Works matching IS 03051048 AND DT 2009 AND VI 37 AND IP 16

Results: 38

Qri7/OSGEPL, the mitochondrial version of the universal Kae1/YgjD protein, is essential for mitochondrial genome maintenance.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5343, doi. 10.1093/nar/gkp557

By:

Oberto, Jacques;
Breuil, Norman;
Hecker, Arnaud;
Farina, Francesca;
Brochier-Armanet, Céline;
Culetto, Emmanuel;
Forterre, Patrick

Publication type:

Article

Analysis of individual remodeled nucleosomes reveals decreased histone–DNA contacts created by hSWI/SNF.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5279, doi. 10.1093/nar/gkp524

By:

Bouazoune, Karim;
Miranda, Tina B.;
Jones, Peter A.;
Kingston, Robert E.

Publication type:

Article

Detection of genomic islands via segmental genome heterogeneity.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5255, doi. 10.1093/nar/gkp576

By:

Arvey, Aaron J.;
Azad, Rajeev K.;
Raval, Alpan;
Lawrence, Jeffrey G.

Publication type:

Article

Differential requirement of a distal regulatory region for pre-initiation complex formation at globin gene promoters.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5295, doi. 10.1093/nar/gkp545

By:

Ross, Julie;
Bottardi, Stefania;
Bourgoin, Vincent;
Wollenschlaeger, Alex;
Drobetsky, Elliot;
Trudel, Marie;
Milot, Eric

Publication type:

Article

Characterization of homologs of the small RNA SgrS reveals diversity in function.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5477, doi. 10.1093/nar/gkp591

By:

Wadler, Caryn S.;
Vanderpool, Carin K.

Publication type:

Article

Dissecting protein-induced DNA looping dynamics in real time.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5454, doi. 10.1093/nar/gkp570

By:

Laurens, Niels;
Bellamy, Stuart R. W.;
Harms, August F.;
Kovacheva, Yana S.;
Halford, Stephen E.;
Wuite, Gijs J. L.

Publication type:

Article

LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5529, doi. 10.1093/nar/gkp572

By:

Luhtala, Natalie;
Parker, Roy

Publication type:

Article

Chemical synthesis, DNA incorporation and biological study of a new photocleavable 2′-deoxyadenosine mimic.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5237, doi. 10.1093/nar/gkp562

By:

Berthet, Nathalie;
Crey-Desbiolles, Caroline;
Kotera, Mitsuharu;
Dumy, Pascal

Publication type:

Article

Conserved functional domains and a novel tertiary interaction near the pseudoknot drive translational activity of hepatitis C virus and hepatitis C virus-like internal ribosome entry sites.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5537, doi. 10.1093/nar/gkp588

By:

Easton, Laura E.;
Locker, Nicolas;
Lukavsky, Peter J.

Publication type:

Article

Mechanistic studies of the modulation of cleavage activity of topoisomerase I by DNA adducts of mono- and bi-functional PtII complexes.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5432, doi. 10.1093/nar/gkp580

By:

Malina, Jaroslav;
Vrana, Oldrich;
Brabec, Viktor

Publication type:

Article

Transcription regulation of restriction-modification system Ecl18kI.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5322, doi. 10.1093/nar/gkp579

By:

Protsenko, Alexey;
Zakharova, Marina;
Nagornykh, Maxim;
Solonin, Alexander;
Severinov, Konstantin

Publication type:

Article

Stabilization of quadruplex DNA perturbs telomere replication leading to the activation of an ATR-dependent ATM signaling pathway.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5353, doi. 10.1093/nar/gkp582

By:

Rizzo, Angela;
Salvati, Erica;
Porru, Manuela;
D’Angelo, Carmen;
Stevens, Malcolm F.;
D’Incalci, Maurizio;
Leonetti, Carlo;
Gilson, Eric;
Zupi, Gabriella;
Biroccio, Annamaria

Publication type:

Article

JunB mediates enhancer/promoter activity of COL1A2 following TGF-β induction.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5378, doi. 10.1093/nar/gkp544

By:

Ponticos, Markella;
Harvey, Clare;
Ikeda, Tetsuro;
Abraham, David;
Bou-Gharios, George

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 16, p. i, doi. 10.1093/nar/gkp008
Publication type:: Article

A genome-wide library of CB4856/N2 introgression lines of Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. e110, doi. 10.1093/nar/gkp528

By:

Doroszuk, Agnieszka;
Snoek, L. Basten;
Fradin, Emilie;
Riksen, Joost;
Kammenga, Jan

Publication type:

Article

Homologs of the small RNA SgrS are broadly distributed in enteric bacteria but have diverged in size and sequence.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5465, doi. 10.1093/nar/gkp501

By:

Horler, Richard S. P.;
Vanderpool, Carin K.

Publication type:

Article

Stability of intramolecular quadruplexes: sequence effects in the central loop.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5559, doi. 10.1093/nar/gkp563

By:

Guédin, Aurore;
Alberti, Patrizia;
Mergny, Jean-Louis

Publication type:

Article

Subscriptions.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 16, p. iii, doi. 10.1093/nar/gkp924
Publication type:: Article

cDNA display: a novel screening method for functional disulfide-rich peptides by solid-phase synthesis and stabilization of mRNA–protein fusions.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. e108, doi. 10.1093/nar/gkp514

By:

Yamaguchi, Junichi;
Naimuddin, Mohammed;
Biyani, Manish;
Sasaki, Toru;
Machida, Masayuki;
Kubo, Tai;
Funatsu, Takashi;
Husimi, Yuzuru;
Nemoto, Naoto

Publication type:

Article

Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. e106, doi. 10.1093/nar/gkp507

By:

Chepelev, Iouri;
Wei, Gang;
Tang, Qingsong;
Zhao, Keji

Publication type:

Article

ORMA: a tool for identification of species-specific variations in 16S rRNA gene and oligonucleotides design.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. e109, doi. 10.1093/nar/gkp499

By:

Severgnini, Marco;
Cremonesi, Paola;
Consolandi, Clarissa;
Caredda, Giada;
De Bellis, Gianluca;
Castiglioni, Bianca

Publication type:

Article

DNA melting by RNA polymerase at the T7A1 promoter precedes the rate-limiting step at 37°C and results in the accumulation of an off-pathway intermediate.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5390, doi. 10.1093/nar/gkp560

By:

Rogozina, Anastasia;
Zaychikov, Evgeny;
Buckle, Malcolm;
Heumann, Hermann;
Sclavi, Bianca

Publication type:

Article

Overestimation of alternative splicing caused by variable probe characteristics in exon arrays.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. e107, doi. 10.1093/nar/gkp508

By:

Gaidatzis, Dimos;
Jacobeit, Kirsten;
Oakeley, Edward J.;
Stadler, Michael B.

Publication type:

Article

Differences between Ca2+ and Mg2+ in DNA binding and release by the SfiI restriction endonuclease: implications for DNA looping.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5443, doi. 10.1093/nar/gkp569

By:

Bellamy, Stuart R. W.;
Kovacheva, Yana S.;
Zulkipli, Ishan Haji;
Halford, Stephen E.

Publication type:

Article

Discovery of protein–DNA interactions by penalized multivariate regression.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5246, doi. 10.1093/nar/gkp554

By:

Zamdborg, Leonid;
Ma, Ping

Publication type:

Article

A translational signature for nucleosome positioning in vivo.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5309, doi. 10.1093/nar/gkp574

By:

Caserta, Micaela;
Agricola, Eleonora;
Churcher, Mark;
Hiriart, Edwige;
Verdone, Loredana;
Di Mauro, Ernesto;
Travers, Andrew

Publication type:

Article

Probing the relationship between Gram-negative and Gram-positive S1 proteins by sequence analysis.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5578, doi. 10.1093/nar/gkp547

By:

Salah, Philippe;
Bisaglia, Marco;
Aliprandi, Pascale;
Uzan, Marc;
Sizun, Christina;
Bontems, François

Publication type:

Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 16, p. ii, doi. 10.1093/nar/gkp920
Publication type:: Article

Efficient targeting of a SCID gene by an engineered single-chain homing endonuclease.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5405, doi. 10.1093/nar/gkp548

By:

Grizot, Sylvestre;
Smith, Julianne;
Daboussi, Fayza;
Prieto, Jesús;
Redondo, Pilar;
Merino, Nekane;
Villate, Maider;
Thomas, Séverine;
Lemaire, Laetitia;
Montoya, Guillermo;
Blanco, Francisco J.;
Pâques, Frédéric;
Duchateau, Philippe

Publication type:

Article

Fibroblast growth factor 1 induced during myogenesis by a transcription–translation coupling mechanism.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5267, doi. 10.1093/nar/gkp550

By:

Conte, Caroline;
Ainaoui, Nadera;
Delluc-Clavières, Aurélie;
Khoury, Marie P.;
Azar, Rania;
Pujol, Françoise;
Martineau, Yvan;
Pyronnet, Stéphane;
Prats, Anne-Catherine

Publication type:

Article

In the absence of writhe, DNA relieves torsional stress with localized, sequence-dependent structural failure to preserve B-form.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5568, doi. 10.1093/nar/gkp556

By:

Randall, Graham L.;
Zechiedrich, Lynn;
Pettitt, B. Montgomery

Publication type:

Article

Large, sequence-dependent effects on DNA conformation by minor groove binding compounds.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5550, doi. 10.1093/nar/gkp558

By:

Tevis, Denise S.;
Kumar, Arvind;
Stephens, Chad E.;
Boykin, David W.;
Wilson, W. David

Publication type:

Article

The role of deadenylation in the degradation of unstable mRNAs in trypanosomes.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5511, doi. 10.1093/nar/gkp571

By:

Schwede, Angela;
Manful, Theresa;
Jha, Bhaskar Anand;
Helbig, Claudia;
Bercovich, Natalia;
Stewart, Mhairi;
Clayton, Christine

Publication type:

Article

Determination of the target nucleosides for members of two families of 16S rRNA methyltransferases that confer resistance to partially overlapping groups of aminoglycoside antibiotics.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5420, doi. 10.1093/nar/gkp575

By:

Savic, Miloje;
Lovrić, Josip;
Tomic, Tatjana Ilic;
Vasiljevic, Branka;
Conn, Graeme L.

Publication type:

Article

Evidence for high bi-allelic expression of activating Ly49 receptors.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5331, doi. 10.1093/nar/gkp592

By:

Rouhi, Arefeh;
Lai, C. Benjamin;
Cheng, Tammy P.;
Takei, Fumio;
Yokoyama, Wayne M.;
Mager, Dixie L.

Publication type:

Article

Integrated study of copy number states and genotype calls using high-density SNP arrays.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5365, doi. 10.1093/nar/gkp493

By:

Sun, Wei;
Wright, Fred A.;
Tang, Zhengzheng;
Nordgard, Silje H.;
Loo, Peter Van;
Yu, Tianwei;
Kristensen, Vessela N.;
Perou, Charles M.

Publication type:

Article

Discovering ligands for a microRNA precursor with peptoid microarrays.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5486, doi. 10.1093/nar/gkp549

By:

Chirayil, Sara;
Chirayil, Rachel;
Luebke, Kevin J.

Publication type:

Article

In vitro characterization of a miR-122-sensitive double-helical switch element in the 5′ region of hepatitis C virus RNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 16, p. 5498, doi. 10.1093/nar/gkp553

By:

Díaz-Toledano, Rosa;
Ariza-Mateos, Ascensión;
Birk, Alex;
Martínez-García, Belén;
Gómez, Jordi

Publication type:

Article