Works matching IS 03051048 AND DT 2011 AND VI 39 AND IP 2

Results: 41

Walking of antitumor bifunctional trinuclear PtII complex on double-helical DNA.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 720, doi. 10.1093/nar/gkq803

By:

Malina, Jaroslav;
Kasparkova, Jana;
Farrell, Nicholas P.;
Brabec, Viktor

Publication type:

Article

Quantitative analysis of the efficiency and mutagenic spectra of abasic lesion bypass catalyzed by human Y-family DNA polymerases.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 609, doi. 10.1093/nar/gkq719

By:

Sherrer, Shanen M.;
Fiala, Kevin A.;
Fowler, Jason D.;
Newmister, Sean A.;
Pryor, John M.;
Suo, Zucai

Publication type:

Article

A highly conserved SOX6 double binding site mediates SOX6 gene downregulation in erythroid cells.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 486, doi. 10.1093/nar/gkq819

By:

Cantu', Claudio;
Grande, Vito;
Alborelli, Ilaria;
Cassinelli, Letizia;
Cantu’, Ileana;
Colzani, Maria Teresa;
Ierardi, Rossella;
Ronzoni, Luisa;
Cappellini, Maria Domenica;
Ferrari, Giuliana;
Ottolenghi, Sergio;
Ronchi, Antonella

Publication type:

Article

Tonicity-responsive microRNAs contribute to the maximal induction of osmoregulatory transcription factor OREBP in response to high-NaCl hypertonicity.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 475, doi. 10.1093/nar/gkq818

By:

Huang, Weifeng;
Liu, Huili;
Wang, Tao;
Zhang, Tiantian;
Kuang, Juntao;
Luo, Yu;
Chung, Stephen S. M.;
Yuan, Li;
Yang, James Y.

Publication type:

Article

A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 578, doi. 10.1093/nar/gkq817

By:

Liu, Song;
Lin, Lan;
Jiang, Peng;
Wang, Dan;
Xing, Yi

Publication type:

Article

A single amino acid change of translation termination factor eRF1 switches between bipotent and omnipotent stop-codon specificity†.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 599, doi. 10.1093/nar/gkq759

By:

Eliseev, Boris;
Kryuchkova, Polina;
Alkalaeva, Elena;
Frolova, Ludmila

Publication type:

Article

Dissecting endonuclease and exonuclease activities in endonuclease V from Thermotoga maritima.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 536

By:

Mi, Rongjuan;
Abole, Anne K.;
Cao, Weiguo

Publication type:

Article

Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 414, doi. 10.1093/nar/gkq780

By:

Chumsakul, Onuma;
Takahashi, Hiroki;
Oshima, Taku;
Hishimoto, Takahiro;
Kanaya, Shigehiko;
Ogasawara, Naotake;
Ishikawa, Shu

Publication type:

Article

The NIP7 protein is required for accurate pre-rRNA processing in human cells.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 648, doi. 10.1093/nar/gkq758

By:

Morello, Luis G.;
Hesling, Cédric;
Coltri, Patrícia P.;
Castilho, Beatriz A.;
Rimokh, Ruth;
Zanchin, Nilson I. T.

Publication type:

Article

Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 675, doi. 10.1093/nar/gkq776

By:

Brameier, Markus;
Herwig, Astrid;
Reinhardt, Richard;
Walter, Lutz;
Gruber, Jens

Publication type:

Article

Solution structures of DNA-bound gyrase.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 755, doi. 10.1093/nar/gkq799

By:

Baker, Nicole M.;
Weigand, Steven;
Maar-Mathias, Sarah;
Mondragón, Alfonso

Publication type:

Article

A novel method for the genome-wide high resolution analysis of DNA damage.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e10, doi. 10.1093/nar/gkq1036

By:

Teng, Yumin;
Bennett, Mark;
Evans, Katie E.;
Zhuang-Jackson, Huayun;
Higgs, Andy;
Reed, Simon H.;
Waters, Raymond

Publication type:

Article

Tissue-specific regulation of mouse MicroRNA genes in endoderm-derived tissues.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 454, doi. 10.1093/nar/gkq782

By:

Gao, Yan;
Schug, Jonathan;
McKenna, Lindsay B.;
Le Lay, John;
Kaestner, Klaus H.;
Greenbaum, Linda E.

Publication type:

Article

Determinants of eukaryal cell killing by the bacterial ribotoxin PrrC.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 687, doi. 10.1093/nar/gkq831

By:

Meineke, Birthe;
Schwer, Beate;
Schaffrath, Raffael;
Shuman, Stewart

Publication type:

Article

Targeted resequencing of candidate genes using selector probes.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e8, doi. 10.1093/nar/gkq1005

By:

Johansson, H.;
Isaksson, M.;
Sörqvist, E. Falk;
Roos, F.;
Stenberg, J.;
Sjöblom, T.;
Botling, J.;
Micke, P.;
Edlund, K.;
Fredriksson, S.;
Kultima, H. Göransson;
Ericsson, Olle;
Nilsson, Mats

Publication type:

Article

Cyclical regulation of the insulin-like growth factor binding protein 3 gene in response to 1α,25-dihydroxyvitamin D3.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 502, doi. 10.1093/nar/gkq820

By:

Malinen, Marjo;
Ryynänen, Jussi;
Heinäniemi, Merja;
Väisänen, Sami;
Carlberg, Carsten

Publication type:

Article

p53 activates the PANK1/miRNA-107 gene leading to downregulation of CDK6 and p130 cell cycle proteins.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 440, doi. 10.1093/nar/gkq796

By:

Böhlig, Levin;
Friedrich, Maik;
Engeland, Kurt

Publication type:

Article

PCAF interacts with XBP-1S and mediates XBP-1S-dependent transcription.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 429, doi. 10.1093/nar/gkq785

By:

Lew, Qiao Jing;
Chu, Kai Ling;
Lee, Jialing;
Koh, Poh Ling;
Rajasegaran, Vikneswari;
Teo, Jin Yuan;
Chao, Sheng-Hao

Publication type:

Article

The linker domain of basal transcription factor TFIIB controls distinct recruitment and transcription stimulation functions.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 464, doi. 10.1093/nar/gkq809

By:

Wiesler, Simone C.;
Weinzierl, Robert O. J.

Publication type:

Article

Improving the accuracy of predicting secondary structure for aligned RNA sequences.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 393, doi. 10.1093/nar/gkq792

By:

Hamada, Michiaki;
Sato, Kengo;
Asai, Kiyoshi

Publication type:

Article

Alternative translation start sites are conserved in eukaryotic genomes.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 567, doi. 10.1093/nar/gkq806

By:

Bazykin, Georgii A.;
Kochetov, Alex V.

Publication type:

Article

Human miR-1271 is a miR-96 paralog with distinct non-conserved brain expression pattern.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 701, doi. 10.1093/nar/gkq798

By:

Jensen, Kevin P.;
Covault, Jonathan

Publication type:

Article

Use of structural DNA properties for the prediction of transcription-factor binding sites in Escherichia coli.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e6, doi. 10.1093/nar/gkq1071

By:

Meysman, Pieter;
Dang, Thanh Hai;
Laukens, Kris;
De Smet, Riet;
Wu, Yan;
Marchal, Kathleen;
Engelen, Kristof

Publication type:

Article

Molecular basis of engineered meganuclease targeting of the endogenous human RAG1 locus.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 729

By:

Muñoz, Inés G.;
Prieto, Jesús;
Subramanian, Sunita;
Coloma, Javier;
Redondo, Pilar;
Villate, Maider;
Merino, Nekane;
Marenchino, Marco;
D'Abramo, Marco;
Gervasio, Francesco L.;
Grizot, Sylvestre;
Daboussi, Fayza;
Smith, Julianne;
Chion-Sotinel, Isabelle;
Pâques, Frédéric;
Duchateau, Philippe;
Alibés, Andreu;
Stricher, François;
Serrano, Luis;
Blanco, Francisco J.

Publication type:

Article

DNA intercalation without flipping in the specific ThaI–DNA complex.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 744, doi. 10.1093/nar/gkq834

By:

Firczuk, Malgorzata;
Wojciechowski, Marek;
Czapinska, Honorata;
Bochtler, Matthias

Publication type:

Article

DNA is a co-factor for its own replication in Xenopus egg extracts.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 545, doi. 10.1093/nar/gkq739

By:

Lebofsky, Ronald;
van Oijen, Antoine M.;
Walter, Johannes C.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 2, p. iii, doi. 10.1093/nar/gkr058
Publication type:: Article

Asymmetric DNA recognition by the OkrAI endonuclease, an isoschizomer of BamHI.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 712, doi. 10.1093/nar/gkq779

By:

Vanamee, Éva Scheuring;
Viadiu, Hector;
Chan, Siu-Hong;
Ummat, Ajay;
Hartline, Adrian M.;
Xu, Shuang-yong;
Aggarwal, Aneel K.

Publication type:

Article

Complementary non-radioactive assays for investigation of human flap endonuclease 1 activity.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e11, doi. 10.1093/nar/gkq1082

By:

Dorjsuren, Dorjbal;
Kim, Daemyung;
Maloney, David J.;
Wilson, David M.;
Simeonov, Anton

Publication type:

Article

On the molecular basis of uracil recognition in DNA: comparative study of T-A versus U-A structure, dynamics and open base pair kinetics.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 767, doi. 10.1093/nar/gkq812

By:

Fadda, Elisa;
Pomès, Régis

Publication type:

Article

Mutational and biochemical analysis of the DNA-entry nuclease EndA from Streptococcus pneumoniae.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 623, doi. 10.1093/nar/gkq802

By:

Midon, Marika;
Schäfer, Patrick;
Pingoud, Alfred;
Ghosh, Mahua;
Moon, Andrea F.;
Cuneo, Matthew J.;
London, Robert E.;
Meiss, Gregor

Publication type:

Article

Role of transcript and interplay between transcription and replication in triplet-repeat instability in mammalian cells.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 526, doi. 10.1093/nar/gkq788

By:

Rindler, Paul M.;
Bidichandani, Sanjay I.

Publication type:

Article

Gene expression variations are predictive for stochastic noise.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 403, doi. 10.1093/nar/gkq844

By:

Dong, Dong;
Shao, Xiaojian;
Deng, Naiyang;
Zhang, Zhaolei

Publication type:

Article

HIV-1 RT-dependent DNAzyme expression inhibits HIV-1 replication without the emergence of escape viruses.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 589, doi. 10.1093/nar/gkq794

By:

Sugiyama, Ryuichi;
Hayafune, Masaaki;
Habu, Yuichiro;
Yamamoto, Norio;
Takaku, Hiroshi

Publication type:

Article

The human Pat1b protein: a novel mRNA deadenylation factor identified by a new immunoprecipitation technique.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 635, doi. 10.1093/nar/gkq797

By:

Totaro, Antonio;
Renzi, Fabrizio;
La Fata, Giorgio;
Mattioli, Claudia;
Raabe, Monika;
Urlaub, Henning;
Achsel, Tilmann

Publication type:

Article

mRNA degradation controls differentiation state-dependent differences in transcript and splice variant abundance.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 556, doi. 10.1093/nar/gkq790

By:

't Hoen, Peter A. C.;
Hirsch, Michael;
Meijer, Emile J. de;
Menezes, Renée X. de;
van Ommen, Gertjan G.J.;
Dunnen, Johan T. den

Publication type:

Article

Steroid receptor RNA activator protein binds to and counteracts SRA RNA-mediated activation of MyoD and muscle differentiation.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 513, doi. 10.1093/nar/gkq833

By:

Hubé, Florent;
Velasco, Guillaume;
Rollin, Jérôme;
Furling, Denis;
Francastel, Claire

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 2, p. i, doi. 10.1093/nar/gkr056
Publication type:: Article

High-level expression by tissue/cancer-specific promoter with strict specificity using a single-adenoviral vector.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e7, doi. 10.1093/nar/gkq966

By:

Kanegae, Yumi;
Terashima, Miho;
Kondo, Saki;
Fukuda, Hiromitsu;
Maekawa, Aya;
Pei, Zheng;
Saito, Izumu

Publication type:

Article

Accurate quantification of transcriptome from RNA-Seq data by effective length normalization.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. e9, doi. 10.1093/nar/gkq1015

By:

Lee, Soohyun;
Seo, Chae Hwa;
Lim, Byungho;
Yang, Jin Ok;
Oh, Jeongsu;
Kim, Minjin;
Lee, Sooncheol;
Lee, Byungwook;
Kang, Changwon;
Lee, Sanghyuk

Publication type:

Article

Co-regulation of alternative splicing by diverse splicing factors in Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 2, p. 666, doi. 10.1093/nar/gkq767

By:

Barberan-Soler, Sergio;
Medina, Pedro;
Estella, Jeffrey;
Williams, James;
Zahler, Alan M.

Publication type:

Article