Works matching IS 03051048 AND DT 2012 AND VI 40 AND IP 19

Results: 61

Structure of the RNA claw of the DNA packaging motor of bacteriophage φ29.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9953, doi. 10.1093/nar/gks724

By:

Harjes, Elena;
Kitamura, Aya;
Zhao, Wei;
Morais, Marc C.;
Jardine, Paul J.;
Grimes, Shelley;
Matsuo, Hiroshi

Publication type:

Article

Towards the classification of DYT6 dystonia mutants in the DNA-binding domain of THAP1.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9927, doi. 10.1093/nar/gks703

By:

Campagne, Sébastien;
Muller, Isabelle;
Milon, Alain;
Gervais, Virginie

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 19, p. ii, doi. 10.1093/nar/gks081
Publication type:: Article

Cell type–specific genomics of Drosophila neurons.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9691, doi. 10.1093/nar/gks671

By:

Henry, Gilbert L.;
Davis, Fred P.;
Picard, Serge;
Eddy, Sean R.

Publication type:

Article

Winding single-molecule double-stranded DNA on a nanometer-sized reel.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e151, doi. 10.1093/nar/gks651

By:

You, Huijuan;
Iino, Ryota;
Watanabe, Rikiya;
Noji, Hiroyuki

Publication type:

Article

p32/gC1qR is indispensable for fetal development and mitochondrial translation: importance of its RNA-binding ability.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9717, doi. 10.1093/nar/gks774

By:

Yagi, Mikako;
Uchiumi, Takeshi;
Takazaki, Shinya;
Okuno, Bungo;
Nomura, Masatoshi;
Yoshida, Shin-ichi;
Kanki, Tomotake;
Kang, Dongchon

Publication type:

Article

A distant cis acting intronic element induces site-selective RNA editing.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9876, doi. 10.1093/nar/gks691

By:

Daniel, Chammiran;
Venø, Morten T.;
Ekdahl, Ylva;
Kjems, Jørgen;
Öhman, Marie

Publication type:

Article

Deoxycytidine kinase regulates the G2/M checkpoint through interaction with cyclin-dependent kinase 1 in response to DNA damage.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9621, doi. 10.1093/nar/gks707

By:

Yang, Chunying;
Lee, Michael;
Hao, Jianwei;
Cui, Xiaoli;
Guo, Xiaojing;
Smal, Caroline;
Bontemps, Françoise;
Ma, Shumei;
Liu, Xiaodong;
Engler, David;
Parker, William B.;
Xu, Bo

Publication type:

Article

Translation termination efficiency modulates ATF4 response by regulating ATF4 mRNA translation at 5′ short ORFs.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9557, doi. 10.1093/nar/gks762

By:

Ait Ghezala, Hayet;
Jolles, Béatrice;
Salhi, Samia;
Castrillo, Katia;
Carpentier, Wassila;
Cagnard, Nicolas;
Bruhat, Alain;
Fafournoux, Pierre;
Jean-Jean, Olivier

Publication type:

Article

Identification of differentially expressed non-coding RNAs in embryonic stem cell neural differentiation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9980, doi. 10.1093/nar/gks922

By:

Skreka, Konstantinia;
Schafferer, Simon;
Nat, Irina-Roxanna;
Zywicki, Marek;
Salti, Ahmad;
Apostolova, Galina;
Griehl, Matthias;
Rederstorff, Mathieu;
Dechant, Georg;
Hüttenhofer, Alexander

Publication type:

Article

Screening for catalytically active Type II restriction endonucleases using segregation-induced methylation deficiency.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e149, doi. 10.1093/nar/gks635

By:

Ukanis, Mindaugas;
Sapranauskas, Rimantas;
Lubys, Arvydas

Publication type:

Article

Histone dosage regulates DNA damage sensitivity in a checkpoint-independent manner by the homologous recombination pathway.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9604, doi. 10.1093/nar/gks722

By:

Liang, Dun;
Burkhart, Sarah Lyn;
Singh, Rakesh Kumar;
Kabbaj, Marie-Helene Miquel;
Gunjan, Akash

Publication type:

Article

3D chromatin conformation correlates with replication timing and is conserved in resting cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9470, doi. 10.1093/nar/gks736

By:

Moindrot, Benoit;
Audit, Benjamin;
Klous, Petra;
Baker, Antoine;
Thermes, Claude;
de Laat, Wouter;
Bouvet, Philippe;
Mongelard, Fabien;
Arneodo, Alain

Publication type:

Article

Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9917

By:

Moréra, Solange;
Grin, Inga;
Vigouroux, Armelle;
Couvé, Sophie;
Henriot, Véronique;
Saparbaev, Murat;
Ishchenko, Alexander A.

Publication type:

Article

Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9815, doi. 10.1093/nar/gks740

By:

Lunde, Bradley M.;
Magler, Iris;
Meinhart, Anton

Publication type:

Article

Nucleosomes affect local transformation efficiency.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9506, doi. 10.1093/nar/gks777

By:

Aslankoohi, Elham;
Voordeckers, Karin;
Sun, Hong;
Sanchez-Rodriguez, Aminael;
van der Zande, Elisa;
Marchal, Kathleen;
Verstrepen, Kevin J.

Publication type:

Article

GFam: a platform for automatic annotation of gene families.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e152, doi. 10.1093/nar/gks631

By:

Sasidharan, Rajkumar;
Nepusz, Tamás;
Swarbreck, David;
Huala, Eva;
Paccanaro, Alberto

Publication type:

Article

A novel Plasmodium falciparum SR protein is an alternative splicing factor required for the parasites’ proliferation in human erythrocytes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9903, doi. 10.1093/nar/gks735

By:

Eshar, Shiri;
Allemand, Eric;
Sebag, Ariel;
Glaser, Fabian;
Muchardt, Christian;
Mandel-Gutfreund, Yael;
Karni, Rotem;
Dzikowski, Ron

Publication type:

Article

The histone demethylase PHF8 is essential for cytoskeleton dynamics.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9429, doi. 10.1093/nar/gks716

By:

Asensio-Juan, Elena;
Gallego, Carme;
Martínez-Balbás, Marian A.

Publication type:

Article

Transferring isolated mitochondria into tissue culture cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e148, doi. 10.1093/nar/gks639

By:

Yang, Yi-Wei;
Koob, Michael D.

Publication type:

Article

Genome-wide identification of genes directly regulated by the pleiotropic transcription factor Spx in Bacillus subtilis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9571, doi. 10.1093/nar/gks755

By:

Rochat, Tatiana;
Nicolas, Pierre;
Delumeau, Olivier;
Rabatinová, Alžbeta;
Korelusová, Jana;
Leduc, Aurélie;
Bessières, Philippe;
Dervyn, Etienne;
Krásný, Libor;
Noirot, Philippe

Publication type:

Article

The role of Ca2+ in the activity of Mycobacterium tuberculosis DNA gyrase.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9774, doi. 10.1093/nar/gks704

By:

Karkare, Shantanu;
Yousafzai, Faridoon;
Mitchenall, Lesley A.;
Maxwell, Anthony

Publication type:

Article

Multimeric BLM is dissociated upon ATP hydrolysis and functions as monomers in resolving DNA structures.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9802, doi. 10.1093/nar/gks728

By:

Xu, Ya-Nan;
Bazeille, Nicolas;
Ding, Xiu-Yan;
Lu, Xi-Ming;
Wang, Peng-Ye;
Bugnard, Elisabeth;
Grondin, Virginie;
Dou, Shuo-Xing;
Xi, Xu Guang

Publication type:

Article

A small RNA response at DNA ends in Drosophila.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9596, doi. 10.1093/nar/gks711

By:

Michalik, Katharina M.;
Böttcher, Romy;
Förstemann, Klaus

Publication type:

Article

Intrinsic properties of Tcf1 and Tcf4 splice variants determine cell-type-specific Wnt/β-catenin target gene expression.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9455, doi. 10.1093/nar/gks690

By:

Wallmen, Britta;
Schrempp, Monika;
Hecht, Andreas

Publication type:

Article

The ATPase activity of Fml1 is essential for its roles in homologous recombination and DNA repair.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9584, doi. 10.1093/nar/gks715

By:

Nandi, Saikat;
Whitby, Matthew C.

Publication type:

Article

Structure and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9763, doi. 10.1093/nar/gks719

By:

Horton, John R.;
Mabuchi, Megumu Yamada;
Cohen-Karni, Devora;
Zhang, Xing;
Griggs, Rose M.;
Samaranayake, Mala;
Roberts, Richard J.;
Zheng, Yu;
Cheng, Xiaodong

Publication type:

Article

Nucleotide excision repair of 2-acetylaminofluorene- and 2-aminofluorene-(C8)-guanine adducts: molecular dynamics simulations elucidate how lesion structure and base sequence context impact repair efficiencies.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9675, doi. 10.1093/nar/gks788

By:

Mu, Hong;
Kropachev, Konstantin;
Wang, Lihua;
Zhang, Lu;
Kolbanovskiy, Alexander;
Kolbanovskiy, Marina;
E. Geacintov, Nicholas;
Broyde, Suse

Publication type:

Article

DNA of a circular minichromosome linearized by restriction enzymes or other reagents is resistant to further cleavage: an influence of chromatin topology on the accessibility of DNA.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9417, doi. 10.1093/nar/gks723

By:

Kumala, Sławomir;
Hadj-Sahraoui, Yasmina;
Rzeszowska-Wolny, Joanna;
Hancock, Ronald

Publication type:

Article

Ablation of PRMT6 reveals a role as a negative transcriptional regulator of the p53 tumor suppressor.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9513, doi. 10.1093/nar/gks764

By:

Neault, Mathieu;
Mallette, Frédérick A.;
Vogel, Gillian;
Michaud-Levesque, Jonathan;
Richard, Stéphane

Publication type:

Article

The processing of repetitive extragenic palindromes: the structure of a repetitive extragenic palindrome bound to its associated nuclease.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9964, doi. 10.1093/nar/gks741

By:

Messing, Simon A. J.;
Ton-Hoang, Bao;
Hickman, Alison B.;
McCubbin, Andrew J.;
Peaslee, Graham F.;
Ghirlando, Rodolfo;
Chandler, Michael;
Dyda, Fred

Publication type:

Article

Quantitative mass spectrometry and PAR-CLIP to identify RNA-protein interactions.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9897, doi. 10.1093/nar/gks746

By:

Scheibe, Marion;
Butter, Falk;
Hafner, Markus;
Tuschl, Thomas;
Mann, Matthias

Publication type:

Article

Transposon-mediated BAC transgenesis in human ES cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e150, doi. 10.1093/nar/gks643

By:

Rostovskaya, Maria;
Fu, Jun;
Obst, Mandy;
Baer, Isabell;
Weidlich, Stefanie;
Wang, Hailong;
Smith, Andrew J. H.;
Anastassiadis, Konstantinos;
Stewart, A. Francis

Publication type:

Article

PDGF enhances IRES-mediated translation of Laminin B1 by cytoplasmic accumulation of La during epithelial to mesenchymal transition.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9738, doi. 10.1093/nar/gks760

By:

Petz, Michaela;
Them, Nicole C. C.;
Huber, Heidemarie;
Mikulits, Wolfgang

Publication type:

Article

p53-Independent regulation of p21Waf1/Cip1 expression and senescence by PRMT6.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9534, doi. 10.1093/nar/gks858

By:

Phalke, Sameer;
Mzoughi, Slim;
Bezzi, Marco;
Jennifer, Nancy;
Mok, Wei Chuen;
Low, Diana H. P.;
Thike, Aye Aye;
Kuznetsov, Vladimir A.;
Tan, Puay Hoon;
Voorhoeve, P. Mathijs;
Guccione, Ernesto

Publication type:

Article

dKDM5/LID regulates H3K4me3 dynamics at the transcription-start site (TSS) of actively transcribed developmental genes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9493, doi. 10.1093/nar/gks773

By:

Lloret-Llinares, Marta;
Pérez-Lluch, Sílvia;
Rossell, David;
Morán, Tomás;
Ponsa-Cobas, Joan;
Auer, Herbert;
Corominas, Montserrat;
Azorín, Fernando

Publication type:

Article

microRNAs associated with the different human Argonaute proteins.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9850, doi. 10.1093/nar/gks705

By:

Dueck, Anne;
Ziegler, Christian;
Eichner, Alexander;
Berezikov, Eugene;
Meister, Gunter

Publication type:

Article

Motif effects in Affymetrix GeneChips seriously affect probe intensities.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9705, doi. 10.1093/nar/gks717

By:

Upton, Graham J. G.;
Harrison, Andrew P.

Publication type:

Article

2′-Deoxyriboguanylurea, the primary breakdown product of 5-aza-2′-deoxyribocytidine, is a mutagen, an epimutagen, an inhibitor of DNA methyltransferases and an inducer of 5-azacytidine-type fragile sites.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9788, doi. 10.1093/nar/gks706

By:

Lamparska, Katarzyna;
Clark, Jarrod;
Babilonia, Gail;
Bedell, Victoria;
Yip, Wesley;
Smith, Steven S.

Publication type:

Article

The arginine methyltransferase PRMT6 regulates cell proliferation and senescence through transcriptional repression of tumor suppressor genes.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9522, doi. 10.1093/nar/gks767

By:

Stein, Claudia;
Riedl, Stefanie;
Rüthnick, Diana;
Nötzold, René Reiner;
Bauer, Uta-Maria

Publication type:

Article

A single amino acid change in histone H4 enhances UV survival and DNA repair in yeast.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9981, doi. 10.1093/nar/gks924

By:

Nag, Ronita;
Gong, Feng;
Fahy, Deirdre;
Smerdon, Michael J.

Publication type:

Article

Recurrent transcriptional clusters in the genome of mouse pluripotent stem cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. e153, doi. 10.1093/nar/gks663

By:

Skylaki, Stavroula;
Tomlinson, Simon R.

Publication type:

Article

Toward a combinatorial nature of microRNA regulation in human cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9404, doi. 10.1093/nar/gks759

By:

Balaga, Ohad;
Friedman, Yitzhak;
Linial, Michal

Publication type:

Article

Cockayne Syndrome group B protein interacts with TRF2 and regulates telomere length and stability.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9661, doi. 10.1093/nar/gks745

By:

Batenburg, Nicole L.;
Mitchell, Taylor R. H.;
Leach, Derrik M.;
Rainbow, Andrew J.;
Zhu, Xu-Dong

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 19, p. iii, doi. 10.1093/nar/gks125
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 19, p. i, doi. 10.1093/nar/gks103
Publication type:: Article

Interaction of nucleolin with ribosomal RNA genes and its role in RNA polymerase I transcription.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9441, doi. 10.1093/nar/gks720

By:

Cong, Rong;
Das, Sadhan;
Ugrinova, Iva;
Kumar, Sanjeev;
Mongelard, Fabien;
Wong, Jiemin;
Bouvet, Philippe

Publication type:

Article

Subtypes of associated protein–DNA (Transcription Factor-Transcription Factor Binding Site) patterns.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9392, doi. 10.1093/nar/gks749

By:

Chan, Tak-Ming;
Leung, Kwong-Sak;
Lee, Kin-Hong;
Wong, Man-Hon;
Lau, Terrence Chi-Kong;
Tsui, Stephen Kwok-Wing

Publication type:

Article

Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9887, doi. 10.1093/nar/gks737

By:

Richter, Hagen;
Zoephel, Judith;
Schermuly, Jeanette;
Maticzka, Daniel;
Backofen, Rolf;
Randau, Lennart

Publication type:

Article

Silencing of Parkinson's disease-associated genes with artificial mirtron mimics of miR-1224.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 19, p. 9863, doi. 10.1093/nar/gks712

By:

Sibley, Christopher R.;
Seow, Yiqi;
Curtis, Helen;
Weinberg, Marc S.;
Wood, Matthew J. A.

Publication type:

Article