10.1093/nar/gku008
Publication type:: Article

CRISPR–Cas9-assisted recombineering in Lactobacillus reuteri.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e131, doi. 10.1093/nar/gku623

By:

Oh, Jee-Hwan;
van Pijkeren, Jan-Peter

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 17, p. iii, doi. 10.1093/nar/gku054
Publication type:: Article

Redundancy of mammalian Y family DNA polymerases in cellular responses to genomic DNA lesions induced by ultraviolet light.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11071, doi. 10.1093/nar/gku779

By:

Jansen, Jacob G.;
Temviriyanukul, Piya;
Wit, Niek;
Delbos, Frédéric;
Reynaud, Claude-Agnès;
Jacobs, Heinz;
de Wind, Niels

Publication type:

Article

Inducible, tightly regulated and growth condition-independent transcription factor in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. e130, doi. 10.1093/nar/gku616

By:

Ottoz, Diana S.M.;
Rudolf, Fabian;
Stelling, Joerg

Publication type:

Article

The yeast PHO5 promoter: from single locus to systems biology of a paradigm for gene regulation through chromatin.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 10888, doi. 10.1093/nar/gku784

By:

Korber, Philipp;
Barbaric, Slobodan

Publication type:

Article

Direct binding of the Alu binding protein dimer SRP9/14 to 40S ribosomal subunits promotes stress granule formation and is regulated by Alu RNA.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11203, doi. 10.1093/nar/gku822

By:

Berger, A.;
Ivanova, E.;
Gareau, C.;
Scherrer, A.;
Mazroui, R.;
Strub, K.

Publication type:

Article

An evolutionarily conserved interaction of tumor suppressor protein Pdcd4 with the poly(A)-binding protein contributes to translation suppression by Pdcd4.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 17, p. 11107, doi. 10.1093/nar/gku800

By:

Fehler, Olesja;
Singh, Priyanka;
Haas, Astrid;
Ulrich, Diana;
Müller, Jan P.;
Ohnheiser, Johanna;
Klempnauer, Karl-Heinz

Publication type:

Article