Works matching IS 03051048 AND DT 2012 AND VI 40 AND IP 17

Results: 60

Identification and analysis of hepatitis C virus NS3 helicase inhibitors using nucleic acid binding assays.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8607, doi. 10.1093/nar/gks623

By:

Mukherjee, Sourav;
Hanson, Alicia M.;
Shadrick, William R.;
Ndjomou, Jean;
Sweeney, Noreena L.;
Hernandez, John J.;
Bartczak, Diana;
Li, Kelin;
Frankowski, Kevin J.;
Heck, Julie A.;
Arnold, Leggy A.;
Schoenen, Frank J.;
Frick, David N.

Publication type:

Article

A new method for evaluating the specificity of indirect readout in protein–DNA recognition.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e129, doi. 10.1093/nar/gks462

By:

Yamasaki, Satoshi;
Terada, Tohru;
Kono, Hidetoshi;
Shimizu, Kentaro;
Sarai, Akinori

Publication type:

Article

CHK1 activity is required for continuous replication fork elongation but not stabilization of post-replicative gaps after UV irradiation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8440, doi. 10.1093/nar/gks646

By:

Elvers, Ingegerd;
Hagenkort, Anna;
Johansson, Fredrik;
Djureinovic, Tatjana;
Lagerqvist, Anne;
Schultz, Niklas;
Stoimenov, Ivaylo;
Erixon, Klaus;
Helleday, Thomas

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 17, p. ii, doi. 10.1093/nar/gks079
Publication type:: Article

Inverted Alu dsRNA structures do not affect localization but can alter translation efficiency of human mRNAs independent of RNA editing.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8637, doi. 10.1093/nar/gks590

By:

Capshew, Claire R.;
Dusenbury, Kristen L.;
Hundley, Heather A.

Publication type:

Article

Dynamics of transcription driven by the tetA promoter, one event at a time, in live Escherichia coli cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8472, doi. 10.1093/nar/gks583

By:

Muthukrishnan, Anantha-Barathi;
Kandhavelu, Meenakshisundaram;
Lloyd-Price, Jason;
Kudasov, Fedor;
Chowdhury, Sharif;
Yli-Harja, Olli;
Ribeiro, Andre S.

Publication type:

Article

Defining the DNA uptake specificity of naturally competent Haemophilus influenzae cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8536, doi. 10.1093/nar/gks640

By:

Mell, Joshua Chang;
Hall, Ira M.;
Redfield, Rosemary J.

Publication type:

Article

Spacer-length dependence of programmed −1 or −2 ribosomal frameshifting on a U6A heptamer supports a role for messenger RNA (mRNA) tension in frameshifting.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8674, doi. 10.1093/nar/gks629

By:

Lin, Zhaoru;
Gilbert, Robert J. C.;
Brierley, Ian

Publication type:

Article

HnRNP A1 phosphorylated by VRK1 stimulates telomerase and its binding to telomeric DNA sequence.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8499, doi. 10.1093/nar/gks634

By:

Choi, Yoon Ha;
Lim, Jong-Kwan;
Jeong, Min-Woo;
Kim, Kyong-Tai

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 17, p. i, doi. 10.1093/nar/gks101
Publication type:: Article

A highly specialized flavin mononucleotide riboswitch responds differently to similar ligands and confers roseoflavin resistance to Streptomyces davawensis.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8662, doi. 10.1093/nar/gks616

By:

Pedrolli, Danielle Biscaro;
Matern, Andreas;
Wang, Joy;
Ester, Miriam;
Siedler, Kathrin;
Breaker, Ronald;
Mack, Matthias

Publication type:

Article

RORγ directly regulates the circadian expression of clock genes and downstream targets in vivo.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8519, doi. 10.1093/nar/gks630

By:

Takeda, Yukimasa;
Jothi, Raja;
Birault, Veronique;
Jetten, Anton M.

Publication type:

Article

Involvement of microRNA families in cancer.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8219, doi. 10.1093/nar/gks627

By:

Wuchty, Stefan;
Arjona, Dolores;
Bozdag, Serdar;
Bauer, Peter O.

Publication type:

Article

Terminal deoxynucleotidyl transferase requires KU80 and XRCC4 to promote N-addition at non-V(D)J chromosomal breaks in non-lymphoid cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8381, doi. 10.1093/nar/gks585

By:

Boubakour-Azzouz, Imenne;
Bertrand, Pascale;
Claes, Aurélie;
Lopez, Bernard S.;
Rougeon, François

Publication type:

Article

p21 promotes error-free replication-coupled DNA double-strand break repair.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8348, doi. 10.1093/nar/gks612

By:

Mauro, Maurizio;
Rego, Meghan A.;
Boisvert, Rebecca A.;
Esashi, Fumiko;
Cavallo, Francesca;
Jasin, Maria;
Howlett, Niall G.

Publication type:

Article

Hfq proximity and orientation controls RNA annealing.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8690, doi. 10.1093/nar/gks618

By:

Panja, Subrata;
Woodson, Sarah A.

Publication type:

Article

Structural analysis and dimerization profile of the SCAN domain of the pluripotency factor Zfp206.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8721, doi. 10.1093/nar/gks611

By:

Liang, Yu;
Huimei Hong, Felicia;
Ganesan, Pugalenthi;
Jiang, Sizun;
Jauch, Ralf;
Stanton, Lawrence W.;
Kolatkar, Prasanna R.

Publication type:

Article

Amplification-free whole-genome bisulfite sequencing by post-bisulfite adaptor tagging.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e136, doi. 10.1093/nar/gks454

By:

Miura, Fumihito;
Enomoto, Yusuke;
Dairiki, Ryo;
Ito, Takashi

Publication type:

Article

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8646, doi. 10.1093/nar/gks609

By:

Talkish, Jason;
Zhang, Jingyu;
Jakovljevic, Jelena;
Horsey, Edward W.;
Woolford, John L.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2012, v. 40, n. 17, p. iii, doi. 10.1093/nar/gks123
Publication type:: Article

YB-1 binds to CAUC motifs and stimulates exon inclusion by enhancing the recruitment of U2AF to weak polypyrimidine tracts.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8622, doi. 10.1093/nar/gks579

By:

Wei, Wen-Juan;
Mu, Shi-Rong;
Heiner, Monika;
Fu, Xing;
Cao, Li-Juan;
Gong, Xiu-Feng;
Bindereif, Albrecht;
Hui, Jingyi

Publication type:

Article

Cell cycle-dependent regulation of the nuclease activity of Mus81–Eme1/Mms4.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8325, doi. 10.1093/nar/gks599

By:

Gallo-Fernández, María;
Saugar, Irene;
Ortiz-Bazán, María Ángeles;
Vázquez, María Victoria;
Tercero, José Antonio

Publication type:

Article

The sequential 2′,3′-cyclic phosphodiesterase and 3′-phosphate/5′-OH ligation steps of the RtcB RNA splicing pathway are GTP-dependent.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8558, doi. 10.1093/nar/gks558

By:

Chakravarty, Anupam K.;
Shuman, Stewart

Publication type:

Article

Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8276, doi. 10.1093/nar/gks628

By:

Hashimoto, Hideharu;
Zhang, Xing;
Cheng, Xiaodong

Publication type:

Article

RNA modulation of the human DNA methyltransferase 3A.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8550, doi. 10.1093/nar/gks537

By:

Holz-Schietinger, Celeste;
Reich, Norbert O.

Publication type:

Article

Dynamic hydroxymethylation of deoxyribonucleic acid marks differentiation-associated enhancers.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8255

By:

Sérandour, Aurélien A.;
Avner, Stéphane;
Oger, Frédérik;
Bizot, Maud;
Percevault, Frédéric;
Lucchetti-Miganeh, Céline;
Palierne, Gaëlle;
Gheeraert, Céline;
Barloy-Hubler, Frédérique;
Péron, Christine Le;
Madigou, Thierry;
Durand, Emmanuelle;
Froguel, Philippe;
Staels, Bart;
Lefebvre, Philippe;
Métivier, Raphaël;
Eeckhoute, Jérôme;
Salbert, Gilles

Publication type:

Article

Rational engineering of sequence specificity in R.MwoI restriction endonuclease.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8579, doi. 10.1093/nar/gks570

By:

Skowronek, Krzysztof;
Boniecki, Michal J.;
Kluge, Boguslaw;
Bujnicki, Janusz M.

Publication type:

Article

The wobble nucleotide-excising anticodon nuclease RloC is governed by the zinc-hook and DNA-dependent ATPase of its Rad50-like region.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8568, doi. 10.1093/nar/gks593

By:

Klaiman, Daniel;
Steinfels-Kohn, Emmanuelle;
Krutkina, Ekaterina;
Davidov, Elena;
Kaufmann, Gabriel

Publication type:

Article

Molecular engineering of G-quadruplex ligands based on solvent effect of polyethylene glycol.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8711, doi. 10.1093/nar/gks578

By:

Wang, Zi-Fu;
Chang, Ta-Chau

Publication type:

Article

NMDAR signaling facilitates the IPO5-mediated nuclear import of CPEB3.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8484, doi. 10.1093/nar/gks598

By:

Chao, Hsu-Wen;
Lai, Yen-Ting;
Lu, Yi-Ling;
Lin, Chi-long;
Mai, Wei;
Huang, Yi-Shuian

Publication type:

Article

The N-terminus of the human RecQL4 helicase is a homeodomain-like DNA interaction motif.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8309

By:

Ohlenschläger, Oliver;
Kuhnert, Anja;
Schneider, Annerose;
Haumann, Sebastian;
Bellstedt, Peter;
Keller, Heidi;
Saluz, Hans-Peter;
Hortschansky, Peter;
Hänel, Frank;
Grosse, Frank;
Görlach, Matthias;
Pospiech, Helmut

Publication type:

Article

The low-resolution solution structure of Vibrio cholerae Hfq in complex with Qrr1 sRNA.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8698, doi. 10.1093/nar/gks582

By:

Vincent, Helen A.;
Henderson, Charlotte A.;
Stone, Carlanne M.;
Cary, Peter D.;
Gowers, Darren M.;
Sobott, Frank;
Taylor, James E.;
Callaghan, Anastasia J.

Publication type:

Article

Insights into how nucleotide supplements enhance the peroxidase-mimicking DNAzyme activity of the G-quadruplex/hemin system.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8759, doi. 10.1093/nar/gks581

By:

Stefan, Loic;
Denat, Franck;
Monchaud, David

Publication type:

Article

Discovery, optimization and validation of an optimal DNA-binding sequence for the Six1 homeodomain transcription factor.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8227, doi. 10.1093/nar/gks587

By:

Liu, Yubing;
Nandi, Soumyadeep;
Martel, André;
Antoun, Alen;
Ioshikhes, Ilya;
Blais, Alexandre

Publication type:

Article

Radiation-induced double-strand breaks require ATM but not Artemis for homologous recombination during S-phase.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8336, doi. 10.1093/nar/gks604

By:

Köcher, Sabrina;
Rieckmann, Thorsten;
Rohaly, Gabor;
Mansour, Wael Y.;
Dikomey, Ekkehard;
Dornreiter, Irena;
Dahm-Daphi, Jochen

Publication type:

Article

Inferring direct DNA binding from ChIP-seq.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e128, doi. 10.1093/nar/gks433

By:

Bailey, Timothy L.;
Machanick, Philip

Publication type:

Article

Integrative analysis of gene and miRNA expression profiles with transcription factor–miRNA feed-forward loops identifies regulators in human cancers.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e135, doi. 10.1093/nar/gks395

By:

Yan, Zhenyu;
Shah, Parantu K.;
Amin, Samir B.;
Samur, Mehmet K.;
Huang, Norman;
Wang, Xujun;
Misra, Vikas;
Ji, Hongbin;
Gabuzda, Dana;
Li, Cheng

Publication type:

Article

MyoD regulates p57kip2 expression by interacting with a distant cis-element and modifying a higher order chromatin structure.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8266, doi. 10.1093/nar/gks619

By:

Busanello, Anna;
Battistelli, Cecilia;
Carbone, Mariarosaria;
Mostocotto, Cassandra;
Maione, Rossella

Publication type:

Article

RHON1 is a novel ribonucleic acid-binding protein that supports RNase E function in the Arabidopsis chloroplast.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8593, doi. 10.1093/nar/gks613

By:

Stoppel, Rhea;
Manavski, Nikolay;
Schein, Aleks;
Schuster, Gadi;
Teubner, Marlene;
Schmitz-Linneweber, Christian;
Meurer, Jörg

Publication type:

Article

Structure and activity of the only human RNase T2.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8733, doi. 10.1093/nar/gks614

By:

Thorn, Andrea;
Steinfeld, Robert;
Ziegenbein, Marc;
Grapp, Marcel;
Hsiao, He-Hsuan;
Urlaub, Henning;
Sheldrick, George M.;
Gärtner, Jutta;
Krätzner, Ralph

Publication type:

Article

Cooperative cluster formation, DNA bending and base-flipping by O6-alkylguanine-DNA alkyltransferase.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8296, doi. 10.1093/nar/gks574

By:

Tessmer, Ingrid;
Melikishvili, Manana;
Fried, Michael G.

Publication type:

Article

An in-depth map of polyadenylation sites in cancer.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8460, doi. 10.1093/nar/gks637

By:

Lin, Yuefeng;
Li, Zhihua;
Ozsolak, Fatih;
Kim, Sang Woo;
Arango-Argoty, Gustavo;
Liu, Teresa T.;
Tenenbaum, Scott A.;
Bailey, Timothy;
Monaghan, A. Paula;
Milos, Patrice M.;
John, Bino

Publication type:

Article

Camera: a competitive gene set test accounting for inter-gene correlation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e133, doi. 10.1093/nar/gks461

By:

Wu, Di;
Smyth, Gordon K.

Publication type:

Article

Replicative resolution of integron cassette insertion.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8361, doi. 10.1093/nar/gks620

By:

Loot, Céline;
Ducos-Galand, Magaly;
Escudero, José Antonio;
Bouvier, Marie;
Mazel, Didier

Publication type:

Article

Human Cockayne syndrome B protein reciprocally communicates with mitochondrial proteins and promotes transcriptional elongation.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8392, doi. 10.1093/nar/gks565

By:

Berquist, Brian R.;
Canugovi, Chandrika;
Sykora, Peter;
Wilson, David M.;
Bohr, Vilhelm A.

Publication type:

Article

Involvement of Werner syndrome protein in MUTYH-mediated repair of oxidative DNA damage.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8449, doi. 10.1093/nar/gks648

By:

Kanagaraj, Radhakrishnan;
Parasuraman, Prasanna;
Mihaljevic, Boris;
van Loon, Barbara;
Burdova, Kamila;
König, Christiane;
Furrer, Antonia;
Bohr, Vilhelm A.;
Hübscher, Ulrich;
Janscak, Pavel

Publication type:

Article

Modular control of multiple pathways using engineered orthogonal T7 polymerases.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8773, doi. 10.1093/nar/gks597

By:

Temme, Karsten;
Hill, Rena;
Segall-Shapiro, Thomas H.;
Moser, Felix;
Voigt, Christopher A.

Publication type:

Article

Chronic low-dose ultraviolet-induced mutagenesis in nucleotide excision repair-deficient cells.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. 8406, doi. 10.1093/nar/gks580

By:

Haruta, Nami;
Kubota, Yoshino;
Hishida, Takashi

Publication type:

Article

Enhanced multiplex genome engineering through co-operative oligonucleotide co-selection.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e132, doi. 10.1093/nar/gks455

By:

Carr, Peter A.;
Wang, Harris H.;
Sterling, Bram;
Isaacs, Farren J.;
Lajoie, Marc J.;
Xu, George;
Church, George M.;
Jacobson, Joseph M.

Publication type:

Article

Analyzing large biological datasets with association networks.

Published in:

Nucleic Acids Research, 2012, v. 40, n. 17, p. e131, doi. 10.1093/nar/gks403

By:

Karpinets, Tatiana V.;
Park, Byung H.;
Uberbacher, Edward C.

Publication type:

Article