Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 21

Results: 53

PARP1 suppresses homologous recombination events in mice in vivo.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7538, doi. 10.1093/nar/gkq624

By:

Claybon, Alison;
Karia, Bijal;
Bruce, Crystal;
Bishop, Alexander J. R.

Publication type:

Article

Plant mitochondria use two pathways for the biogenesis of tRNAHis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7711, doi. 10.1093/nar/gkq646

By:

Placido, Antonio;
Sieber, François;
Gobert, Anthony;
Gallerani, Raffaele;
Giegé, Philippe;
Maréchal-Drouard, Laurence

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 21, p. ii, doi. 10.1093/nar/gkq1260
Publication type:: Article

Hybridization properties of long nucleic acid probes for detection of variable target sequences, and development of a hybridization prediction algorithm.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. e195

By:

Öhrmalm, Christina;
Jobs, Magnus;
Eriksson, Ronnie;
Golbob, Sultan;
Elfaitouri, Amal;
Benachenhou, Farid;
Strømme, Maria;
Blomberg, Jonas

Publication type:

Article

Synthesis and biological activity of artificial mRNA prepared with novel phosphorylating reagents.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7845, doi. 10.1093/nar/gkq638

By:

Nagata, Seigo;
Hamasaki, Tomohiro;
Uetake, Koichi;
Masuda, Hirofumi;
Takagaki, Kazuchika;
Oka, Natsuhisa;
Wada, Takeshi;
Ohgi, Tadaaki;
Yano, Junichi

Publication type:

Article

Global regulation of alternative splicing during myogenic differentiation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7651, doi. 10.1093/nar/gkq614

By:

Bland, Christopher S.;
Wang, Eric T.;
Vu, Anthony;
David, Marjorie P.;
Castle, John C.;
Johnson, Jason M.;
Burge, Christopher B.;
Cooper, Thomas A.

Publication type:

Article

The role of transcription factories-mediated interchromosomal contacts in the organization of nuclear architecture.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7410, doi. 10.1093/nar/gkq666

By:

Dorier, Julien;
Stasiak, Andrzej

Publication type:

Article

Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. e197, doi. 10.1093/nar/gkq807

By:

Timmermans, M. J. T. N.;
Dodsworth, S.;
Culverwell, C. L.;
Bocak, L.;
Ahrens, D.;
Littlewood, D. T. J.;
Pons, J.;
Vogler, A. P.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 21, p. i, doi. 10.1093/nar/gkq289
Publication type:: Article

A model in vitro system for co-transcriptional splicing.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7570

By:

Yu, Yong;
Das, Rita;
Folco, Eric G.;
Reed, Robin

Publication type:

Article

The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7378, doi. 10.1093/nar/gkq618

By:

Zhang, Xiaobai;
Cui, Juan;
Nilsson, Daniel;
Gunasekera, Kapila;
Chanfon, Astrid;
Song, Xiaofeng;
Wang, Huinan;
Xu, Ying;
Ochsenreiter, Torsten

Publication type:

Article

The phosphatase interactor NIPP1 regulates the occupancy of the histone methyltransferase EZH2 at Polycomb targets.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7500, doi. 10.1093/nar/gkq643

By:

Van Dessel, Nele;
Beke, Lijs;
Görnemann, Janina;
Minnebo, Nikki;
Beullens, Monique;
Tanuma, Nobuhiro;
Shima, Hiroshi;
Van Eynde, Aleyde;
Bollen, Mathieu

Publication type:

Article

By-passing in vitro screening—next generation sequencing technologies applied to antibody display and in silico candidate selection.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. e193, doi. 10.1093/nar/gkq789

By:

Ravn, U.;
Gueneau, F.;
Baerlocher, L.;
Osteras, M.;
Desmurs, M.;
Malinge, P.;
Magistrelli, G.;
Farinelli, L.;
Kosco-Vilbois, M.H.;
Fischer, N.

Publication type:

Article

How long is too long? Effects of loop size on G-quadruplex stability.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7858, doi. 10.1093/nar/gkq639

By:

Guédin, Aurore;
Gros, Julien;
Alberti, Patrizia;
Mergny, Jean-Louis

Publication type:

Article

Insights into the molecular determinants involved in cap recognition by the vaccinia virus D10 decapping enzyme.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7599, doi. 10.1093/nar/gkq628

By:

Soulière, Marie F.;
Perreault, Jean-Pierre;
Bisaillon, Martin

Publication type:

Article

The 68 kDa subunit of mammalian cleavage factor I interacts with the U7 small nuclear ribonucleoprotein and participates in 3′-end processing of animal histone mRNAs.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7637, doi. 10.1093/nar/gkq613

By:

Ruepp, Marc-David;
Vivarelli, Silvia;
Pillai, Ramesh S.;
Kleinschmidt, Nicole;
Azzouz, Teldja N.;
Barabino, Silvia M. L.;
Schümperli, Daniel

Publication type:

Article

Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7485, doi. 10.1093/nar/gkq652

By:

Ueki, Toshiyuki;
Lovley, Derek R.

Publication type:

Article

Cooperative translocation enhances the unwinding of duplex DNA by SARS coronavirus helicase nsP13.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7626, doi. 10.1093/nar/gkq647

By:

Lee, Na-Ra;
Kwon, Hyun-Mi;
Park, Kkothanahreum;
Oh, Sangtaek;
Jeong, Yong-Joo;
Kim, Dong-Eun

Publication type:

Article

NMR structure of the let-7 miRNA interacting with the site LCS1 of lin-41 mRNA from Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7814, doi. 10.1093/nar/gkq640

By:

Cevec, Mirko;
Thibaudeau, Christophe;
Plavec, Janez

Publication type:

Article

DNA compaction by the higher-order assembly of PRH/Hex homeodomain protein oligomers.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7513, doi. 10.1093/nar/gkq659

By:

Soufi, Abdenour;
Sawasdichai, Anyaporn;
Shukla, Anshuman;
Noy, Peter;
Dafforn, Tim;
Smith, Corinne;
Jayaraman, Padma-Sheela;
Gaston, Kevin

Publication type:

Article

Conformational plasticity of RNA for target recognition as revealed by the 2.15 Å crystal structure of a human IgG–aptamer complex.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7822, doi. 10.1093/nar/gkq615

By:

Nomura, Yusuke;
Sugiyama, Shigeru;
Sakamoto, Taiichi;
Miyakawa, Shin;
Adachi, Hiroaki;
Takano, Kazufumi;
Murakami, Satoshi;
Inoue, Tsuyoshi;
Mori, Yusuke;
Nakamura, Yoshikazu;
Matsumura, Hiroyoshi

Publication type:

Article

MuD: an interactive web server for the prediction of non-neutral substitutions using protein structural data.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7869, doi. 10.1093/nar/gkq1208

By:

Wainreb, Gilad;
Ashkenazy, Haim;
Bromberg, Yana;
Starovolsky-Shitrit, Alina;
Haliloglu, Turkan;
Ruppin, Eytan;
Avraham, Karen B.;
Rost, Burkhard;
Ben-Tal, Nir

Publication type:

Article

Functional analysis of the SRV-1 RNA frameshifting pseudoknot.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7665, doi. 10.1093/nar/gkq629

By:

Olsthoorn, René C. L.;
Reumerman, Richard;
Hilbers, Cornelis W.;
Pleij, Cornelis W. A.;
Heus, Hans A.

Publication type:

Article

The three-dimensional architecture of Hox cluster silencing.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7472, doi. 10.1093/nar/gkq644

By:

Ferraiuolo, Maria A.;
Rousseau, Mathieu;
Miyamoto, Carol;
Shenker, Solomon;
Wang, Xue Qing David;
Nadler, Michelle;
Blanchette, Mathieu;
Dostie, Josée

Publication type:

Article

Issues in bioinformatics benchmarking: the case study of multiple sequence alignment.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7353, doi. 10.1093/nar/gkq625

By:

Aniba, Mohamed Radhouene;
Poch, Olivier;
Thompson, Julie D.

Publication type:

Article

Error correction of next-generation sequencing data and reliable estimation of HIV quasispecies.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7400, doi. 10.1093/nar/gkq655

By:

Zagordi, Osvaldo;
Klein, Rolf;
Däumer, Martin;
Beerenwinkel, Niko

Publication type:

Article

Crystal structure of the P2 C-repressor: a binder of non-palindromic direct DNA repeats.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7778, doi. 10.1093/nar/gkq626

By:

Massad, Tariq;
Skaar, Karin;
Nilsson, Hanna;
Damberg, Peter;
Henriksson-Peltola, Petri;
Haggård-Ljungquist, Elisabeth;
Högbom, Martin;
Stenmark, Pål

Publication type:

Article

Involvement of argonaute proteins in gene silencing and activation by RNAs complementary to a non-coding transcript at the progesterone receptor promoter.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7736, doi. 10.1093/nar/gkq648

By:

Chu, Yongjun;
Yue, Xuan;
Younger, Scott T.;
Janowski, Bethany A.;
Corey, David R.

Publication type:

Article

Targeted rapid amplification of cDNA ends (T-RACE)—an improved RACE reaction through degradation of non-target sequences.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. e194, doi. 10.1093/nar/gkq816

By:

Bower, Neil I.;
Johnston, Ian A.

Publication type:

Article

Dynamics of a novel centromeric histone variant CenH3 reveals the evolutionary ancestral timing of centromere biogenesis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7526, doi. 10.1093/nar/gkq664

By:

Dubin, Manu;
Fuchs, Jörg;
Gräf, Ralph;
Schubert, Ingo;
Nellen, Wolfgang

Publication type:

Article

Deconstructing nucleotide binding activity of the Mdm2 RING domain.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7587, doi. 10.1093/nar/gkq669

By:

Priest, Christina;
Prives, Carol;
Poyurovsky, Masha V.

Publication type:

Article

Arrest of human mitochondrial RNA polymerase transcription by the biological aldehyde adduct of DNA, M1dG.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7546, doi. 10.1093/nar/gkq656

By:

Cline, Susan D.;
Lodeiro, M. Fernanda;
Marnett, Lawrence J.;
Cameron, Craig E.;
Arnold, Jamie J.

Publication type:

Article

A molecular clamp ensures allosteric coordination of peptidyltransfer and ligand binding to the ribosomal A-site.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7800, doi. 10.1093/nar/gkq641

By:

Meskauskas, Arturas;
Dinman, Jonathan D.

Publication type:

Article

Structure and function of the regulatory HRDC domain from human Bloom syndrome protein.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7764, doi. 10.1093/nar/gkq586

By:

Kim, Young Mee;
Choi, Byong-Seok

Publication type:

Article

A one-step method for quantitative determination of uracil in DNA by real-time PCR.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. e196

By:

Horváth, András;
Vértessy, Beáta G.

Publication type:

Article

CPEB2, CPEB3 and CPEB4 are coordinately regulated by miRNAs recognizing conserved binding sites in paralog positions of their 3′-UTRs.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7698, doi. 10.1093/nar/gkq635

By:

Morgan, Marcos;
Iaconcig, Alessandra;
Muro, Andrés Fernando

Publication type:

Article

Structural insights into the function of aminoglycoside-resistance A1408 16S rRNA methyltransferases from antibiotic-producing and human pathogenic bacteria.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7791, doi. 10.1093/nar/gkq627

By:

Macmaster, Rachel;
Zelinskaya, Natalia;
Savic, Miloje;
Rankin, C. Robert;
Conn, Graeme L.

Publication type:

Article

The terminal loop region controls microRNA processing by Drosha and Dicer.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7689, doi. 10.1093/nar/gkq645

By:

Zhang, Xiaoxiao;
Zeng, Yan

Publication type:

Article

GAM/ZFp/ZNF512B is central to a gene sensor circuitry involving cell-cycle regulators, TGFβ effectors, Drosha and microRNAs with opposite oncogenic potentials.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7673, doi. 10.1093/nar/gkq637

By:

Tili, Esmerina;
Michaille, Jean-Jacques;
Liu, Chang-Gong;
Alder, Hansjuerg;
Taccioli, Cristian;
Volinia, Stefano;
Calin, George A.;
Croce, Carlo M.

Publication type:

Article

A novel role of CPEB3 in regulating EGFR gene transcription via association with Stat5b in neurons.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7446, doi. 10.1093/nar/gkq634

By:

Peng, Shu-Chun;
Lai, Yen-Ting;
Huang, Hsi-Yuan;
Huang, Hsien-Da;
Huang, Yi-Shuian

Publication type:

Article

Single-stranded DNA catenation mediated by human EVL and a type I topoisomerase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7579, doi. 10.1093/nar/gkq630

By:

Takaku, Motoki;
Takahashi, Daisuke;
Machida, Shinichi;
Ueno, Hiroyuki;
Hosoya, Noriko;
Ikawa, Shukuko;
Miyagawa, Kiyoshi;
Shibata, Takehiko;
Kurumizaka, Hitoshi

Publication type:

Article

SIRT1 is regulated by a PPARγ–SIRT1 negative feedback loop associated with senescence.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7458, doi. 10.1093/nar/gkq609

By:

Han, Limin;
Zhou, Rui;
Niu, Jing;
McNutt, Michael A.;
Wang, Pan;
Tong, Tanjun

Publication type:

Article

HEXIM1 targets a repeated GAUC motif in the riboregulator of transcription 7SK and promotes base pair rearrangements.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7749, doi. 10.1093/nar/gkq660

By:

Lebars, Isabelle;
Martinez-Zapien, D.;
Durand, A.;
Coutant, J.;
Kieffer, B.;
Dock-Bregeon, Anne-Catherine

Publication type:

Article

A domain insertion in Escherichia coli GyrB adopts a novel fold that plays a critical role in gyrase function.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7830, doi. 10.1093/nar/gkq665

By:

Schoeffler, Allyn J.;
May, Andrew P.;
Berger, James M.

Publication type:

Article

Functional analysis of Thermus thermophilus transcription factor NusG.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7432, doi. 10.1093/nar/gkq623

By:

Sevostyanova, Anastasiya;
Artsimovitch, Irina

Publication type:

Article

Genomic repertoires of DNA-binding transcription factors across the tree of life.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7364, doi. 10.1093/nar/gkq617

By:

Charoensawan, Varodom;
Wilson, Derek;
Teichmann, Sarah A.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 21, p. iii, doi. 10.1093/nar/gkq1262
Publication type:: Article

Genomic analysis of codon, sequence and structural conservation with selective biochemical-structure mapping reveals highly conserved and dynamic structures in rotavirus RNAs with potential cis-acting functions.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7718, doi. 10.1093/nar/gkq663

By:

Li, Wilson;
Manktelow, Emily;
von Kirchbach, Johann C.;
Gog, Julia R.;
Desselberger, Ulrich;
Lever, Andrew M.

Publication type:

Article

Characterization and prediction of protein nucleolar localization sequences.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7388, doi. 10.1093/nar/gkq653

By:

Scott, Michelle S.;
Boisvert, François-Michel;
McDowall, Mark D.;
Lamond, Angus I.;
Barton, Geoffrey J.

Publication type:

Article

Using protein design algorithms to understand the molecular basis of disease caused by protein–DNA interactions: the Pax6 example.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 21, p. 7422, doi. 10.1093/nar/gkq683

By:

Alibés, Andreu;
Nadra, Alejandro D.;
De Masi, Federico;
Bulyk, Martha L.;
Serrano, Luis;
Stricher, François

Publication type:

Article