Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 18

Results: 38

Tiny abortive initiation transcripts exert antitermination activity on an RNA hairpin-dependent intrinsic terminator.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6045, doi. 10.1093/nar/gkq450

By:

Lee, Sooncheol;
Nguyen, Huong Minh;
Kang, Changwon

Publication type:

Article

Molecular dynamics simulations suggest that RNA three-way junctions can act as flexible RNA structural elements in the ribosome.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6247

By:

Beššeová, Ivana;
Réblová, Kamila;
Leontis, Neocles B.;
Šponer, Jiří

Publication type:

Article

Runx1 binds as a dimeric complex to overlapping Runx1 sites within a palindromic element in the human GM-CSF enhancer.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6124, doi. 10.1093/nar/gkq356

By:

Bowers, Sarion R.;
Calero-Nieto, Fernando J.;
Valeaux, Stephanie;
Fernandez-Fuentes, Narcis;
Cockerill, Peter N.

Publication type:

Article

70% efficiency of bistate molecular machines explained by information theory, high dimensional geometry and evolutionary convergence.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 5995, doi. 10.1093/nar/gkq389

By:

Schneider, Thomas D.

Publication type:

Article

RNAMotifScan: automatic identification of RNA structural motifs using secondary structural alignment.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e176, doi. 10.1093/nar/gkq672

By:

Zhong, Cuncong;
Tang, Haixu;
Zhang, Shaojie

Publication type:

Article

The Saccharomyces cerevisiae Mcm6/2 and Mcm5/3 ATPase active sites contribute to the function of the putative Mcm2-7 ‘gate’.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6078, doi. 10.1093/nar/gkq422

By:

Bochman, Matthew L.;
Schwacha, Anthony

Publication type:

Article

Structure of the K-turn U4 RNA: a combined NMR and SANS study.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6274, doi. 10.1093/nar/gkq380

By:

Falb, Melanie;
Amata, Irene;
Gabel, Frank;
Simon, Bernd;
Carlomagno, Teresa

Publication type:

Article

Insights into the hyperthermostability and unusual region-specificity of archaeal Pyrococcus abyssi tRNA m1A57/58 methyltransferase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6206, doi. 10.1093/nar/gkq381

By:

Guelorget, Amandine;
Roovers, Martine;
Guérineau, Vincent;
Barbey, Carole;
Li, Xuan;
Golinelli-Pimpaneau, Béatrice

Publication type:

Article

Stoichiometric incorporation of base substitutions at specific sites in supercoiled DNA and supercoiled recombination intermediates.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e175, doi. 10.1093/nar/gkq674

By:

Matovina, Mihaela;
Seah, Nicole;
Hamilton, Theron;
Warren, David;
Landy, Arthur

Publication type:

Article

Origin and quantification of circulating DNA in mice with human colorectal cancer xenografts.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6159, doi. 10.1093/nar/gkq421

By:

Thierry, Alain R.;
Mouliere, Florent;
Gongora, Celine;
Ollier, Jeremy;
Robert, Bruno;
Ychou, Marc;
Del Rio, Maguy;
Molina, Franck

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 18, p. i, doi. 10.1093/nar/gkq289
Publication type:: Article

The alternative end-joining pathway for repair of DNA double-strand breaks requires PARP1 but is not dependent upon microhomologies.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6065, doi. 10.1093/nar/gkq387

By:

Mansour, Wael Y.;
Rhein, Tim;
Dahm-Daphi, Jochen

Publication type:

Article

Extensive frameshift at all AGG and CCC codons in the mitochondrial cytochrome c oxidase subunit 1 gene of Perkinsus marinus (Alveolata; Dinoflagellata).

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6186, doi. 10.1093/nar/gkq449

By:

Masuda, Isao;
Matsuzaki, Motomichi;
Kita, Kiyoshi

Publication type:

Article

Protein evolution in yeast transcription factor subnetworks.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 5959, doi. 10.1093/nar/gkq353

By:

Wang, Yong;
Franzosa, Eric A.;
Zhang, Xiang-Sun;
Xia, Yu

Publication type:

Article

Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e177, doi. 10.1093/nar/gkq673

By:

Das, Somes K.;
Austin, Michael D.;
Akana, Matthew C.;
Deshpande, Paru;
Cao, Han;
Xiao, Ming

Publication type:

Article

High-resolution profiling of the LEDGF/p75 chromatin interaction in the ENCODE region.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6135, doi. 10.1093/nar/gkq410

By:

De Rijck, Jan;
Bartholomeeusen, Koen;
Ceulemans, Hugo;
Debyser, Zeger;
Gijsbers, Rik

Publication type:

Article

Role of the amino terminal RHAU-specific motif in the recognition and resolution of guanine quadruplex-RNA by the DEAH-box RNA helicase RHAU.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6219, doi. 10.1093/nar/gkq372

By:

Lattmann, Simon;
Giri, Banabihari;
Vaughn, James P.;
Akman, Steven A.;
Nagamine, Yoshikuni

Publication type:

Article

Modulation of HU–DNA interactions by salt concentration and applied force.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6176, doi. 10.1093/nar/gkq435

By:

Xiao, Botao;
Johnson, Reid C.;
Marko, John F.

Publication type:

Article

Functional characterization of the YmcB and YqeV tRNA methylthiotransferases of Bacillus subtilis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6195, doi. 10.1093/nar/gkq364

By:

Anton, Brian P.;
Russell, Susan P.;
Vertrees, Jason;
Kasif, Simon;
Raleigh, Elisabeth A.;
Limbach, Patrick A.;
Roberts, Richard J.

Publication type:

Article

Discovery of microRNAs and other small RNAs in solid tumors.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6234, doi. 10.1093/nar/gkq376

By:

Meiri, Eti;
Levy, Asaf;
Benjamin, Hila;
Ben-David, Miriam;
Cohen, Lahav;
Dov, Avital;
Dromi, Nir;
Elyakim, Eran;
Yerushalmi, Noga;
Zion, Orit;
Lithwick-Yanai, Gila;
Sitbon, Einat

Publication type:

Article

The dimerization domain of SOX9 is required for transcription activation of a chondrocyte-specific chromatin DNA template.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6018, doi. 10.1093/nar/gkq417

By:

Coustry, Françoise;
Oh, Chun-do;
Hattori, Takako;
Maity, Sankar N.;
de Crombrugghe, Benoit;
Yasuda, Hideyo

Publication type:

Article

MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e178, doi. 10.1093/nar/gkq622

By:

Wang, Kai;
Singh, Darshan;
Zeng, Zheng;
Coleman, Stephen J.;
Huang, Yan;
Savich, Gleb L.;
He, Xiaping;
Mieczkowski, Piotr;
Grimm, Sara A.;
Perou, Charles M.;
MacLeod, James N.;
Chiang, Derek Y.;
Prins, Jan F.;
Liu, Jinze

Publication type:

Article

Strain-specific genes of Helicobacter pylori: genome evolution driven by a novel type IV secretion system and genomic island transfer.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6089, doi. 10.1093/nar/gkq378

By:

Fischer, Wolfgang;
Windhager, Lukas;
Rohrer, Stefanie;
Zeiller, Matthias;
Karnholz, Arno;
Hoffmann, Reinhard;
Zimmer, Ralf;
Haas, Rainer

Publication type:

Article

Slingshot: a PiggyBac based transposon system for tamoxifen-inducible ‘self-inactivating’ insertional mutagenesis.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e173, doi. 10.1093/nar/gkq658

By:

Kong, Jun;
Wang, Feng;
Brenton, James D.;
Adams, David J.

Publication type:

Article

Perturbations in nucleosome structure from heavy metal association.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6301, doi. 10.1093/nar/gkq420

By:

Mohideen, Kareem;
Muhammad, Reyhan;
Davey, Curt A.

Publication type:

Article

A single amino acid substitution confers enhanced methylation activity of mammalian Dnmt3b on chromatin DNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6054, doi. 10.1093/nar/gkq456

By:

Shen, Li;
Gao, Ge;
Zhang, Ying;
Zhang, He;
Ye, Zhiqiang;
Huang, Shichao;
Huang, Jinyan;
Kang, Jiuhong

Publication type:

Article

Comparative genomics of cyclic-di-GMP signalling in bacteria: post-translational regulation and catalytic activity.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 5970, doi. 10.1093/nar/gkq382

By:

Seshasayee, Aswin S.N.;
Fraser, Gillian M.;
Luscombe, Nicholas M.

Publication type:

Article

Novel multi-nucleotide polymorphisms in the human genome characterized by whole genome and exome sequencing.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6102, doi. 10.1093/nar/gkq408

By:

Rosenfeld, Jeffrey A.;
Malhotra, Anil K.;
Lencz, Todd

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 18, p. ii, doi. 10.1093/nar/gkq1010
Publication type:: Article

An engineered mammalian band-pass network.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. e174, doi. 10.1093/nar/gkq671

By:

Greber, David;
Fussenegger, Martin

Publication type:

Article

Identification of a consensus element recognized and cleaved by IRE1α.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6265, doi. 10.1093/nar/gkq452

By:

Oikawa, Daisuke;
Tokuda, Mio;
Hosoda, Akira;
Iwawaki, Takao

Publication type:

Article

Structural signatures of antibiotic binding sites on the ribosome.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 5982, doi. 10.1093/nar/gkq411

By:

David-Eden, Hilda;
Mankin, Alexander S.;
Mandel-Gutfreund, Yael

Publication type:

Article

Genome-wide interrogation of hepatic FXR reveals an asymmetric IR-1 motif and synergy with LRH-1.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6007, doi. 10.1093/nar/gkq397

By:

Chong, Hansook Kim;
Infante, Aniello M.;
Seo, Young-Kyo;
Jeon, Tae-Il;
Zhang, Yanqiao;
Edwards, Peter A.;
Xie, Xiaohui;
Osborne, Timothy F.

Publication type:

Article

HLJ1 is a novel caspase-3 substrate and its expression enhances UV-induced apoptosis in non-small cell lung carcinoma.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6148, doi. 10.1093/nar/gkq412

By:

Lin, Sheng-Yi;
Hsueh, Chi-Mei;
Yu, Sung-Liang;
Su, Chih-Chung;
Shum, Weng-Yoon;
Yeh, Kuan-Chuan;
Chang, Gee-Chen;
Chen, Jeremy J. W.

Publication type:

Article

Specification of the NF-κB transcriptional response by p65 phosphorylation and TNF-induced nuclear translocation of IKKɛ.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6029, doi. 10.1093/nar/gkq439

By:

Moreno, Rita;
Sobotzik, Jürgen-Markus;
Schultz, Christian;
Schmitz, M. Lienhard

Publication type:

Article

Functional analysis and identification of cis-regulatory elements of human chromosome 21 gene promoters.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6112, doi. 10.1093/nar/gkq402

By:

Warnatz, Hans-Jörg;
Querfurth, Robert;
Guerasimova, Anna;
Cheng, Xi;
Haas, Stefan A.;
Hufton, Andrew L.;
Manke, Thomas;
Vanhecke, Dominique;
Nietfeld, Wilfried;
Vingron, Martin;
Janitz, Michal;
Lehrach, Hans;
Yaspo, Marie-Laure

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 18, p. iii, doi. 10.1093/nar/gkq1012
Publication type:: Article

The protein–DNA contacts in RutR·carAB operator complexes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 18, p. 6286, doi. 10.1093/nar/gkq385

By:

Nguyen Le Minh, Phu;
Bervoets, Indra;
Maes, Dominique;
Charlier, Daniel

Publication type:

Article