Works matching IS 03051048 AND DT 2011 AND VI 39 AND IP 18

Results: 41

Identification of an hepatitis delta virus-like ribozyme at the mRNA 5′-end of the L1Tc retrotransposon from Trypanosoma cruzi.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8065, doi. 10.1093/nar/gkr478

By:

Sánchez-Luque, Francisco J.;
López, Manuel C.;
Macias, Francisco;
Alonso, Carlos;
Thomas, M. Carmen

Publication type:

Article

Structural basis for the cooperative DNA recognition by Smad4 MH1 dimers.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8213, doi. 10.1093/nar/gkr500

By:

Baburajendran, Nithya;
Jauch, Ralf;
Tan, Clara Yueh Zhen;
Narasimhan, Kamesh;
Kolatkar, Prasanna R.

Publication type:

Article

Nucleic Acids Research - Editorial Board.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 18, p. ii, doi. 10.1093/nar/gkr877
Publication type:: Article

Broad-spectrum aptamer inhibitors of HIV reverse transcriptase closely mimic natural substrates.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8237, doi. 10.1093/nar/gkr381

By:

Ditzler, Mark A.;
Bose, Debojit;
Shkriabai, Nikolozi;
Marchand, Bruno;
Sarafianos, Stefan G.;
Kvaratskhelia, Mamuka;
Burke, Donald H.

Publication type:

Article

PhenomeNET: a whole-phenome approach to disease gene discovery.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e119, doi. 10.1093/nar/gkr538

By:

Hoehndorf, Robert;
Schofield, Paul N.;
Gkoutos, Georgios V.

Publication type:

Article

Correction of the consequences of mitochondrial 3243A>G mutation in the MT-TL1 gene causing the MELAS syndrome by tRNA import into mitochondria.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8173, doi. 10.1093/nar/gkr546

By:

Karicheva, Olga Z.;
Kolesnikova, Olga A.;
Schirtz, Tom;
Vysokikh, Mikhail Y.;
Mager-Heckel, Anne-Marie;
Lombès, Anne;
Boucheham, Abdeldjalil;
Krasheninnikov, Igor A.;
Martin, Robert P.;
Entelis, Nina;
Tarassov, Ivan

Publication type:

Article

Towards resolving the transcription factor network controlling myelin gene expression.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7974, doi. 10.1093/nar/gkr326

By:

Fulton, Debra L.;
Denarier, Eric;
Friedman, Hana C.;
Wasserman, Wyeth W.;
Peterson, Alan C.

Publication type:

Article

Comprehensive exon array data processing method for quantitative analysis of alternative spliced variants.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e123, doi. 10.1093/nar/gkr513

By:

Chen, Ping;
Lepikhova, Tatiana;
Hu, Yizhou;
Monni, Outi;
Hautaniemi, Sampsa

Publication type:

Article

CKI isoforms α and ɛ regulate Star–PAP target messages by controlling Star–PAP poly(A) polymerase activity and phosphoinositide stimulation.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7961, doi. 10.1093/nar/gkr549

By:

Laishram, Rakesh S.;
Barlow, Christy A.;
Anderson, Richard A.

Publication type:

Article

Molecular design of a splicing switch responsive to the RNA binding protein Tra2β.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8092, doi. 10.1093/nar/gkr495

By:

Grellscheid, Sushma Nagaraja;
Dalgliesh, Caroline;
Rozanska, Agata;
Grellscheid, David;
Bourgeois, Cyril F.;
Stévenin, James;
Elliott, David J.

Publication type:

Article

Precise BAC targeting of genetically polymorphic mouse ES cells.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e121, doi. 10.1093/nar/gkr550

By:

Barakat, Tahsin Stefan;
Rentmeester, Eveline;
Sleutels, Frank;
Grootegoed, J. Anton;
Gribnau, Joost

Publication type:

Article

ASF1A and ATM regulate H3K56-mediated cell-cycle checkpoint recovery in response to UV irradiation.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7931, doi. 10.1093/nar/gkr523

By:

Battu, Aruna;
Ray, Alo;
Wani, Altaf A.

Publication type:

Article

Patient mutation in AIRE disrupts P-TEFb binding and target gene transcription.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7908, doi. 10.1093/nar/gkr527

By:

Žumer, Kristina;
Plemenitaš, Ana;
Saksela, Kalle;
Peterlin, B. Matija

Publication type:

Article

Specific DNA structural attributes modulate platinum anticancer drug site selection and cross-link generation.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8200, doi. 10.1093/nar/gkr491

By:

Wu, Bin;
Davey, Gabriela E.;
Nazarov, Alexey A.;
Dyson, Paul J.;
Davey, Curt A.

Publication type:

Article

Whole-transcriptome RNAseq analysis from minute amount of total RNA.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e120, doi. 10.1093/nar/gkr547

By:

Tariq, Muhammad A.;
Kim, Hyunsung J.;
Jejelowo, Olufisayo;
Pourmand, Nader

Publication type:

Article

Modulation of the stability of the Salmonella fourU-type RNA thermometer.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8258, doi. 10.1093/nar/gkr314

By:

Rinnenthal, Jörg;
Klinkert, Birgit;
Narberhaus, Franz;
Schwalbe, Harald

Publication type:

Article

Ubiquitination of human AP-endonuclease 1 (APE1) enhanced by T233E substitution and by CDK5.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8017, doi. 10.1093/nar/gkr401

By:

Busso, Carlos S.;
Wedgeworth, Courtney M.;
Izumi, Tadahide

Publication type:

Article

Flexible tethering of primase and DNA Pol α in the eukaryotic primosome.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8187

By:

Núñez-Ramírez, Rafael;
Klinge, Sebastian;
Sauguet, Ludovic;
Melero, Roberto;
Recuero-Checa, María A.;
Kilkenny, Mairi;
Perera, Rajika L.;
García-Alvarez, Begoña;
Hall, Richard J.;
Nogales, Eva;
Pellegrini, Luca;
Llorca, Oscar

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 18, p. iii, doi. 10.1093/nar/gkr870
Publication type:: Article

Internal standard-based analysis of microarray data2—Analysis of functional associations between HVE-genes.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7881, doi. 10.1093/nar/gkr503

By:

Dozmorov, Igor M.;
Jarvis, James;
Saban, Ricardo;
Benbrook, Doris M.;
Wakeland, Edward;
Aksentijevich, Ivona;
Ryan, John;
Chiorazzi, Nicholas;
Guthridge, Joel M.;
Drewe, Elizabeth;
Tighe, Patrick J.;
Centola, Michael;
Lefkovits, Ivan

Publication type:

Article

Elucidation of the assembly events required for the recruitment of Utp20, Imp4 and Bms1 onto nascent pre-ribosomes.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8105

By:

Pérez-Fernández, Jorge;
Martín-Marcos, Pilar;
Dosil, Mercedes

Publication type:

Article

Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8223, doi. 10.1093/nar/gkr543

By:

Shen, Betty W.;
Xu, Derrick;
Chan, Siu-Hong;
Zheng, Yu;
Zhu, Zhenyu;
Xu, Shuang-yong;
Stoddard, Barry L.

Publication type:

Article

A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8029, doi. 10.1093/nar/gkr511

By:

Kühl, Inge;
Dujeancourt, Laurent;
Gaisne, Mauricette;
Herbert, Christopher J.;
Bonnefoy, Nathalie

Publication type:

Article

Experimental mapping of soluble protein domains using a hierarchical approach.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e125, doi. 10.1093/nar/gkr548

By:

Pedelacq, Jean-Denis;
Nguyen, Hau B.;
Cabantous, Stephanie;
Mark, Brian L.;
Listwan, Pawel;
Bell, Carolyn;
Friedland, Natasha;
Lockard, Meghan;
Faille, Alexandre;
Mourey, Lionel;
Terwilliger, Thomas C.;
Waldo, Geoffrey S.

Publication type:

Article

MicroRNA-296 is enriched in cancer cells and downregulates p21WAF1 mRNA expression via interaction with its 3′ untranslated region.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8078, doi. 10.1093/nar/gkr492

By:

Yoon, A-rum;
Gao, Ran;
Kaul, Zeenia;
Choi, Il-Kyu;
Ryu, Jihoon;
Noble, Jane R.;
Kato, Yoshio;
Saito, Soichiro;
Hirano, Takashi;
Ishii, Tetsuro;
Reddel, Roger R.;
Yun, Chae-Ok;
Kaul, Sunil C.;
Wadhwa, Renu

Publication type:

Article

Dynamic usage of alternative splicing exons during mouse retina development.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7920, doi. 10.1093/nar/gkr545

By:

Wan, Jun;
Masuda, Tomohiro;
Hackler, Laszlo;
Torres, Kieron M.;
Merbs, Shannath L.;
Zack, Donald J.;
Qian, Jiang

Publication type:

Article

Fluorescence protection assay: a novel homogeneous assay platform toward development of aptamer sensors for protein detection.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e122, doi. 10.1093/nar/gkr559

By:

Wang, Hong-Qi;
Wu, Zhan;
Tang, Li-Juan;
Yu, Ru-Qin;
Jiang, Jian-Hui

Publication type:

Article

Structural determinants of TAR RNA-DNA annealing in the absence and presence of HIV-1 nucleocapsid protein.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8148, doi. 10.1093/nar/gkr526

By:

Kanevsky, Igor;
Chaminade, Françoise;
Chen, Yingying;
Godet, Julien;
René, Brigitte;
Darlix, Jean-Luc;
Mély, Yves;
Mauffret, Olivier;
Fossé, Philippe

Publication type:

Article

Native mass spectrometry provides direct evidence for DNA mismatch-induced regulation of asymmetric nucleotide binding in mismatch repair protein MutS.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8052, doi. 10.1093/nar/gkr498

By:

Monti, Maria Chiara;
Cohen, Serge X.;
Fish, Alexander;
Winterwerp, Herrie H. K.;
Barendregt, Arjan;
Friedhoff, Peter;
Perrakis, Anastassis;
Heck, Albert J. R.;
Sixma, Titia K.;
van den Heuvel, Robert H. H.;
Lebbink, Joyce H. G.

Publication type:

Article

Specific sequence determinants of miR-15/107 microRNA gene group targets.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8163, doi. 10.1093/nar/gkr532

By:

Nelson, Peter T.;
Wang, Wang-Xia;
Mao, Guogen;
Wilfred, Bernard R.;
Xie, Kevin;
Jennings, Mary H.;
Gao, Zhen;
Wang, Xiaowei

Publication type:

Article

XRCC1 haploinsufficiency in mice has little effect on aging, but adversely modifies exposure-dependent susceptibility.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7992, doi. 10.1093/nar/gkr280

By:

McNeill, Daniel R.;
Lin, Ping-Chang;
Miller, Marshall G.;
Pistell, Paul J.;
de Souza-Pinto, Nadja C.;
Fishbein, Kenneth W.;
Spencer, Richard G.;
Liu, Yie;
Pettan-Brewer, Christina;
Ladiges, Warren C.;
Wilson, David M.

Publication type:

Article

A multifactor regulatory circuit involving H-NS, VirF and an antisense RNA modulates transcription of the virulence gene icsA of Shigella flexneri.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8122, doi. 10.1093/nar/gkr521

By:

Tran, Chi Nhan;
Giangrossi, Mara;
Prosseda, Gianni;
Brandi, Anna;
Di Martino, Maria Letizia;
Colonna, Bianca;
Falconi, Maurizio

Publication type:

Article

Next-generation insights into regulatory T cells: expression profiling and FoxP3 occupancy in Human.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7946, doi. 10.1093/nar/gkr444

By:

Birzele, Fabian;
Fauti, Tanja;
Stahl, Heiko;
Lenter, Martin C.;
Simon, Eric;
Knebel, Dagmar;
Weith, Andreas;
Hildebrandt, Tobias;
Mennerich, Detlev

Publication type:

Article

Quantification noise in single cell experiments.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e124, doi. 10.1093/nar/gkr505

By:

Reiter, M.;
Kirchner, B.;
Müller, H.;
Holzhauer, C.;
Mann, W.;
Pfaffl, M. W.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 18, p. i, doi. 10.1093/nar/gkr876
Publication type:: Article

STEME: efficient EM to find motifs in large data sets.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. e126, doi. 10.1093/nar/gkr574

By:

Reid, John E.;
Wernisch, Lorenz

Publication type:

Article

DNA cleavage site selection by Type III restriction enzymes provides evidence for head-on protein collisions following 1D bidirectional motion.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8042, doi. 10.1093/nar/gkr502

By:

Schwarz, Friedrich W.;
van Aelst, Kara;
Tóth, Júlia;
Seidel, Ralf;
Szczelkun, Mark D.

Publication type:

Article

The prebiotic evolutionary advantage of transferring genetic information from RNA to DNA.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8135, doi. 10.1093/nar/gkr525

By:

Leu, Kevin;
Obermayer, Benedikt;
Rajamani, Sudha;
Gerland, Ulrich;
Chen, Irene A.

Publication type:

Article

Temperature-induced melting of double-stranded DNA in the absence and presence of covalently bonded antitumour drugs: insight from molecular dynamics simulations.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8248, doi. 10.1093/nar/gkr512

By:

Bueren-Calabuig, Juan A.;
Giraudon, Christophe;
Galmarini, Carlos M.;
Egly, Jean Marc;
Gago, Federico

Publication type:

Article

A global insight into a cancer transcriptional space using pancreatic data: importance, findings and flaws.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 7900, doi. 10.1093/nar/gkr533

By:

Gadaleta, Emanuela;
Cutts, Rosalind J.;
Kelly, Gavin P.;
Crnogorac-Jurcevic, Tatjana;
Kocher, Hemant M.;
Lemoine, Nicholas R.;
Chelala, Claude

Publication type:

Article

Zinc-finger transcription factors are associated with guanine quadruplex motifs in human, chimpanzee, mouse and rat promoters genome-wide.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 18, p. 8005, doi. 10.1093/nar/gkr536

By:

Kumar, Pankaj;
Yadav, Vinod Kumar;
Baral, Aradhita;
Kumar, Parveen;
Saha, Dhurjhoti;
Chowdhury, Shantanu

Publication type:

Article