Works matching IS 03051048 AND DT 2012 AND VI 40 AND IP 21

Results: 55

Novel insights from hybrid LacI/GalR proteins: family-wide functional attributes and biologically significant variation in transcription repression.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11139, doi. 10.1093/nar/gks806

By:

Meinhardt, Sarah;
Manley, Michael W.;
Becker, Nicole A.;
Hessman, Jacob A.;
Maher, L. James;
Swint-Kruse, Liskin

Publication type:

Article

Chimeric TALE recombinases with programmable DNA sequence specificity.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11163, doi. 10.1093/nar/gks875

By:

Mercer, Andrew C.;
Gaj, Thomas;
Fuller, Roberta P.;
Barbas, Carlos F.

Publication type:

Article

The Ighmbp2 helicase structure reveals the molecular basis for disease-causing mutations in DMSA1.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11009, doi. 10.1093/nar/gks792

By:

Lim, Siew Choo;
Bowler, Matthew W.;
Lai, Ting Feng;
Song, Haiwei

Publication type:

Article

Exploring polymorphisms in B-DNA helical conformations.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10668, doi. 10.1093/nar/gks884

By:

Dans, Pablo D.;
Pérez, Alberto;
Faustino, Ignacio;
Lavery, Richard;
Orozco, Modesto

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 21, p. iii, doi. 10.1093/nar/gks127
Publication type:: Article

RecOR complex including RecR N-N dimer and RecO monomer displays a high affinity for ssDNA.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11115, doi. 10.1093/nar/gks889

By:

Tang, Qun;
Gao, Pu;
Liu, Yan-Ping;
Gao, Ang;
An, Xiao-Min;
Liu, Shun;
Yan, Xiao-Xue;
Liang, Dong-Cai

Publication type:

Article

The dynamics of Ku70/80 and DNA-PKcs at DSBs induced by ionizing radiation is dependent on the complexity of damage.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10821, doi. 10.1093/nar/gks879

By:

Reynolds, Pamela;
Anderson, Jennifer A.;
Harper, Jane V.;
Hill, Mark A.;
Botchway, Stanley W.;
Parker, Anthony W.;
O’Neill, Peter

Publication type:

Article

Manipulation of gene expression in zebrafish using caged circular morpholino oligomers.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11155, doi. 10.1093/nar/gks840

By:

Wang, Yuan;
Wu, Li;
Wang, Peng;
Lv, Cong;
Yang, Zhenjun;
Tang, Xinjing

Publication type:

Article

Distinct roles for DNA-PK, ATM and ATR in RPA phosphorylation and checkpoint activation in response to replication stress.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10780, doi. 10.1093/nar/gks849

By:

Liu, Shengqin;
Opiyo, Stephen O.;
Manthey, Karoline;
Glanzer, Jason G.;
Ashley, Amanda K.;
Amerin, Courtney;
Troksa, Kyle;
Shrivastav, Meena;
Nickoloff, Jac A.;
Oakley, Greg G.

Publication type:

Article

Binding of two DNA molecules by type II topoisomerases for decatenation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10904, doi. 10.1093/nar/gks843

By:

Kumar, Rupesh;
Riley, Jane E.;
Parry, Damian;
Bates, Andrew D.;
Nagaraja, Valakunja

Publication type:

Article

Functional impact bias reveals cancer drivers.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e169, doi. 10.1093/nar/gks743

By:

Gonzalez-Perez, Abel;
Lopez-Bigas, Nuria

Publication type:

Article

Histone H2A variants in nucleosomes and chromatin: more or less stable?

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10719, doi. 10.1093/nar/gks865

By:

Bönisch, Clemens;
Hake, Sandra B.

Publication type:

Article

Genome-wide activation of latent donor splice sites in stress and disease.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10980, doi. 10.1093/nar/gks834

By:

Nevo, Yuval;
Kamhi, Eyal;
Jacob-Hirsch, Jasmine;
Amariglio, Ninette;
Rechavi, Gideon;
Sperling, Joseph;
Sperling, Ruth

Publication type:

Article

Strand directionality affects cation binding and movement within tetramolecular G-quadruplexes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11047

By:

Šket, Primož;
Virgilio, Antonella;
Esposito, Veronica;
Galeone, Aldo;
Plavec, Janez

Publication type:

Article

Fluorescent signatures for variable DNA sequences.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e164, doi. 10.1093/nar/gks731

By:

Rice, John E.;
Reis, Arthur H.;
Rice, Lisa M.;
Carver-Brown, Rachel K.;
Wangh, Lawrence J.

Publication type:

Article

Reconstructing dynamic gene regulatory networks from sample-based transcriptional data.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10657, doi. 10.1093/nar/gks860

By:

Zhu, Hailong;
Rao, R. Shyama Prasad;
Zeng, Tao;
Chen, Luonan

Publication type:

Article

Alkbh1 and Tzfp repress a non-repeat piRNA cluster in pachytene spermatocytes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10950, doi. 10.1093/nar/gks839

By:

Nordstrand, Line M.;
Furu, Kari;
Paulsen, Jonas;
Rognes, Torbjørn;
Klungland, Arne

Publication type:

Article

Base-pairing preferences, physicochemical properties and mutational behaviour of the DNA lesion 8-nitroguanine†.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11126, doi. 10.1093/nar/gks799

By:

Bhamra, Inder;
Compagnone-Post, Patricia;
O’Neil, Ian A.;
Iwanejko, Lesley A.;
Bates, Andrew D.;
Cosstick, Richard

Publication type:

Article

The DUBm subunit Sgf11 is required for mRNA export and interacts with Cbp80 in Drosophila.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10689, doi. 10.1093/nar/gks857

By:

Gurskiy, Dmitriy;
Orlova, Anastasija;
Vorobyeva, Nadezhda;
Nabirochkina, Elena;
Krasnov, Alexey;
Shidlovskii, Yulii;
Georgieva, Sofia;
Kopytova, Daria

Publication type:

Article

Chromatin signature discovery via histone modification profile alignments.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10642, doi. 10.1093/nar/gks848

By:

Wang, Jianrong;
Lunyak, Victoria V.;
Jordan, I. King

Publication type:

Article

Rbg1–Tma46 dimer structure reveals new functional domains and their role in polysome recruitment.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11100, doi. 10.1093/nar/gks867

By:

Francis, Sandrea M.;
Gas, María-Eugenia;
Daugeron, Marie-Claire;
Bravo, Jeronimo;
Séraphin, Bertrand

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 21, p. i, doi. 10.1093/nar/gks105
Publication type:: Article

A dual switch controls bacterial enhancer-dependent transcription.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10878, doi. 10.1093/nar/gks844

By:

Wiesler, Simone C.;
Burrows, Patricia C.;
Buck, Martin

Publication type:

Article

Characterization of human Spartan/C1orf124, an ubiquitin-PCNA interacting regulator of DNA damage tolerance.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10795, doi. 10.1093/nar/gks850

By:

Juhasz, Szilvia;
Balogh, David;
Hajdu, Ildiko;
Burkovics, Peter;
Villamil, Mark A.;
Zhuang, Zhihao;
Haracska, Lajos

Publication type:

Article

Epigenetic Editing: targeted rewriting of epigenetic marks to modulate expression of selected target genes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10596, doi. 10.1093/nar/gks863

By:

de Groote, Marloes L.;
Verschure, Pernette J.;
Rots, Marianne G.

Publication type:

Article

Evolutionarily divergent spliceosomal snRNAs and a conserved non-coding RNA processing motif in Giardia lamblia.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10995, doi. 10.1093/nar/gks887

By:

Hudson, Andrew J.;
Moore, Ashley N.;
Elniski, David;
Joseph, Joella;
Yee, Janet;
Russell, Anthony G.

Publication type:

Article

Target mRNA inhibition by oligonucleotide drugs in man.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10585, doi. 10.1093/nar/gks861

By:

Lightfoot, Helen L.;
Hall, Jonathan

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 21, p. ii, doi. 10.1093/nar/gks083
Publication type:: Article

Small RNA deep sequencing reveals a distinct miRNA signature released in exosomes from prion-infected neuronal cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10937, doi. 10.1093/nar/gks832

By:

Bellingham, Shayne A.;
Coleman, Bradley M.;
Hill, Andrew F.

Publication type:

Article

An archaeal sRNA targeting cis- and trans-encoded mRNAs via two distinct domains.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10964, doi. 10.1093/nar/gks847

By:

Jäger, Dominik;
Pernitzsch, Sandy R.;
Richter, Andreas S.;
Backofen, Rolf;
Sharma, Cynthia M.;
Schmitz, Ruth A.

Publication type:

Article

Conformational transitions regulate the exposure of a DNA-binding domain in the RuvBL1–RuvBL2 complex.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11086, doi. 10.1093/nar/gks871

By:

López-Perrote, Andrés;
Muñoz-Hernández, Hugo;
Gil, David;
Llorca, Oscar

Publication type:

Article

Common chaperone activity in the G-domain of trGTPase protects L11–L12 interaction on the ribosome.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10851, doi. 10.1093/nar/gks833

By:

Zhang, Dandan;
Liu, Guangqiao;
Xue, Jiaying;
Lou, Jizhong;
Nierhaus, Knud H.;
Gong, Weimin;
Qin, Yan

Publication type:

Article

Circular retrotransposition products generated by a LINE retrotransposon.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10866, doi. 10.1093/nar/gks859

By:

Han, Jeffrey S.;
Shao, Shirley

Publication type:

Article

Structural mechanism of Staphylococcus aureus Hfq binding to an RNA A-tract.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11023, doi. 10.1093/nar/gks809

By:

Horstmann, Nicola;
Orans, Jillian;
Valentin-Hansen, Poul;
Shelburne, Samuel A.;
Brennan, Richard G.

Publication type:

Article

Analysis of the epigenetic status of telomeres by using ChIP-seq data.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e163, doi. 10.1093/nar/gks730

By:

Vaquero-Sedas, María I.;
Luo, Chongyuan;
Vega-Palas, Miguel A.

Publication type:

Article

Inducible and reversible regulation of endogenous gene in mouse.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e166, doi. 10.1093/nar/gks738

By:

Sun, Ruilin;
Zhao, Kai;
Shen, Ruling;
Cai, Lei;
Yang, Xingyu;
Kuang, Ying;
Mao, Jifang;
Huang, Fang;
Wang, Zhugang;
Fei, Jian

Publication type:

Article

Synthetic riboswitches for external regulation of genes transferred by replication-deficient and oncolytic adenoviruses.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e167, doi. 10.1093/nar/gks734

By:

Ketzer, Patrick;
Haas, Simon F.;
Engelhardt, Sarah;
Hartig, Jörg S.;
Nettelbeck, Dirk M.

Publication type:

Article

SLiMPrints: conservation-based discovery of functional motif fingerprints in intrinsically disordered protein regions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10628, doi. 10.1093/nar/gks854

By:

Davey, Norman E.;
Cowan, Joanne L.;
Shields, Denis C.;
Gibson, Toby J.;
Coldwell, Mark J.;
Edwards, Richard J.

Publication type:

Article

Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10753, doi. 10.1093/nar/gks870

By:

Cui, Feng;
Cole, Hope A.;
Clark, David J.;
Zhurkin, Victor B.

Publication type:

Article

LINE1 family member is negative regulator of HLA-G expression.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10742, doi. 10.1093/nar/gks874

By:

Ikeno, Masashi;
Suzuki, Nobutaka;
Kamiya, Megumi;
Takahashi, Yuji;
Kudoh, Jun;
Okazaki, Tsuneko

Publication type:

Article

Unbiased proteomic analysis of proteins interacting with the HIV-1 5′LTR sequence: role of the transcription factor Meis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e168, doi. 10.1093/nar/gks733

By:

Tacheny, A.;
Michel, S.;
Dieu, M.;
Payen, L.;
Arnould, T.;
Renard, P.

Publication type:

Article

Estrogen-induced upregulation and 3′-UTR shortening of CDC6.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10679, doi. 10.1093/nar/gks855

By:

Akman, Begum H.;
Can, Tolga;
Erson-Bensan, A. Elif

Publication type:

Article

Context-specific microRNA analysis: identification of functional microRNAs and their mRNA targets.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10614, doi. 10.1093/nar/gks841

By:

Bossel Ben-Moshe, Noa;
Avraham, Roi;
Kedmi, Merav;
Zeisel, Amit;
Yitzhaky, Assif;
Yarden, Yosef;
Domany, Eytan

Publication type:

Article

The roles of WRN and BLM RecQ helicases in the Alternative Lengthening of Telomeres.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10809, doi. 10.1093/nar/gks862

By:

Mendez-Bermudez, Aaron;
Hidalgo-Bravo, Alberto;
Cotton, Victoria E.;
Gravani, Athanasia;
Jeyapalan, Jennie N.;
Royle, Nicola J.

Publication type:

Article

Massive gene acquisitions in Mycobacterium indicus pranii provide a perspective on mycobacterial evolution.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10832, doi. 10.1093/nar/gks793

By:

Saini, Vikram;
Raghuvanshi, Saurabh;
Khurana, Jitendra P.;
Ahmed, Niyaz;
Hasnain, Seyed E.;
Tyagi, Akhilesh K.;
Tyagi, Anil K.

Publication type:

Article

Structural insight of a concentration-dependent mechanism by which YdiV inhibits Escherichia coli flagellum biogenesis and motility.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 11073, doi. 10.1093/nar/gks869

By:

Li, Bingqing;
Li, Ning;
Wang, Feng;
Guo, Liming;
Huang, Yan;
Liu, Xiuhua;
Wei, Tiandi;
Zhu, Deyu;
Liu, Cuilan;
Pan, Hongfang;
Xu, Sujuan;
Wang, Hong-Wei;
Gu, Lichuan

Publication type:

Article

Persistent androgen receptor-mediated transcription in castration-resistant prostate cancer under androgen-deprived conditions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10765, doi. 10.1093/nar/gks888

By:

Decker, Keith F.;
Zheng, Dali;
He, Yuhong;
Bowman, Tamara;
Edwards, John R.;
Jia, Li

Publication type:

Article

Fluorescent intercalator displacement replacement (FIDR) assay: determination of relative thermodynamic and kinetic parameters in triplex formation—a case study using triplex-forming LNAs.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. e162, doi. 10.1093/nar/gks729

By:

Sau, Sujay P.;
Kumar, Pawan;
Sharma, Pawan K.;
Hrdlicka, Patrick J.

Publication type:

Article

Removal of a frameshift between the hsdM and hsdS genes of the EcoKI Type IA DNA restriction and modification system produces a new type of system and links the different families of Type I systems.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10916, doi. 10.1093/nar/gks876

By:

Roberts, Gareth A.;
Chen, Kai;
Cooper, Laurie P.;
White, John H.;
Blakely, Garry W.;
Dryden, David T. F.

Publication type:

Article

Kinetic and thermodynamic characterization of the reaction pathway of box H/ACA RNA-guided pseudouridine formation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 21, p. 10925, doi. 10.1093/nar/gks882

By:

Yang, Xinxing;
Duan, Jingqi;
Li, Shuang;
Wang, Peng;
Ma, Shoucai;
Ye, Keqiong;
Zhao, Xin Sheng

Publication type:

Article