Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 2

Results: 39

Interaction of Borrelia burgdorferi Hbb with the p66 promoter.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 414, doi. 10.1093/nar/gkp1027

By:

Medrano, Melisa S.;
Policastro, Paul F.;
Schwan, Tom G.;
Coburn, Jenifer

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 2, p. ii, doi. 10.1093/nar/gkq062
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 2, p. i, doi. 10.1093/nar/gkq289
Publication type:: Article

The scaRNA2 is produced by an independent transcription unit and its processing is directed by the encoding region.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 370, doi. 10.1093/nar/gkp988

By:

Gérard, Marie-Aline;
Myslinski, Evelyne;
Chylak, Natassia;
Baudrey, Stéphanie;
Krol, Alain;
Carbon, Philippe

Publication type:

Article

An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 522, doi. 10.1093/nar/gkp883

By:

Jex, Aaron R.;
Hall, Ross S.;
Littlewood, D. Timothy J.;
Gasser, Robin B.

Publication type:

Article

A homogeneous method for investigation of methylation-dependent protein–protein interactions in epigenetics.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e11, doi. 10.1093/nar/gkp899

By:

Quinn, Amy M.;
Bedford, Mark T.;
Espejo, Alexsandra;
Spannhoff, Astrid;
Austin, Christopher P.;
Oppermann, Udo;
Simeonov, Anton

Publication type:

Article

High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 683, doi. 10.1093/nar/gkp956

By:

Nozinovic, Senada;
Fürtig, Boris;
Jonker, Hendrik R. A.;
Richter, Christian;
Schwalbe, Harald

Publication type:

Article

MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 391, doi. 10.1093/nar/gkp992

By:

Serre, David;
Lee, Byron H.;
Ting, Angela H.

Publication type:

Article

Accurate recognition of cis-regulatory motifs with the correct lengths in prokaryotic genomes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e12, doi. 10.1093/nar/gkp907

By:

Li, Guojun;
Liu, Bingqiang;
Xu, Ying

Publication type:

Article

The crystal structure of Neisseria gonorrhoeae PriB reveals mechanistic differences among bacterial DNA replication restart pathways.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 499, doi. 10.1093/nar/gkp1031

By:

Dong, Jinlan;
George, Nicholas P.;
Duckett, Katrina L.;
DeBeer, Madeleine A. P.;
Lopper, Matthew E.

Publication type:

Article

The Mre11/Rad50/Nbs1 complex functions in resection-based DNA end joining in Xenopus laevis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 441, doi. 10.1093/nar/gkp905

By:

Taylor, Elaine M.;
Cecillon, Sophie M.;
Bonis, Antonio;
Chapman, J. Ross;
Povirk, Lawrence F.;
Lindsay, Howard D.

Publication type:

Article

Yeast cohesin complex embraces 2 micron plasmid sisters in a tri-linked catenane complex.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 570, doi. 10.1093/nar/gkp993

By:

Ghosh, Santanu K.;
Huang, Chu-Chun;
Hajra, Sujata;
Jayaram, Makkuni

Publication type:

Article

A capping-independent function of MePCE in stabilizing 7SK snRNA and facilitating the assembly of 7SK snRNP.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 360, doi. 10.1093/nar/gkp977

By:

Xue, Yuhua;
Yang, Zhiyuan;
Chen, Ruichuan;
Zhou, Qiang

Publication type:

Article

Origin-dependent initiation of DNA replication within telomeric sequences.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 467, doi. 10.1093/nar/gkp929

By:

Kurth, Isabel;
Gautier, Jean

Publication type:

Article

Two distinct regions in Staphylococcus aureus GatCAB guarantee accurate tRNA recognition.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 672, doi. 10.1093/nar/gkp955

By:

Nakamura, Akiyoshi;
Sheppard, Kelly;
Yamane, Junji;
Yao, Min;
Söll, Dieter;
Tanaka, Isao

Publication type:

Article

HIV-1 Vif binds to APOBEC3G mRNA and inhibits its translation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 633, doi. 10.1093/nar/gkp1009

By:

Mercenne, Gaëlle;
Bernacchi, Serena;
Richer, Delphine;
Bec, Guillaume;
Henriet, Simon;
Paillart, Jean-Christophe;
Marquet, Roland

Publication type:

Article

Divergent human remodeling complexes remove nucleosomes from strong positioning sequences.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 400, doi. 10.1093/nar/gkp1030

By:

Pham, Chuong D.;
He, Xi;
Schnitzler, Gavin R.

Publication type:

Article

Cohesin promotes the repair of ionizing radiation-induced DNA double-strand breaks in replicated chromatin.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 477, doi. 10.1093/nar/gkp976

By:

Bauerschmidt, Christina;
Arrichiello, Cecilia;
Burdak-Rothkamm, Susanne;
Woodcock, Michael;
Hill, Mark A.;
Stevens, David L.;
Rothkamm, Kai

Publication type:

Article

A novel SMC-like protein, SbcE (YhaN), is involved in DNA double-strand break repair and competence in Bacillus subtilis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 455, doi. 10.1093/nar/gkp909

By:

Krishnamurthy, Mahalakshmi;
Tadesse, Serkalem;
Rothmaier, Katharina;
Graumann, Peter L.

Publication type:

Article

Functional properties and evolutionary splicing constraints on a composite exonic regulatory element of splicing in CFTR exon 12.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 647, doi. 10.1093/nar/gkp1040

By:

Haque, Ariful;
Buratti, Emanuele;
Baralle, Francisco E.

Publication type:

Article

Probing the (H3-H4)2 histone tetramer structure using pulsed EPR spectroscopy combined with site-directed spin labelling.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 695, doi. 10.1093/nar/gkp1003

By:

Bowman, Andrew;
Ward, Richard;
El-Mkami, Hassane;
Owen-Hughes, Tom;
Norman, David G.

Publication type:

Article

Optimizing nucleotide sequence ensembles for combinatorial protein libraries using a genetic algorithm.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e10, doi. 10.1093/nar/gkp906

By:

Craig, Roger A.;
Lu, Jin;
Luo, Jinquan;
Shi, Lei;
Liao, Li

Publication type:

Article

Preferential access to genetic information from endogenous hominin ancient DNA and accurate quantitative SNP-typing via SPEX.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e7, doi. 10.1093/nar/gkp897

By:

Brotherton, Paul;
Sanchez, Juan J.;
Cooper, Alan;
Endicott, Phillip

Publication type:

Article

A profusion of upstream open reading frame mechanisms in polyamine-responsive translational regulation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 353, doi. 10.1093/nar/gkp1037

By:

Ivanov, Ivaylo P.;
Atkins, John F.;
Michael, Antony J.

Publication type:

Article

The 5′-untranslated region of the mouse mammary tumor virus mRNA exhibits cap-independent translation initiation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 618, doi. 10.1093/nar/gkp890

By:

Vallejos, Maricarmen;
Ramdohr, Pablo;
Valiente-Echeverría, Fernando;
Tapia, Karla;
Rodriguez, Felipe E.;
Lowy, Fernando;
Huidobro-Toro, J. Pablo;
Dangerfield, John A.;
López-Lastra, Marcelo

Publication type:

Article

Measurement of replication structures at the nanometer scale using super-resolution light microscopy.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e8, doi. 10.1093/nar/gkp901

By:

Baddeley, D.;
Chagin, V. O.;
Schermelleh, L.;
Martin, S.;
Pombo, A.;
Carlton, P. M.;
Gahl, A.;
Domaing, P.;
Birk, U.;
Leonhardt, H.;
Cremer, C.;
Cardoso, M. C.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 2, p. iii, doi. 10.1093/nar/gkq063
Publication type:: Article

The tumor suppressor, parafibromin, mediates histone H3 K9 methylation for cyclin D1 repression.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 382, doi. 10.1093/nar/gkp991

By:

Yang, Yong-Jin;
Han, Jeung-Whan;
Youn, Hong-Duk;
Cho, Eun-Jung

Publication type:

Article

Integrative analysis of the human cis-antisense gene pairs, miRNAs and their transcription regulation patterns.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 534, doi. 10.1093/nar/gkp954

By:

Grinchuk, Oleg V.;
Jenjaroenpun, Piroon;
Orlov, Yuriy L.;
Zhou, Jiangtao;
Kuznetsov, Vladimir A.

Publication type:

Article

The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 559, doi. 10.1093/nar/gkp990

By:

Frumerie, Clara;
Ducos-Galand, Magaly;
Gopaul, Deshmukh N.;
Mazel, Didier

Publication type:

Article

Random DNA fragmentation allows detection of single-copy, single-exon alterations of copy number by oligonucleotide array CGH in clinical FFPE samples.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. e9, doi. 10.1093/nar/gkp881

By:

Hostetter, Galen;
Kim, Su Young;
Savage, Stephanie;
Gooden, Gerald C.;
Barrett, Michael;
Zhang, Jian;
Alla, Lalitamba;
Watanabe, April;
Einspahr, Janine;
Prasad, Anil;
Nickoloff, Brian J.;
Carpten, John;
Trent, Jeffrey;
Alberts, David;
Bittner, Michael

Publication type:

Article

GTP-dependent structural rearrangement of the eRF1:eRF3 complex and eRF3 sequence motifs essential for PABP binding.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 548, doi. 10.1093/nar/gkp908

By:

Kononenko, Artem V.;
Mitkevich, Vladimir A.;
Atkinson, Gemma C.;
Tenson, Tanel;
Dubovaya, Vera I.;
Frolova, Ludmila Yu;
Makarov, Alexander A.;
Hauryliuk, Vasili

Publication type:

Article

Molecular mechanisms of RNA polymerase—the F/E (RPB4/7) complex is required for high processivity in vitro.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 585, doi. 10.1093/nar/gkp928

By:

Hirtreiter, Angela;
Grohmann, Dina;
Werner, Finn

Publication type:

Article

Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5′-GTgG-3′ sequence: destabilization of two base pairs at the lesion site.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 428, doi. 10.1093/nar/gkp844

By:

Brown, Kyle L.;
Roginskaya, Marina;
Zou, Yue;
Altamirano, Alvin;
Basu, Ashis K.;
Stone, Michael P.

Publication type:

Article

Analysis of acyclic nucleoside modifications in siRNAs finds sensitivity at position 1 that is restored by 5′-terminal phosphorylation both in vitro and in vivo.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 660, doi. 10.1093/nar/gkp913

By:

Kenski, Denise M.;
Cooper, Abby J.;
Li, Jenny J.;
Willingham, Aarron T.;
Haringsma, Henry J.;
Young, Tracy A.;
Kuklin, Nelly A.;
Jones, Jeffrey J.;
Cancilla, Mark T.;
McMasters, Daniel R.;
Mathur, Melina;
Sachs, Alan B.;
Flanagan, W. Michael

Publication type:

Article

A global view of the nonprotein-coding transcriptome in Plasmodium falciparum.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 608, doi. 10.1093/nar/gkp895

By:

Raabe, Carsten A.;
Sanchez, Cecilia P.;
Randau, Gerrit;
Robeck, Thomas;
Skryabin, Boris V.;
Chinni, Suresh V.;
Kube, Michael;
Reinhardt, Richard;
Ng, Guey Hooi;
Manickam, Ravichandran;
Kuryshev, Vladimir Y.;
Lanzer, Michael;
Brosius, Juergen;
Tang, Thean Hock;
Rozhdestvensky, Timofey S.

Publication type:

Article

Processing of the Escherichia coli leuX tRNA transcript, encoding tRNALeu5, requires either the 3′→5′ exoribonuclease polynucleotide phosphorylase or RNase P to remove the Rho-independent transcription terminator.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 597, doi. 10.1093/nar/gkp997

By:

Mohanty, Bijoy K.;
Kushner, Sidney R.

Publication type:

Article

Sumoylation of the BLM ortholog, Sgs1, promotes telomere–telomere recombination in budding yeast.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 488, doi. 10.1093/nar/gkp1008

By:

Lu, Chia-Yin;
Tsai, Cheng-Hui;
Brill, Steven J.;
Teng, Shu-Chun

Publication type:

Article

Independent mechanisms of stimulation of polynucleotide kinase/phosphatase by phosphorylated and non-phosphorylated XRCC1.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 2, p. 510

By:

Lu, Meiling;
Mani, Rajam S.;
Karimi-Busheri, Feridoun;
Fanta, Mesfin;
Wang, Hailin;
Litchfeld, David W.;
Weinfeld, Michael

Publication type:

Article