Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 20

Results: 54

DNA synapsis through transient tetramerization triggers cleavage by Ecl18kI restriction enzyme.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7142, doi. 10.1093/nar/gkq560

By:

Zaremba, Mindaugas;
Owsicka, Amelia;
Tamulaitis, Gintautas;
Sasnauskas, Giedrius;
Shlyakhtenko, Luda S.;
Lushnikov, Alexander Y.;
Lyubchenko, Yuri L.;
Laurens, Niels;
van den Broek, Bram;
Wuite, Gijs J. L.;
Siksnys, Virginijus

Publication type:

Article

Shielding effect of monovalent and divalent cations on solid-phase DNA hybridization: surface plasmon resonance biosensor study.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7343

By:

Špringer, Tomáš;
Šípová, Hana;
Vaisocherová, Hana;
Štěpánek, Josef;
Homola, Jiří

Publication type:

Article

Aromatic stacking between nucleobase and enzyme promotes phosphate ester hydrolysis in dUTPase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7179, doi. 10.1093/nar/gkq584

By:

Pecsi, Ildiko;
Leveles, Ibolya;
Harmat, Veronika;
Vertessy, Beata G.;
Toth, Judit

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 20, p. ii, doi. 10.1093/nar/gkq1193
Publication type:: Article

Export of microRNAs and microRNA-protective protein by mammalian cells.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7248, doi. 10.1093/nar/gkq601

By:

Wang, Kai;
Zhang, Shile;
Weber, Jessica;
Baxter, David;
Galas, David J.

Publication type:

Article

Reference-unbiased copy number variant analysis using CGH microarrays.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e190, doi. 10.1093/nar/gkq730

By:

Ju, Young Seok;
Hong, Dongwan;
Kim, Sheehyun;
Park, Sung-Soo;
Kim, Sujung;
Lee, Seungbok;
Park, Hansoo;
Kim, Jong-Il;
Seo, Jeong-Sun

Publication type:

Article

All-codon scanning identifies p53 cancer rescue mutations.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7079, doi. 10.1093/nar/gkq571

By:

Baronio, Roberta;
Danziger, Samuel A.;
Hall, Linda V.;
Salmon, Kirsty;
Hatfield, G. Wesley;
Lathrop, Richard H.;
Kaiser, Peter

Publication type:

Article

Predictive response-relevant clustering of expression data provides insights into disease processes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6831, doi. 10.1093/nar/gkq550

By:

Hopcroft, Lisa E. M.;
McBride, Martin W.;
Harris, Keith J.;
Sampson, Amanda K.;
McClure, John D.;
Graham, Delyth;
Young, Graham;
Holyoake, Tessa L.;
Girolami, Mark A.;
Dominiczak, Anna F.

Publication type:

Article

Pot1 inactivation leads to rampant telomere resection and loss in one cell cycle.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6968, doi. 10.1093/nar/gkq580

By:

Pitt, Christopher W.;
Cooper, Julia Promisel

Publication type:

Article

A novel host-specific restriction system associated with DNA backbone S-modification in Salmonella.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7133, doi. 10.1093/nar/gkq610

By:

Xu, Tiegang;
Yao, Fen;
Zhou, Xiufen;
Deng, Zixin;
You, Delin

Publication type:

Article

hnRNP Q and PTB modulate the circadian oscillation of mouse Rev-erb α via IRES-mediated translation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7068, doi. 10.1093/nar/gkq569

By:

Kim, Do-Yeon;
Woo, Kyung-Chul;
Lee, Kyung-Ha;
Kim, Tae-Don;
Kim, Kyong-Tai

Publication type:

Article

Blank peak current-suppressed electrochemical aptameric sensing platform for highly sensitive signal-on detection of small molecule.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e185, doi. 10.1093/nar/gkq728

By:

Zhang, Songbai;
Hu, Rong;
Hu, Peng;
Wu, Zai-Sheng;
Shen, Guo-Li;
Yu, Ru-Qin

Publication type:

Article

Small nucleolar RNA interference in Trypanosoma brucei: mechanism and utilization for elucidating the function of snoRNAs.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7236, doi. 10.1093/nar/gkq599

By:

Gupta, Sachin Kumar;
Hury, Avraham;
Ziporen, Yaara;
Shi, Huafang;
Ullu, Elisabetta;
Michaeli, Shulamit

Publication type:

Article

FragGeneScan: predicting genes in short and error-prone reads.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e191, doi. 10.1093/nar/gkq747

By:

Rho, Mina;
Tang, Haixu;
Ye, Yuzhen

Publication type:

Article

5′-UTR G-quadruplex structures acting as translational repressors.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7022, doi. 10.1093/nar/gkq557

By:

Beaudoin, Jean-Denis;
Perreault, Jean-Pierre

Publication type:

Article

CELF proteins regulate CFTR pre-mRNA splicing: essential role of the divergent domain of ETR-3.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7273, doi. 10.1093/nar/gkq573

By:

Dujardin, Gwendal;
Buratti, Emanuele;
Charlet-Berguerand, Nicolas;
Martins de Araujo, Mafalda;
Mbopda, Annick;
Le Jossic-Corcos, Catherine;
Pagani, Franco;
Ferec, Claude;
Corcos, Laurent

Publication type:

Article

Class-specific restrictions define primase interactions with DNA template and replicative helicase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7167, doi. 10.1093/nar/gkq588

By:

Larson, Marilynn A.;
Griep, Mark A.;
Bressani, Rafael;
Chintakayala, Kiran;
Soultanas, Panos;
Hinrichs, Steven H.

Publication type:

Article

BRG1 co-localizes with DNA replication factors and is required for efficient replication fork progression.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6906, doi. 10.1093/nar/gkq559

By:

Cohen, Stephanie M.;
Chastain, Paul D.;
Rosson, Gary B.;
Groh, Beezly S.;
Weissman, Bernard E.;
Kaufman, David G.;
Bultman, Scott J.

Publication type:

Article

Double-stranded DNA-templated cleavage of oligonucleotides containing a P3′→N5′ linkage triggered by triplex formation: the effects of chemical modifications and remarkable enhancement in reactivity.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7332, doi. 10.1093/nar/gkq600

By:

Ito, Kosuke Ramon;
Kodama, Tetsuya;
Tomizu, Masaharu;
Negoro, Yoshinori;
Orita, Ayako;
Osaki, Tomohisa;
Hosoki, Noritsugu;
Tanaka, Takaya;
Imanishi, Takeshi;
Obika, Satoshi

Publication type:

Article

A minicircuitry involving REST and CREB controls miR-9-2 expression during human neuronal differentiation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6895, doi. 10.1093/nar/gkq604

By:

Laneve, Pietro;
Gioia, Ubaldo;
Andriotto, Anastasia;
Moretti, Francesca;
Bozzoni, Irene;
Caffarelli, Elisa

Publication type:

Article

Facilitated leaky scanning and atypical ribosome shunting direct downstream translation initiation on the tricistronic S1 mRNA of avian reovirus.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7260, doi. 10.1093/nar/gkq611

By:

Racine, Trina;
Duncan, Roy

Publication type:

Article

Single-stranded DNA binding protein from human malarial parasite Plasmodium falciparum is encoded in the nucleus and targeted to the apicoplast.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7037, doi. 10.1093/nar/gkq565

By:

Prusty, Dhaneswar;
Dar, Ashraf;
Priya, Rashmi;
Sharma, Atul;
Dana, Srikanta;
Choudhury, Nirupam Roy;
Rao, N. Subba;
Dhar, Suman Kumar

Publication type:

Article

Cooperation between myogenic regulatory factors and SIX family transcription factors is important for myoblast differentiation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6857, doi. 10.1093/nar/gkq585

By:

Liu, Yubing;
Chu, Alphonse;
Chakroun, Imane;
Islam, Uzma;
Blais, Alexandre

Publication type:

Article

siRNAs from miRNA sites mediate DNA methylation of target genes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6883, doi. 10.1093/nar/gkq590

By:

Chellappan, Padmanabhan;
Xia, Jing;
Zhou, Xuefeng;
Gao, Shang;
Zhang, Xiaoming;
Coutino, Gabriela;
Vazquez, Franck;
Zhang, Weixiong;
Jin, Hailing

Publication type:

Article

A myriad of miRNA variants in control and Huntington’s disease brain regions detected by massively parallel sequencing.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7219

By:

Martí, Eulàlia;
Pantano, Lorena;
Bañez-Coronel, Mónica;
Llorens, Franc;
Miñones-Moyano, Elena;
Porta, Sílvia;
Sumoy, Lauro;
Ferrer, Isidre;
Estivill, Xavier

Publication type:

Article

A yeast one-hybrid system to screen for methylated DNA-binding proteins.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e189, doi. 10.1093/nar/gkq757

By:

Feng, Shu-Ying;
Ota, Kazuhisa;
Ito, Takashi

Publication type:

Article

Torsional sensing of small-molecule binding using magnetic tweezers.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7122, doi. 10.1093/nar/gkq598

By:

Lipfert, Jan;
Klijnhout, Sven;
Dekker, Nynke H.

Publication type:

Article

Short locked nucleic acid antisense oligonucleotides potently reduce apolipoprotein B mRNA and serum cholesterol in mice and non-human primates.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7100, doi. 10.1093/nar/gkq457

By:

Straarup, Ellen Marie;
Fisker, Niels;
Hedtjärn, Maj;
Lindholm, Marie W.;
Rosenbohm, Christoph;
Aarup, Vibeke;
Hansen, Henrik Frydenlund;
Ørum, Henrik;
Hansen, Jens B. Rode;
Koch, Troels

Publication type:

Article

Subtle gene modification in mouse ES cells: evidence for incorporation of unmodified oligonucleotides without induction of DNA damage.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6956, doi. 10.1093/nar/gkq589

By:

Aarts, Marieke;
te Riele, Hein

Publication type:

Article

BspRI restriction endonuclease: cloning, expression in Escherichia coli and sequential cleavage mechanism.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7155

By:

Raskó, Tamás;
Dér, András;
Klement, Éva;
Ślaska-Kiss, Krystyna;
Pósfai, Eszter;
Medzihradszky, Katalin F.;
Marshak, Daniel R.;
Roberts, Richard J.;
Kiss, Antal

Publication type:

Article

MicroRNA-181a modulates gene expression of zinc finger family members by directly targeting their coding regions.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7211, doi. 10.1093/nar/gkq564

By:

Huang, Shenglin;
Wu, Shunquan;
Ding, Jie;
Lin, Jun;
Wei, Lin;
Gu, Jianren;
He, Xianghuo

Publication type:

Article

A fast, efficient and sequence-independent method for flexible multiple segmental isotope labeling of RNA using ribozyme and RNase H cleavage.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e188, doi. 10.1093/nar/gkq756

By:

Duss, Olivier;
Maris, Christophe;
von Schroetter, Christine;
Allain, Frédéric H.-T.

Publication type:

Article

A G-quadruplex structure within the 5′-UTR of TRF2 mRNA represses translation in human cells.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7187, doi. 10.1093/nar/gkq563

By:

Gomez, Dennis;
Guédin, Aurore;
Mergny, Jean-Louis;
Salles, Bernard;
Riou, Jean-François;
Teulade-Fichou, Marie-Paule;
Calsou, Patrick

Publication type:

Article

Methyl CpG binding protein 2 (MeCP2) enhances photodimer formation at methyl-CpG sites but suppresses dimer deamination.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6943, doi. 10.1093/nar/gkq582

By:

Cannistraro, Vincent J.;
Taylor, John-Stephen A.

Publication type:

Article

Dissecting the expression patterns of transcription factors across conditions using an integrated network-based approach.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6841, doi. 10.1093/nar/gkq612

By:

Janga, Sarath Chandra;
Contreras-Moreira, Bruno

Publication type:

Article

In polycistronic Qβ RNA, single-strandedness at one ribosome binding site directly affects translational initiations at a distal upstream cistron.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7199, doi. 10.1093/nar/gkq541

By:

Jayant, Lalitha;
Priano, Christine;
Mills, Donald R.

Publication type:

Article

When simple sequence comparison fails: the cryptic case of the shared domains of the bacterial replication initiation proteins DnaB and DnaD.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6930, doi. 10.1093/nar/gkq465

By:

Marston, Farhat Y.;
Grainger, William H.;
Smits, Wiep Klaas;
Hopcroft, Nicholas H.;
Green, Matthew;
Hounslow, Andrea M.;
Grossman, Alan D.;
Craven, C. Jeremy;
Soultanas, Panos

Publication type:

Article

Targeted next-generation sequencing of DNA regions proximal to a conserved GXGXXG signaling motif enables systematic discovery of tyrosine kinase fusions in cancer.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6985, doi. 10.1093/nar/gkq579

By:

Chmielecki, Juliann;
Peifer, Martin;
Jia, Peilin;
Socci, Nicholas D.;
Hutchinson, Katherine;
Viale, Agnes;
Zhao, Zhongming;
Thomas, Roman K.;
Pao, William

Publication type:

Article

Capturing, sharing and analysing biophysical data from protein engineering and protein characterization studies.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. e186, doi. 10.1093/nar/gkq726

By:

Farrell, Damien;
O’Meara, Fergal;
Johnston, Michael;
Bradley, John;
Søndergaard, Chresten R.;
Georgi, Nikolaj;
Webb, Helen;
Tynan-Connolly, Barbara Mary;
Bjarnadottir, Una;
Carstensen, Tommy;
Nielsen, Jens Erik

Publication type:

Article

Repair of mitomycin C mono- and interstrand cross-linked DNA adducts by UvrABC: a new model.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6976, doi. 10.1093/nar/gkq576

By:

Weng, Mao-wen;
Zheng, Yi;
Jasti, Vijay P.;
Champeil, Elise;
Tomasz, Maria;
Wang, Yinsheng;
Basu, Ashis K.;
Tang, Moon-shong

Publication type:

Article

RecO-mediated DNA homology search and annealing is facilitated by SsbA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6920, doi. 10.1093/nar/gkq533

By:

Manfredi, Candela;
Suzuki, Yuki;
Yadav, Tribhuwan;
Takeyasu, Kunio;
Alonso, Juan C.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 20, p. iii, doi. 10.1093/nar/gkq1195
Publication type:: Article

Magnetic tweezers measurements of the nanomechanical properties of DNA in the presence of drugs.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7089, doi. 10.1093/nar/gkq597

By:

Salerno, Domenico;
Brogioli, Doriano;
Cassina, Valeria;
Turchi, Diana;
Beretta, Giovanni Luca;
Seruggia, Davide;
Ziano, Roberto;
Zunino, Franco;
Mantegazza, Francesco

Publication type:

Article

Long-range effects of histone point mutations on DNA remodeling revealed from computational analyses of SIN-mutant nucleosome structures.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6872

By:

Xu, Fei;
Colasanti, Andrew V.;
Li, Yun;
Olson, Wilma K.

Publication type:

Article

Intron RNA editing is essential for splicing in plant mitochondria.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7112, doi. 10.1093/nar/gkq591

By:

Castandet, Benoît;
Choury, David;
Bégu, Dominique;
Jordana, Xavier;
Araya, Alejandro

Publication type:

Article

Time-dependent increase in ribosome processivity.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7054, doi. 10.1093/nar/gkq566

By:

Bonderoff, Jennifer M.;
Lloyd, Richard E.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 20, p. i, doi. 10.1093/nar/gkq289
Publication type:: Article

Modulation of thermal stability can enhance the potency of siRNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7320, doi. 10.1093/nar/gkq568

By:

Addepalli, Haripriya;
Meena;
Peng, Chang G.;
Wang, Gang;
Fan, Yupeng;
Charisse, Klaus;
Jayaprakash, K. Narayanannair;
Rajeev, Kallanthottathil G.;
Pandey, Rajendra K.;
Lavine, Gary;
Zhang, Ligang;
Jahn-Hofmann, Kerstin;
Hadwiger, Philipp;
Manoharan, Muthiah;
Maier, Martin A.

Publication type:

Article

Structure of an archaeal non-discriminating glutamyl-tRNA synthetase: a missing link in the evolution of Gln-tRNAGln formation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 7286, doi. 10.1093/nar/gkq605

By:

Nureki, Osamu;
O’Donoghue, Patrick;
Watanabe, Nobuhisa;
Ohmori, Atsuhiko;
Oshikane, Hiroyuki;
Araiso, Yuhei;
Sheppard, Kelly;
Söll, Dieter;
Ishitani, Ryuichiro

Publication type:

Article

Segmental duplications in the human genome reveal details of pseudogene formation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 20, p. 6997, doi. 10.1093/nar/gkq587

By:

Khurana, Ekta;
Lam, Hugo Y. K.;
Cheng, Chao;
Carriero, Nicholas;
Cayting, Philip;
Gerstein, Mark B.

Publication type:

Article