Works matching IS 03051048 AND DT 2014 AND VI 42 AND IP 11

Results: 68

Oligonucleotide-based strategies to combat polyglutamine diseases.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6787, doi. 10.1093/nar/gku385

By:

Fiszer, Agnieszka;
Krzyzosiak, Wlodzimierz J.

Publication type:

Article

TET1 is a maintenance DNA demethylase that prevents methylation spreading in differentiated cells.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6956, doi. 10.1093/nar/gku372

By:

Jin, Chunlei;
Lu, Yue;
Jelinek, Jaroslav;
Liang, Shoudan;
Estecio, Marcos R.H.;
Barton, Michelle Craig;
Issa, Jean-Pierre J.

Publication type:

Article

Non-inhibited miRNAs shape the cellular response to anti-miR.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6945, doi. 10.1093/nar/gku344

By:

Androsavich, John R.;
Chau, B. Nelson

Publication type:

Article

A Sub-Element in PRE enhances nuclear export of intronless mRNAs by recruiting the TREX complex via ZC3H18.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7305, doi. 10.1093/nar/gku350

By:

Chi, Binkai;
Wang, Ke;
Du, Yanhua;
Gui, Bin;
Chang, Xingya;
Wang, Lantian;
Fan, Jing;
Chen, She;
Wu, Xudong;
Li, Guohui;
Cheng, Hong

Publication type:

Article

A forward genetic screen reveals essential and non-essential RNAi factors in Paramecium tetraurelia.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7268, doi. 10.1093/nar/gku223

By:

Marker, Simone;
Carradec, Quentin;
Tanty, Véronique;
Arnaiz, Olivier;
Meyer, Eric

Publication type:

Article

Identification of non-coding RNAs with a new composite feature in the Hybrid Random Forest Ensemble algorithm.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e93, doi. 10.1093/nar/gku325

By:

Lertampaiporn, Supatcha;
Thammarongtham, Chinae;
Nukoolkit, Chakarida;
Kaewkamnerdpong, Boonserm;
Ruengjitchatchawalya, Marasri

Publication type:

Article

SIP1/NHERF2 enhances estrogen receptor alpha transactivation in breast cancer cells.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6885, doi. 10.1093/nar/gku311

By:

Meneses-Morales, Ivan;
Tecalco-Cruz, Angeles C.;
Barrios-García, Tonatiuh;
Gómez-Romero, Vania;
Trujillo-González, Isis;
Reyes-Carmona, Sandra;
García-Zepeda, Eduardo;
Méndez-Enríquez, Erika;
Cervantes-Roldán, Rafael;
Pérez-Sánchez, Víctor;
Recillas-Targa, Félix;
Mohar-Betancourt, Alejandro;
León-Del-Río, Alfonso

Publication type:

Article

Hydroxyl-radical-induced oxidation of 5-methylcytosine in isolated and cellular DNA.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7450, doi. 10.1093/nar/gku334

By:

Madugundu, Guru S.;
Cadet, Jean;
Wagner, J. Richard

Publication type:

Article

Functional redundancy between the transcriptional activation domains of E2A is mediated by binding to the KIX domain of CBP/p300.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7370, doi. 10.1093/nar/gku206

By:

Denis, Christopher M.;
Langelaan, David N.;
Kirlin, Alyssa C.;
Chitayat, Seth;
Munro, Kim;
Spencer, Holly L.;
LeBrun, David P.;
Smith, Steven P.

Publication type:

Article

The interaction of MYC with the trithorax protein ASH2L promotes gene transcription by regulating H3K27 modification.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6901, doi. 10.1093/nar/gku312

By:

Ullius, Andrea;
Lüscher-Firzlaff, Juliane;
Costa, Ivan G.;
Walsemann, Gesa;
Forst, Alexandra H.;
Gusmao, Eduardo G.;
Kapelle, Karsten;
Kleine, Henning;
Kremmer, Elisabeth;
Vervoorts, Jörg;
Lüscher, Bernhard

Publication type:

Article

Absence/presence calling in microarray-based CGH experiments with non-model organisms.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e94, doi. 10.1093/nar/gku343

By:

Jonker, Martijs J.;
de Leeuw, Wim C.;
Marinković, Marino;
Wittink, Floyd R. A.;
Rauwerda, Han;
Bruning, Oskar;
Ensink, Wim A.;
Fluit, Ad C.;
Boel, C. H.;
Jong, Mark de;
Breit, Timo M.

Publication type:

Article

Wiring miRNAs to pathways: a topological approach to integrate miRNA and mRNA expression profiles.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e96, doi. 10.1093/nar/gku354

By:

Calura, Enrica;
Martini, Paolo;
Sales, Gabriele;
Beltrame, Luca;
Chiorino, Giovanna;
D’Incalci, Maurizio;
Marchini, Sergio;
Romualdi, Chiara

Publication type:

Article

Distinct nucleic acid interaction properties of HIV-1 nucleocapsid protein precursor NCp15 explain reduced viral infectivity.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7145, doi. 10.1093/nar/gku335

By:

Wang, Wei;
Naiyer, Nada;
Mitra, Mithun;
Li, Jialin;
Williams, Mark C.;
Rouzina, Ioulia;
Gorelick, Robert J.;
Wu, Zhengrong;
Musier-Forsyth, Karin

Publication type:

Article

HIV-1 DIS stem loop forms an obligatory bent kissing intermediate in the dimerization pathway.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7281, doi. 10.1093/nar/gku332

By:

Mundigala, Hansini;
Michaux, Jonathan B.;
Feig, Andrew L.;
Ennifar, Eric;
Rueda, David

Publication type:

Article

Insights into how Spt5 functions in transcription elongation and repressing transcription coupled DNA repair.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7069, doi. 10.1093/nar/gku333

By:

Li, Wentao;
Giles, Cristina;
Li, Shisheng

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 11, p. i, doi. 10.1093/nar/gku015
Publication type:: Article

CRISPR/Cas9 systems have off-target activity with insertions or deletions between target DNA and guide RNA sequences.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7473, doi. 10.1093/nar/gku402

By:

Lin, Yanni;
Cradick, Thomas J.;
Brown, Matthew T.;
Deshmukh, Harshavardhan;
Ranjan, Piyush;
Sarode, Neha;
Wile, Brian M.;
Vertino, Paula M.;
Stewart, Frank J.;
Bao, Gang

Publication type:

Article

Genome-wide analysis of Alu editability.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6876, doi. 10.1093/nar/gku414

By:

Bazak, Lily;
Levanon, Erez Y.;
Eisenberg, Eli

Publication type:

Article

Identification of a large protein network involved in epigenetic transmission in replicating DNA of embryonic stem cells.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6972, doi. 10.1093/nar/gku374

By:

Aranda, Sergi;
Rutishauser, Dorothea;
Ernfors, Patrik

Publication type:

Article

Biochemical characterization of a cancer-associated E109K missense variant of human exonuclease 1.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7096, doi. 10.1093/nar/gku419

By:

Bregenhorn, Stephanie;
Jiricny, Josef

Publication type:

Article

De novo detection of differentially bound regions for ChIP-seq data using peaks and windows: controlling error rates correctly.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e95, doi. 10.1093/nar/gku351

By:

Lun, Aaron T.L.;
Smyth, Gordon K.

Publication type:

Article

Specificity determinants for the two tRNA substrates of the cyclodipeptide synthase AlbC from Streptomyces noursei.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7247, doi. 10.1093/nar/gku348

By:

Moutiez, Mireille;
Seguin, Jérôme;
Fonvielle, Matthieu;
Belin, Pascal;
Jacques, Isabelle Béatrice;
Favry, Emmanuel;
Arthur, Michel;
Gondry, Muriel

Publication type:

Article

Programmable DNA-binding proteins from Burkholderia provide a fresh perspective on the TALE-like repeat domain.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7436, doi. 10.1093/nar/gku329

By:

Lange, Orlando de;
Wolf, Christina;
Dietze, Jörn;
Elsaesser, Janett;
Morbitzer, Robert;
Lahaye, Thomas

Publication type:

Article

Cross-species gene-family fluctuations reveal the dynamics of horizontal transfers.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6850, doi. 10.1093/nar/gku378

By:

Grilli, Jacopo;
Romano, Mariacristina;
Bassetti, Federico;
Cosentino Lagomarsino, Marco

Publication type:

Article

Analysis of tetra- and hepta-nucleotides motifs promoting -1 ribosomal frameshifting in Escherichia coli.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7210, doi. 10.1093/nar/gku386

By:

Sharma, Virag;
Prère, Marie-Françoise;
Canal, Isabelle;
Firth, Andrew E.;
Atkins, John F.;
Baranov, Pavel V.;
Fayet, Olivier

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 11, p. iii, doi. 10.1093/nar/gku048
Publication type:: Article

Haloarcula hispanica CRISPR authenticates PAM of a target sequence to prime discriminative adaptation.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7226

By:

Li, Ming;
Wang, Rui;
Xiang, Hua

Publication type:

Article

DDX6 regulates sequestered nuclear CUG-expanded DMPK-mRNA in dystrophia myotonica type 1.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7186, doi. 10.1093/nar/gku352

By:

Pettersson, Olof J.;
Aagaard, Lars;
Andrejeva, Diana;
Thomsen, Rune;
Jensen, Thomas G.;
Damgaard, Christian K.

Publication type:

Article

The strength of the template effect attracting nucleotides to naked DNA.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7409, doi. 10.1093/nar/gku314

By:

Kervio, Eric;
Claasen, Birgit;
Steiner, Ulrich E.;
Richert, Clemens

Publication type:

Article

Exosomes in human semen carry a distinctive repertoire of small non-coding RNAs with potential regulatory functions.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7290, doi. 10.1093/nar/gku347

By:

Vojtech, Lucia;
Woo, Sangsoon;
Hughes, Sean;
Levy, Claire;
Ballweber, Lamar;
Sauteraud, Renan P.;
Strobl, Johanna;
Westerberg, Katharine;
Gottardo, Raphael;
Tewari, Muneesh;
Hladik, Florian

Publication type:

Article

Nucleosome eviction and multiple co-factor binding predict estrogen-receptor-alpha-associated long-range interactions.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6935

By:

He, Chao;
Wang, Xiaowo;
Zhang, Michael Q.

Publication type:

Article

Efficient chromosomal gene modification with CRISPR/cas9 and PCR-based homologous recombination donors in cultured Drosophila cells.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. e89, doi. 10.1093/nar/gku289

By:

Böttcher, Romy;
Hollmann, Manuel;
Merk, Karin;
Nitschko, Volker;
Obermaier, Christina;
Philippou-Massier, Julia;
Wieland, Isabella;
Gaul, Ulrike;
Förstemann, Klaus

Publication type:

Article

Genomic imprinting, methylation and parent-of-origin effects in reciprocal hybrid endosperm of castor bean.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6987

By:

Xu, Wei;
Dai, Mengyuan;
Li, Fei;
Liu, Aizhong

Publication type:

Article

Nascent RNA transcripts facilitate the formation of G-quadruplexes.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7236, doi. 10.1093/nar/gku416

By:

Shrestha, Prakash;
Xiao, Shan;
Dhakal, Soma;
Tan, Zheng;
Mao, Hanbin

Publication type:

Article

The CDK regulators Cdh1 and Sic1 promote efficient usage of DNA replication origins to prevent chromosomal instability at a chromosome arm.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7057, doi. 10.1093/nar/gku313

By:

Ayuda-Durán, Pilar;
Devesa, Fernando;
Gomes, Fábia;
Sequeira-Mendes, Joana;
Ávila-Zarza, Carmelo;
Gómez, María;
Calzada, Arturo

Publication type:

Article

Direct analysis of Holliday junction resolving enzyme in a DNA origami nanostructure.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7421, doi. 10.1093/nar/gku320

By:

Suzuki, Yuki;
Endo, Masayuki;
Cañas, Cristina;
Ayora, Silvia;
Alonso, Juan C.;
Sugiyama, Hiroshi;
Takeyasu, Kunio

Publication type:

Article

Disease-associated CAG·CTG triplet repeats expand rapidly in non-dividing mouse cells, but cell cycle arrest is insufficient to drive expansion.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7047, doi. 10.1093/nar/gku285

By:

Gomes-Pereira, Mário;
Hilley, James D.;
Morales, Fernando;
Adam, Berit;
James, Helen E.;
Monckton, Darren G.

Publication type:

Article

Development of synthetic selfish elements based on modular nucleases in Drosophila melanogaster.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7461, doi. 10.1093/nar/gku387

By:

Simoni, Alekos;
Siniscalchi, Carla;
Chan, Yuk-Sang;
Huen, David S.;
Russell, Steven;
Windbichler, Nikolai;
Crisanti, Andrea

Publication type:

Article

Staufen1-mediated mRNA decay induces Requiem mRNA decay through binding of Staufen1 to the Requiem 3′UTR.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6999, doi. 10.1093/nar/gku388

By:

Kim, Min Young;
Park, Jungyun;
Lee, Jong Joo;
Ha, Dae Hyun;
Kim, Jonghwan;
Kim, Chan Gil;
Hwang, Jungwook;
Kim, Chul Geun

Publication type:

Article

The evolutionary dynamics of variant antigen genes in Babesia reveal a history of genomic innovation underlying host–parasite interaction.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7113, doi. 10.1093/nar/gku322

By:

Jackson, Andrew P.;
Otto, Thomas D.;
Darby, Alistair;
Ramaprasad, Abhinay;
Xia, Dong;
Echaide, Ignacio Eduardo;
Farber, Marisa;
Gahlot, Sunayna;
Gamble, John;
Gupta, Dinesh;
Gupta, Yask;
Jackson, Louise;
Malandrin, Laurence;
Malas, Tareq B.;
Moussa, Ehab;
Nair, Mridul;
Reid, Adam J.;
Sanders, Mandy;
Sharma, Jyotsna;
Tracey, Alan

Publication type:

Article

TEMP: a computational method for analyzing transposable element polymorphism in populations.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6826, doi. 10.1093/nar/gku323

By:

Zhuang, Jiali;
Wang, Jie;
Theurkauf, William;
Weng, Zhiping

Publication type:

Article

Mechanical properties of symmetric and asymmetric DNA A-tracts: implications for looping and nucleosome positioning.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7383

By:

Dršata, Tomáš;
Špačková, Naďa;
Jurečka, Petr;
Zgarbová, Marie;
Šponer, Jiří;
Lankaš, Filip

Publication type:

Article

Nucleic Acids Research: Editorial Board.

Published in:: Nucleic Acids Research, 2014, v. 42, n. 11, p. ii, doi. 10.1093/nar/gku025
Publication type:: Article

Hydrolytic function of Exo1 in mammalian mismatch repair.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7104, doi. 10.1093/nar/gku420

By:

Shao, Hongbing;
Baitinger, Celia;
Soderblom, Erik J.;
Burdett, Vickers;
Modrich, Paul

Publication type:

Article

Synthesis of structurally diverse major groove DNA interstrand crosslinks using three different aldehyde precursors.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7429, doi. 10.1093/nar/gku328

By:

Mukherjee, Shivam;
Guainazzi, Angelo;
Schärer, Orlando D.

Publication type:

Article

A short RNA stem–loop is necessary and sufficient for repression of gene expression during early logarithmic phase in trypanosomes.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7201, doi. 10.1093/nar/gku358

By:

Fernández-Moya, Sandra M.;
Carrington, Mark;
Estévez, Antonio M.

Publication type:

Article

A complete landscape of post-transcriptional modifications in mammalian mitochondrial tRNAs.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7346, doi. 10.1093/nar/gku390

By:

Suzuki, Takeo;
Suzuki, Tsutomu

Publication type:

Article

The telomerase inhibitor Gno1p/PINX1 activates the helicase Prp43p during ribosome biogenesis.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 7330, doi. 10.1093/nar/gku357

By:

Chen, Yan-Ling;
Capeyrou, Régine;
Humbert, Odile;
Mouffok, Saïda;
Kadri, Yasmine Al;
Lebaron, Simon;
Henras, Anthony K.;
Henry, Yves

Publication type:

Article

Nucleosome regulatory dynamics in response to TGFβ.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6921, doi. 10.1093/nar/gku326

By:

Enroth, Stefan;
Andersson, Robin;
Bysani, Madhusudhan;
Wallerman, Ola;
Termén, Stefan;
Tuch, Brian B.;
De La Vega, Francisco M.;
Heldin, Carl-Henrik;
Moustakas, Aristidis;
Komorowski, Jan;
Wadelius, Claes

Publication type:

Article

Unraveling the regulatory connections between two controllers of breast cancer cell fate.

Published in:

Nucleic Acids Research, 2014, v. 42, n. 11, p. 6839, doi. 10.1093/nar/gku360

By:

Lee, Jinho;
Tiwari, Abhinav;
Shum, Victor;
Mills, Gordon B.;
Mancini, Michael A.;
Igoshin, Oleg A.;
Balázsi, Gábor

Publication type:

Article