Works matching IS 03051048 AND DT 2013 AND VI 41 AND IP 13

Results: 45

The effect of LacI autoregulation on the performance of the lactose utilization system in Escherichia coli.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6381, doi. 10.1093/nar/gkt351

By:

Semsey, Szabolcs;
Jauffred, Liselotte;
Csiszovszki, Zsolt;
Erdőssy, János;
Stéger, Viktor;
Hansen, Sabine;
Krishna, Sandeep

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 13, p. iii, doi. 10.1093/nar/gks1418
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 13, p. i, doi. 10.1093/nar/gks1366
Publication type:: Article

Mechanisms of in vivo binding site selection of the hematopoietic master transcription factor PU.1.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6391, doi. 10.1093/nar/gkt355

By:

Pham, Thu-Hang;
Minderjahn, Julia;
Schmidl, Christian;
Hoffmeister, Helen;
Schmidhofer, Sandra;
Chen, Wei;
Längst, Gernot;
Benner, Christopher;
Rehli, Michael

Publication type:

Article

The proto-oncoprotein FBI-1 interacts with MBD3 to recruit the Mi-2/NuRD-HDAC complex and BCoR and to silence p21WAF/CDKN1A by DNA methylation.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6403, doi. 10.1093/nar/gkt359

By:

Choi, Won-Il;
Jeon, Bu-Nam;
Yoon, Jae-Hyeon;
Koh, Dong-In;
Kim, Myung-Hwa;
Yu, Mi-Young;
Lee, Kyung-Mi;
Kim, Youngsoo;
Kim, Kyunggon;
Hur, Sujin Susanne;
Lee, Choong-Eun;
Kim, Kyung-Sup;
Hur, Man-Wook

Publication type:

Article

Red5 and three nuclear pore components are essential for efficient suppression of specific mRNAs during vegetative growth of fission yeast.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6674, doi. 10.1093/nar/gkt363

By:

Sugiyama, Tomoyasu;
Wanatabe, Nobuyoshi;
Kitahata, Eri;
Tani, Tokio;
Sugioka-Sugiyama, Rie

Publication type:

Article

The telomere lengthening conundrum—artifact or biology?

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e131, doi. 10.1093/nar/gkt370

By:

Steenstrup, Troels;
Hjelmborg, Jacob v. B.;
Kark, Jeremy D.;
Christensen, Kaare;
Aviv, Abraham

Publication type:

Article

The pentatricopeptide repeat MTSF1 protein stabilizes the nad4 mRNA in Arabidopsis mitochondria.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6650, doi. 10.1093/nar/gkt337

By:

Haïli, Nawel;
Arnal, Nadège;
Quadrado, Martine;
Amiar, Souad;
Tcherkez, Guillaume;
Dahan, Jennifer;
Briozzo, Pierre;
Colas des Francs-Small, Catherine;
Vrielynck, Nathalie;
Mireau, Hakim

Publication type:

Article

Real-time solution measurement of RAD51- and RecA-mediated strand assimilation without background annealing.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e130, doi. 10.1093/nar/gkt362

By:

Budke, Brian;
Chan, Yuen-Ling;
Bishop, Douglas K.;
Connell, Philip P.

Publication type:

Article

4-vinyl-substituted pyrimidine nucleosides exhibit the efficient and selective formation of interstrand cross-links with RNA and duplex DNA.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6774, doi. 10.1093/nar/gkt197

By:

Nishimoto, Atsushi;
Jitsuzaki, Daichi;
Onizuka, Kazumitsu;
Taniguchi, Yosuke;
Nagatsugi, Fumi;
Sasaki, Shigeki

Publication type:

Article

PyroHMMsnp: an SNP caller for Ion Torrent and 454 sequencing data.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e136, doi. 10.1093/nar/gkt372

By:

Zeng, Feng;
Jiang, Rui;
Chen, Ting

Publication type:

Article

Polycomb recruitment attenuates retinoic acid–induced transcription of the bivalent NR2F1 gene.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6430, doi. 10.1093/nar/gkt367

By:

Laursen, Kristian B.;
Mongan, Nigel P.;
Zhuang, Yong;
Ng, Mary M.;
Benoit, Yannick D.;
Gudas, Lorraine J.

Publication type:

Article

Life without tRNAArg–adenosine deaminase TadA: evolutionary consequences of decoding the four CGN codons as arginine in Mycoplasmas and other Mollicutes.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6531, doi. 10.1093/nar/gkt356

By:

Yokobori, Shin-ichi;
Kitamura, Aya;
Grosjean, Henri;
Bessho, Yoshitaka

Publication type:

Article

Activation of a human chromosomal replication origin by protein tethering.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6460, doi. 10.1093/nar/gkt368

By:

Chen, Xiaomi;
Liu, Guoqi;
Leffak, Michael

Publication type:

Article

Cell type specificity and structural determinants of IRES activity from the 5′ leaders of different HIV-1 transcripts.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6698, doi. 10.1093/nar/gkt358

By:

Plank, Terra-Dawn M.;
Whitehurst, James T.;
Kieft, Jeffrey S.

Publication type:

Article

Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e129, doi. 10.1093/nar/gkt371

By:

Hahn, Christoph;
Bachmann, Lutz;
Chevreux, Bastien

Publication type:

Article

Differential roles of human Dicer-binding proteins TRBP and PACT in small RNA processing.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6568, doi. 10.1093/nar/gkt361

By:

Lee, Ho Young;
Zhou, Kaihong;
Smith, Alison Marie;
Noland, Cameron L.;
Doudna, Jennifer A.

Publication type:

Article

Regulation of the androgen receptor by SET9-mediated methylation.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6783, doi. 10.1093/nar/gkt422

By:

Gaughan, Luke;
Stockley, Jacqueline;
Wang, Nan;
McCracken, Stuart R. C.;
Treumann, Achim;
Armstrong, Kelly;
Shaheen, Fadhel;
Watt, Kate;
McEwan, Iain J.;
Wang, Chenguang;
Pestell, Richard G.;
Robson, Craig N.

Publication type:

Article

In vivo single-molecule kinetics of activation and subsequent activity of the arabinose promoter.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6544

By:

Mäkelä, Jarno;
Kandhavelu, Meenakshisundaram;
Oliveira, Samuel M. D.;
Chandraseelan, Jerome G.;
Lloyd-Price, Jason;
Peltonen, Juha;
Yli-Harja, Olli;
Ribeiro, Andre S.

Publication type:

Article

Quantitative assessment of Tet-induced oxidation products of 5-methylcytosine in cellular and tissue DNA.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6421, doi. 10.1093/nar/gkt360

By:

Liu, Shuo;
Wang, Jin;
Su, Yijing;
Guerrero, Candace;
Zeng, Yaxue;
Mitra, Devarati;
Brooks, Philip J.;
Fisher, David E.;
Song, Hongjun;
Wang, Yinsheng

Publication type:

Article

Tel1 and Rad51 are involved in the maintenance of telomeres with capping deficiency.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6490, doi. 10.1093/nar/gkt365

By:

Di Domenico, Enea Gino;
Mattarocci, Stefano;
Cimino-Reale, Graziella;
Parisi, Paola;
Cifani, Noemi;
D’Ambrosio, Ettore;
Zakian, Virginia A.;
Ascenzioni, Fiorentina

Publication type:

Article

The mTERF protein MOC1 terminates mitochondrial DNA transcription in the unicellular green alga Chlamydomonas reinhardtii.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6553, doi. 10.1093/nar/gkt313

By:

Wobbe, Lutz;
Nixon, Peter J.

Publication type:

Article

Tertiary structure of bacterial selenocysteine tRNA.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6729, doi. 10.1093/nar/gkt321

By:

Itoh, Yuzuru;
Sekine, Shun-ichi;
Suetsugu, Shiro;
Yokoyama, Shigeyuki

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2013, v. 41, n. 13, p. ii, doi. 10.1093/nar/gks1394
Publication type:: Article

The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6739, doi. 10.1093/nar/gkt354

By:

Wienk, Hans;
Slootweg, Jack C.;
Speerstra, Sietske;
Kaptein, Robert;
Boelens, Rolf;
Folkers, Gert E.

Publication type:

Article

The HIV-2 Rev-response element: determining secondary structure and defining folding intermediates.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6637, doi. 10.1093/nar/gkt353

By:

Lusvarghi, Sabrina;
Sztuba-Solinska, Joanna;
Purzycka, Katarzyna J.;
Pauly, Gary T.;
Rausch, Jason W.;
Grice, Stuart F. J. Le

Publication type:

Article

A concept of eliminating nonhomologous recombination for scalable and safe AAV vector generation for human gene therapy.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6609, doi. 10.1093/nar/gkt404

By:

Dong, Biao;
Moore, Andrea R.;
Dai, Jihong;
Roberts, Sean;
Chu, Kirk;
Kapranov, Philipp;
Moss, Bernard;
Xiao, Weidong

Publication type:

Article

Quantitative and simultaneous translational control of distinct mammalian mRNAs.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e135, doi. 10.1093/nar/gkt347

By:

Endo, Kei;
Stapleton, James A.;
Hayashi, Karin;
Saito, Hirohide;
Inoue, Tan

Publication type:

Article

Real-time detection of DNA topological changes with a fluorescently labeled cruciform.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e133, doi. 10.1093/nar/gkt413

By:

Jude, Kevin M.;
Hartland, Abbey;
Berger, James M.

Publication type:

Article

Control of DNA minor groove width and Fis protein binding by the purine 2-amino group.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6750, doi. 10.1093/nar/gkt357

By:

Hancock, Stephen P.;
Ghane, Tahereh;
Cascio, Duilio;
Rohs, Remo;
Di Felice, Rosa;
Johnson, Reid C.

Publication type:

Article

The Impact of Trans-Regulation on the Evolutionary Rates of Metazoan Proteins.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6371, doi. 10.1093/nar/gkt349

By:

Chen, Yi-Ching;
Cheng, Jen-Hao;
Tsai, Zing Tsung-Yeh;
Tsai, Huai-Kuang;
Chuang, Trees-Juen

Publication type:

Article

Synthetic mammalian trigger-controlled bipartite transcription factors.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e134, doi. 10.1093/nar/gkt405

By:

Folcher, Marc;
Xie, Mingqi;
Spinnler, Andrea;
Fussenegger, Martin

Publication type:

Article

Recognition of RNA duplexes by chemically modified triplex-forming oligonucleotides.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6664, doi. 10.1093/nar/gkt352

By:

Zhou, Yuan;
Kierzek, Elzbieta;
Loo, Zi Ping;
Antonio, Meraldo;
Yau, Yin Hoe;
Chuah, York Wieo;
Geifman-Shochat, Susana;
Kierzek, Ryszard;
Chen, Gang

Publication type:

Article

The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6577, doi. 10.1093/nar/gkt369

By:

Gupta, Sachin Kumar;
Kosti, Idit;
Plaut, Guy;
Pivko, Asher;
Tkacz, Itai Dov;
Cohen-Chalamish, Smadar;
Biswas, Dipul Kumar;
Wachtel, Chaim;
Waldman Ben-Asher, Hiba;
Carmi, Shai;
Glaser, Fabian;
Mandel-Gutfreund, Yael;
Michaeli, Shulamit

Publication type:

Article

Human mitochondrial disease-like symptoms caused by a reduced tRNA aminoacylation activity in flies.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6595, doi. 10.1093/nar/gkt402

By:

Guitart, Tanit;
Picchioni, Daria;
Piñeyro, David;
Ribas de Pouplana, Lluís

Publication type:

Article

Crystal structure and functional insights into uracil-DNA glycosylase inhibition by phage φ29 DNA mimic protein p56.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6761, doi. 10.1093/nar/gkt395

By:

Baños-Sanz, José Ignacio;
Mojardín, Laura;
Sanz-Aparicio, Julia;
Lázaro, José M.;
Villar, Laurentino;
Serrano-Heras, Gemma;
González, Beatriz;
Salas, Margarita

Publication type:

Article

Single-molecule study of the CUG repeat–MBNL1 interaction and its inhibition by small molecules.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6687, doi. 10.1093/nar/gkt330

By:

Haghighat Jahromi, Amin;
Honda, Masayoshi;
Zimmerman, Steven C.;
Spies, Maria

Publication type:

Article

FANCD2 regulates BLM complex functions independently of FANCI to promote replication fork recovery.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6444, doi. 10.1093/nar/gkt348

By:

Chaudhury, Indrajit;
Sareen, Archana;
Raghunandan, Maya;
Sobeck, Alexandra

Publication type:

Article

The helicase FBH1 is tightly regulated by PCNA via CRL4(Cdt2)-mediated proteolysis in human cells.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6501, doi. 10.1093/nar/gkt397

By:

Bacquin, Agathe;
Pouvelle, Caroline;
Siaud, Nicolas;
Perderiset, Mylène;
Salomé-Desnoulez, Sophie;
Tellier-Lebegue, Carine;
Lopez, Bernard;
Charbonnier, Jean-Baptiste;
Kannouche, Patricia L.

Publication type:

Article

Plant nonsense-mediated mRNA decay is controlled by different autoregulatory circuits and can be induced by an EJC-like complex.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6715

By:

Nyikó, Tünde;
Kerényi, Farkas;
Szabadkai, Levente;
Benkovics, Anna H.;
Major, Péter;
Sonkoly, Boglárka;
Mérai, Zsuzsanna;
Barta, Endre;
Niemiec, Emilia;
Kufel, Joanna;
Silhavy, Dániel

Publication type:

Article

IGF2BP1 promotes mesenchymal cell properties and migration of tumor-derived cells by enhancing the expression of LEF1 and SNAI2 (SLUG).

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6618, doi. 10.1093/nar/gkt410

By:

Zirkel, Anne;
Lederer, Marcell;
Stöhr, Nadine;
Pazaitis, Nikolaos;
Hüttelmaier, Stefan

Publication type:

Article

The structural basis of actinomycin D–binding induces nucleotide flipping out, a sharp bend and a left-handed twist in CGG triplet repeats.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6782

By:

Lo, Yu-Sheng;
Tseng, Wen-Hsuan;
Chuang, Chien-Ying;
Hou, Ming-Hon

Publication type:

Article

r3Cseq: an R/Bioconductor package for the discovery of long-range genomic interactions from chromosome conformation capture and next-generation sequencing data.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. e132, doi. 10.1093/nar/gkt373

By:

Thongjuea, Supat;
Stadhouders, Ralph;
Grosveld, Frank G.;
Soler, Eric;
Lenhard, Boris

Publication type:

Article

Caffeine suppresses homologous recombination through interference with RAD51-mediated joint molecule formation.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6475, doi. 10.1093/nar/gkt375

By:

Zelensky, Alex N.;
Sanchez, Humberto;
Ristic, Dejan;
Vidic, Iztok;
van Rossum-Fikkert, Sari E.;
Essers, Jeroen;
Wyman, Claire;
Kanaar, Roland

Publication type:

Article

Identification of the nature of reading frame transitions observed in prokaryotic genomes.

Published in:

Nucleic Acids Research, 2013, v. 41, n. 13, p. 6514, doi. 10.1093/nar/gkt274

By:

Antonov, Ivan;
Coakley, Arthur;
Atkins, John F.;
Baranov, Pavel V.;
Borodovsky, Mark

Publication type:

Article