Works matching IS 03051048 AND DT 2011 AND VI 39 AND IP 1

Results: 39

Identification of preferential target sites for human DNA methyltransferases.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 104, doi. 10.1093/nar/gkq774

By:

Choi, Si Ho;
Heo, Kyu;
Byun, Hyang-Min;
An, Woojin;
Lu, Wange;
Yang, Allen S.

Publication type:

Article

Structure and function of the Rad9-binding region of the DNA-damage checkpoint adaptor TopBP1.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 313, doi. 10.1093/nar/gkq743

By:

Rappas, Mathieu;
Oliver, Antony W.;
Pearl, Laurence H.

Publication type:

Article

Allele dynamics plots for the study of evolutionary dynamics in viral populations.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. e4, doi. 10.1093/nar/gkq909

By:

Steinbrück, Lars;
McHardy, Alice Carolyn

Publication type:

Article

Analysis of two human pre-ribosomal factors, bystin and hTsr1, highlights differences in evolution of ribosome biogenesis between yeast and mammals.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 280, doi. 10.1093/nar/gkq734

By:

Carron, Coralie;
O’Donohue, Marie-Françoise;
Choesmel, Valérie;
Faubladier, Marlène;
Gleizes, Pierre-Emmanuel

Publication type:

Article

Coupling of transcription and replication machineries in λ DNA replication initiation: evidence for direct interaction of Escherichia coli RNA polymerase and the λO protein.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 168, doi. 10.1093/nar/gkq752

By:

Szambowska, Anna;
Pierechod, Marcin;
Węgrzyn, Grzegorz;
Glinkowska, Monika

Publication type:

Article

Improved deoxyribozymes for synthesis of covalently branched DNA and RNA.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 269, doi. 10.1093/nar/gkq753

By:

Lee, Christine S.;
Mui, Timothy P.;
Silverman, Scott K.

Publication type:

Article

Natural and engineered nicking endonucleases—from cleavage mechanism to engineering of strand-specificity.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 1, doi. 10.1093/nar/gkq742

By:

Chan, Siu-Hong;
Stoddard, Barry L.;
Xu, Shuang-yong

Publication type:

Article

Visualizing RAD51-mediated joint molecules: implications for recombination mechanism and the effect of sequence heterology.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 155, doi. 10.1093/nar/gkq766

By:

Ristic, D.;
Kanaar, R.;
Wyman, C.

Publication type:

Article

BRCC36A is epistatic to BRCA1 in DNA crosslink repair and homologous recombination in Arabidopsis thaliana.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 146, doi. 10.1093/nar/gkq722

By:

Block-Schmidt, Astrid S.;
Dukowic-Schulze, Stefanie;
Wanieck, Kristina;
Reidt, Wim;
Puchta, Holger

Publication type:

Article

Efficient use of accessibility in microRNA target prediction.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 19, doi. 10.1093/nar/gkq768

By:

Marín, Ray M.;
Vaníček, Jiří

Publication type:

Article

Position-dependent effects on stability in tricyclo-DNA modified oligonucleotide duplexes.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 373, doi. 10.1093/nar/gkq733

By:

Ittig, Damian;
Gerber, Anna-Barbara;
Leumann, Christian J.

Publication type:

Article

Modular pathways for editing non-cognate amino acids by human cytoplasmic leucyl-tRNA synthetase.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 235, doi. 10.1093/nar/gkq763

By:

Chen, Xin;
Ma, Jing-Jing;
Tan, Min;
Yao, Peng;
Hu, Qing-Hua;
Eriani, Gilbert;
Wang, En-Duo

Publication type:

Article

The many paths to frameshifting: kinetic modelling and analysis of the effects of different elongation steps on programmed –1 ribosomal frameshifting.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 300, doi. 10.1093/nar/gkq761

By:

Liao, Pei-Yu;
Choi, Yong Seok;
Dinman, Jonathan D.;
Lee, Kelvin H.

Publication type:

Article

Structural insights into cis element recognition of non-polyadenylated RNAs by the Nab3-RRM.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 337, doi. 10.1093/nar/gkq751

By:

Lunde, Bradley M.;
Hörner, Maximilian;
Meinhart, Anton

Publication type:

Article

Allotopic expression of mitochondrial-encoded genes in mammals: achieved goal, undemonstrated mechanism or impossible task?

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 225, doi. 10.1093/nar/gkq769

By:

Perales-Clemente, Ester;
Fernández-Silva, Patricio;
Acín-Pérez, Rebeca;
Pérez-Martos, Acisclo;
Enríquez, Jose Antonio

Publication type:

Article

TAL nucleases (TALNs): hybrid proteins composed of TAL effectors and FokI DNA-cleavage domain.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 359, doi. 10.1093/nar/gkq704

By:

Li, Ting;
Huang, Sheng;
Jiang, Wen Zhi;
Wright, David;
Spalding, Martin H.;
Weeks, Donald P.;
Yang, Bing

Publication type:

Article

MEF/ELF4 transactivation by E2F1 is inhibited by p53.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 76, doi. 10.1093/nar/gkq762

By:

Taura, Manabu;
Suico, Mary Ann;
Fukuda, Ryosuke;
Koga, Tomoaki;
Shuto, Tsuyoshi;
Sato, Takashi;
Morino-Koga, Saori;
Okada, Seiji;
Kai, Hirofumi

Publication type:

Article

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 190, doi. 10.1093/nar/gkq775

By:

Sun, Hao;
Wu, Jiejun;
Wickramasinghe, Priyankara;
Pal, Sharmistha;
Gupta, Ravi;
Bhattacharyya, Anirban;
Agosto-Perez, Francisco J.;
Showe, Louise C.;
Huang, Tim H.-M.;
Davuluri, Ramana V.

Publication type:

Article

Zinc finger protein-dependent and -independent contributions to the in vivo off-target activity of zinc finger nucleases.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 381, doi. 10.1093/nar/gkq787

By:

Gupta, Ankit;
Meng, Xiangdong;
Zhu, Lihua J.;
Lawson, Nathan D.;
Wolfe, Scot A.

Publication type:

Article

Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 248, doi. 10.1093/nar/gkq713

By:

Davidson, Amy;
Patora-Komisarska, Krystyna;
Robinson, John A.;
Varani, Gabriele

Publication type:

Article

Ice-COLD-PCR enables rapid amplification and robust enrichment for low-abundance unknown DNA mutations.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. e2, doi. 10.1093/nar/gkq899

By:

Milbury, Coren A.;
Li, Jin;
Makrigiorgos, G. Mike

Publication type:

Article

Visualization of the protein-coding regions with a self adaptive spectral rotation approach.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. e3, doi. 10.1093/nar/gkq891

By:

Chen, Bo;
Ji, Ping

Publication type:

Article

The phosphate clamp: a small and independent motif for nucleic acid backbone recognition.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 325, doi. 10.1093/nar/gkq723

By:

Komeda, Seiji;
Moulaei, Tinoush;
Chikuma, Masahiko;
Odani, Akira;
Kipping, Ralph;
Farrell, Nicholas P.;
Williams, Loren Dean

Publication type:

Article

Strict control of transgene expression in a mouse model for sensitive biological applications based on RMCE compatible ES cells.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. e1, doi. 10.1093/nar/gkq868

By:

Sandhu, U.;
Cebula, M.;
Behme, S.;
Riemer, P.;
Wodarczyk, C.;
Metzger, D.;
Reimann, J.;
Schirmbeck, R.;
Hauser, H.;
Wirth, D.

Publication type:

Article

Structural basis of microRNA length variety.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 257, doi. 10.1093/nar/gkq727

By:

Starega-Roslan, Julia;
Krol, Jacek;
Koscianska, Edyta;
Kozlowski, Piotr;
Szlachcic, Wojciech J.;
Sobczak, Krzysztof;
Krzyzosiak, Wlodzimierz J.

Publication type:

Article

M-ORBIS: Mapping of mOleculaR Binding sItes and Surfaces.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 30, doi. 10.1093/nar/gkq736

By:

Albou, Laurent-Philippe;
Poch, Olivier;
Moras, Dino

Publication type:

Article

MethylViewer: computational analysis and editing for bisulfite sequencing and methyltransferase accessibility protocol for individual templates (MAPit) projects.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. e5, doi. 10.1093/nar/gkq716

By:

Pardo, Carolina E.;
Carr, Ian M.;
Hoffman, Christopher J.;
Darst, Russell P.;
Markham, Alexander F.;
Bonthron, David T.;
Kladde, Michael P.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 1, p. i, doi. 10.1093/nar/gkr001
Publication type:: Article

The cyclin-dependent kinase inhibitor p21 is regulated by RNA-binding protein PCBP4 via mRNA stability.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 213, doi. 10.1093/nar/gkq778

By:

Scoumanne, Ariane;
Cho, Seong Jun;
Zhang, Jin;
Chen, Xinbin

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2011, v. 39, n. 1, p. iii, doi. 10.1093/nar/gkr003
Publication type:: Article

Reverse crosstalk of TGFβ and PPARβ/δ signaling identified by transcriptional profiling.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 119, doi. 10.1093/nar/gkq773

By:

Stockert, Josefine;
Adhikary, Till;
Kaddatz, Kerstin;
Finkernagel, Florian;
Meissner, Wolfgang;
Müller-Brüsselbach, Sabine;
Müller, Rolf

Publication type:

Article

Crucial contribution of the multiple copies of the initiator tRNA genes in the fidelity of tRNAfMet selection on the ribosomal P-site in Escherichia coli.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 202, doi. 10.1093/nar/gkq760

By:

Kapoor, Suman;
Das, Gautam;
Varshney, Umesh

Publication type:

Article

The ends of a large RNA molecule are necessarily close.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 292, doi. 10.1093/nar/gkq642

By:

Yoffe, Aron M.;
Prinsen, Peter;
Gelbart, William M.;
Ben-Shaul, Avinoam

Publication type:

Article

Highly redundant function of multiple AT-rich sequences as core promoter elements in the TATA-less RPS5 promoter of Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 59, doi. 10.1093/nar/gkq741

By:

Sugihara, Fuminori;
Kasahara, Koji;
Kokubo, Tetsuro

Publication type:

Article

The splicing-factor related protein SFPQ/PSF interacts with RAD51D and is necessary for homology-directed repair and sister chromatid cohesion.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 132, doi. 10.1093/nar/gkq738

By:

Rajesh, Changanamkandath;
Baker, Dustin K.;
Pierce, Andrew J.;
Pittman, Douglas L.

Publication type:

Article

Characterization of SMG-9, an essential component of the nonsense-mediated mRNA decay SMG1C complex.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 347

By:

Fernández, Israel S.;
Yamashita, Akio;
Arias-Palomo, Ernesto;
Bamba, Yumi;
Bartolomé, Ruben A.;
Canales, M. Angeles;
Teixidó, Joaquín;
Ohno, Shigeo;
Llorca, Oscar

Publication type:

Article

Human single-nucleotide polymorphisms alter p53 sequence-specific binding at gene regulatory elements.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 178, doi. 10.1093/nar/gkq764

By:

Bandele, Omari J.;
Wang, Xuting;
Campbell, Michelle R.;
Pittman, Gary S.;
Bell, Douglas A.

Publication type:

Article

Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 44, doi. 10.1093/nar/gkq750

By:

Wang, Wenyi;
Shen, Peidong;
Thiyagarajan, Sreedevi;
Lin, Shengrong;
Palm, Curtis;
Horvath, Rita;
Klopstock, Thomas;
Cutler, David;
Pique, Lynn;
Schrijver, Iris;
Davis, Ronald W.;
Mindrinos, Michael;
Speed, Terence P.;
Scharfe, Curt

Publication type:

Article

An insulator embedded in the chicken α-globin locus regulates chromatin domain configuration and differential gene expression.

Published in:

Nucleic Acids Research, 2011, v. 39, n. 1, p. 89, doi. 10.1093/nar/gkq740

By:

Furlan-Magaril, Mayra;
Rebollar, Eria;
Guerrero, Georgina;
Fernández, Almudena;
Moltó, Eduardo;
González-Buendía, Edgar;
Cantero, Marta;
Montoliu, Lluís;
Recillas-Targa, Félix

Publication type:

Article