Works matching IS 03051048 AND DT 2010 AND VI 38 AND IP 1

Results: 37

The Gene Ontology in 2010: extensions and refinements.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. D331, doi. 10.1093/nar/gkp1018

By:

The Gene Ontology Consortium

Publication type:

Article

Sequence context outside the target region influences the effectiveness of miR-223 target sites in the RhoB 3′UTR.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 239, doi. 10.1093/nar/gkp870

By:

Sun, Guihua;
Li, Haitang;
Rossi, John J.

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 1, p. iii, doi. 10.1093/nar/gkp1233
Publication type:: Article

Sequence-non-specific effects of RNA interference triggers and microRNA regulators.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 1, doi. 10.1093/nar/gkp829

By:

Olejniczak, Marta;
Galka, Paulina;
Krzyzosiak, Wlodzimierz J.

Publication type:

Article

The neurofibromatosis type I pre-mRNA is a novel target of CELF protein-mediated splicing regulation.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 253, doi. 10.1093/nar/gkp766

By:

Barron, Victoria A.;
Zhu, Hui;
Hinman, Melissa N.;
Ladd, Andrea N.;
Lou, Hua

Publication type:

Article

Comparing effects of mTR and mTERT deletion on gene expression and DNA damage response: a critical examination of telomere length maintenance-independent roles of telomerase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 60, doi. 10.1093/nar/gkp855

By:

Vidal-Cardenas, Sofia L.;
Greider, Carol W.

Publication type:

Article

Telomeric circles are abundant in the stn1-M1 mutant that maintains its telomeres through recombination.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 182, doi. 10.1093/nar/gkp814

By:

Basenko, Evelina Y.;
Cesare, Anthony J.;
Iyer, Shilpa;
Griffith, Jack D.;
McEachern, Michael J.

Publication type:

Article

Mesenchymal stem cell secretes microparticles enriched in pre-microRNAs.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 215, doi. 10.1093/nar/gkp857

By:

Chen, Tian Sheng;
Lai, Ruenn Chai;
Lee, May May;
Choo, Andre Boon Hwa;
Lee, Chuen Neng;
Lim, Sai Kiang

Publication type:

Article

A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 299, doi. 10.1093/nar/gkp834

By:

Lavery, Richard;
Zakrzewska, Krystyna;
Beveridge, David;
Bishop, Thomas C.;
Case, David A.;
Cheatham, Thomas;
Dixit, Surjit;
Jayaram, B.;
Lankas, Filip;
Laughton, Charles;
Maddocks, John H.;
Michon, Alexis;
Osman, Roman;
Orozco, Modesto;
Perez, Alberto;
Singh, Tanya;
Spackova, Nada;
Sponer, Jiri

Publication type:

Article

Novel recognition motifs and biological functions of the RNA-binding protein HuD revealed by genome-wide identification of its targets.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 117, doi. 10.1093/nar/gkp863

By:

Bolognani, Federico;
Contente-Cuomo, Tania;
Perrone-Bizzozero, Nora I.

Publication type:

Article

Martini: using literature keywords to compare gene sets.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 26, doi. 10.1093/nar/gkp876

By:

Soldatos, Theodoros G.;
O’Donoghue, Seán I.;
Satagopam, Venkata P.;
Jensen, Lars J.;
Brown, Nigel P.;
Barbosa-Silva, Adriano;
Schneider, Reinhard

Publication type:

Article

CpG_MI: a novel approach for identifying functional CpG islands in mammalian genomes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e6, doi. 10.1093/nar/gkp882

By:

Su, Jianzhong;
Zhang, Yan;
Lv, Jie;
Liu, Hongbo;
Tang, Xiaoyan;
Wang, Fang;
Qi, Yunfeng;
Feng, Yujia;
Li, Xia

Publication type:

Article

Modeling tissue-specific structural patterns in human and mouse promoters.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 17, doi. 10.1093/nar/gkp866

By:

Vandenbon, Alexis;
Nakai, Kenta

Publication type:

Article

NF90 selectively represses the translation of target mRNAs bearing an AU-rich signature motif.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 225, doi. 10.1093/nar/gkp861

By:

Kuwano, Yuki;
Pullmann, Rudolf;
Marasa, Bernard S.;
Abdelmohsen, Kotb;
Lee, Eun Kyung;
Yang, Xiaoling;
Martindale, Jennifer L.;
Zhan, Ming;
Gorospe, Myriam

Publication type:

Article

Two modules in the BRC repeats of BRCA2 mediate structural and functional interactions with the RAD51 recombinase.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 82, doi. 10.1093/nar/gkp873

By:

Rajendra, Eeson;
Venkitaraman, Ashok R.

Publication type:

Article

Fine tuning of the E. coli NusB:NusE complex affinity to BoxA RNA is required for processive antitermination.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 314, doi. 10.1093/nar/gkp736

By:

Burmann, Björn M.;
Luo, Xiao;
Rösch, Paul;
Wahl, Markus C.;
Gottesman, Max E.

Publication type:

Article

Efficient gene silencing by delivery of locked nucleic acid antisense oligonucleotides, unassisted by transfection reagents.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e3, doi. 10.1093/nar/gkp841

By:

Stein, C. A.;
Hansen, J. Bo;
Lai, Johnathan;
Wu, SiJian;
Voskresenskiy, Anatoliy;
Høg, Anja;
Worm, Jesper;
Hedtjärn, Maj;
Souleimanian, Naira;
Miller, Paul;
Soifer, Harris S.;
Castanotto, Daniella;
Benimetskaya, Luba;
Ørum, Henrik;
Koch, Troels

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 1, p. i, doi. 10.1093/nar/gkp1232
Publication type:: Article

Drosophila mini-white model system: new insights into positive position effects and the role of transcriptional terminators and gypsy insulator in transgene shielding.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 39, doi. 10.1093/nar/gkp877

By:

Silicheva, Margarita;
Golovnin, Anton;
Pomerantseva, Ekaterina;
Parshikov, Aleksander;
Georgiev, Pavel;
Maksimenko, Oksana

Publication type:

Article

DNA topoisomerase I inhibition by camptothecin induces escape of RNA polymerase II from promoter-proximal pause site, antisense transcription and histone acetylation at the human HIF-1α gene locus.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 159, doi. 10.1093/nar/gkp817

By:

Baranello, Laura;
Bertozzi, Davide;
Fogli, Maria Vittoria;
Pommier, Yves;
Capranico, Giovanni

Publication type:

Article

The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 203, doi. 10.1093/nar/gkp904

By:

te Velthuis, Aartjan J. W.;
Arnold, Jamie J.;
Cameron, Craig E.;
van den Worm, Sjoerd H. E.;
Snijder, Eric J.

Publication type:

Article

MMBGX: a method for estimating expression at the isoform level and detecting differential splicing using whole-transcript Affymetrix arrays.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e4, doi. 10.1093/nar/gkp853

By:

Turro, Ernest;
Lewin, Alex;
Rose, Anna;
Dallman, Margaret J.;
Richardson, Sylvia

Publication type:

Article

Energetic signatures of single base bulges: thermodynamic consequences and biological implications.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 97, doi. 10.1093/nar/gkp1036

By:

Minetti, Conceição A. S. A.;
Remeta, David P.;
Dickstein, Rian;
Breslauer, Kenneth J.

Publication type:

Article

Understanding how the crowded interior of cells stabilizes DNA/DNA and DNA/RNA hybrids–in silico predictions and in vitro evidence.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 172, doi. 10.1093/nar/gkp884

By:

Harve, Karthik S.;
Lareu, Ricky;
Rajagopalan, Raj;
Raghunath, Michael

Publication type:

Article

Transposition of the human Hsmar1 transposon: rate-limiting steps and the importance of the flanking TA dinucleotide in second strand cleavage.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 190, doi. 10.1093/nar/gkp891

By:

Claeys Bouuaert, Corentin;
Chalmers, Ronald

Publication type:

Article

Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 265, doi. 10.1093/nar/gkp869

By:

Raczynska, Katarzyna Dorota;
Simpson, Craig G.;
Ciesiolka, Adam;
Szewc, Lukasz;
Lewandowska, Dominika;
McNicol, Jim;
Szweykowska-Kulinska, Zofia;
Brown, John W. S.;
Jarmolowski, Artur

Publication type:

Article

FtsK translocation on DNA stops at XerCD-dif.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 72, doi. 10.1093/nar/gkp843

By:

Graham, James E.;
Sivanathan, Viknesh;
Sherratt, David J.;
Arciszewska, Lidia K.

Publication type:

Article

Comparative analyses of time-course gene expression profiles of the long-lived sch9Δ mutant.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 143, doi. 10.1093/nar/gkp849

By:

Ge, Huanying;
Wei, Min;
Fabrizio, Paola;
Hu, Jia;
Cheng, Chao;
Longo, Valter D.;
Li, Lei M.

Publication type:

Article

Maximization of negative correlations in time-course gene expression data for enhancing understanding of molecular pathways.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e1, doi. 10.1093/nar/gkp822

By:

Zeng, Tao;
Li, Jinyan

Publication type:

Article

Expression of stress-response ATF3 is mediated by Nrf2 in astrocytes.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 48, doi. 10.1093/nar/gkp865

By:

Kim, Kyu-Han;
Jeong, Jae-Yeon;
Surh, Young-Joon;
Kim, Kyu-Won

Publication type:

Article

‘RNA walk’ a novel approach to study RNA–RNA interactions between a small RNA and its target.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e5, doi. 10.1093/nar/gkp872

By:

Lustig, Yaniv;
Wachtel, Chaim;
Safro, Mark;
Liu, Li;
Michaeli, Shulamit

Publication type:

Article

Molecular crowding creates an essential environment for the formation of stable G-quadruplexes in long double-stranded DNA.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 327, doi. 10.1093/nar/gkp898

By:

Zheng, Ke-wei;
Chen, Zhao;
Hao, Yu-hua;
Tan, Zheng

Publication type:

Article

Profiling the selectivity of DNA ligases in an array format with mass spectrometry.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. e2, doi. 10.1093/nar/gkp827

By:

Kim, Joohoon;
Mrksich, Milan

Publication type:

Article

Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 279, doi. 10.1093/nar/gkp903

By:

Szczesny, Roman J.;
Borowski, Lukasz S.;
Brzezniak, Lien K.;
Dmochowska, Aleksandra;
Gewartowski, Kamil;
Bartnik, Ewa;
Stepien, Piotr P.

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2010, v. 38, n. 1, p. ii, doi. 10.1093/nar/gkp1231
Publication type:: Article

DNA adducts of aristolochic acid II: total synthesis and site-specific mutagenesis studies in mammalian cells.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 339, doi. 10.1093/nar/gkp815

By:

Attaluri, Sivaprasad;
Bonala, Radha R.;
Yang, In-Young;
Lukin, Mark A.;
Wen, Yujing;
Grollman, Arthur P.;
Moriya, Masaaki;
Iden, Charles R.;
Johnson, Francis

Publication type:

Article

Single-cell transcriptional analysis of taste sensory neuron pair in Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2010, v. 38, n. 1, p. 131, doi. 10.1093/nar/gkp868

By:

Takayama, Jun;
Faumont, Serge;
Kunitomo, Hirofumi;
Lockery, Shawn R.;
Iino, Yuichi

Publication type:

Article