Works matching IS 03051048 AND DT 2009 AND VI 37 AND IP 13

Results: 41

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Published in:: Nucleic Acids Research, 2009, v. 37, n. 13, p. iii, doi. 10.1093/nar/gkp655
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 13, p. i, doi. 10.1093/nar/gkp008
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 13, p. ii, doi. 10.1093/nar/gkp653
Publication type:: Article

Single nucleotide polymorphism arrays: a decade of biological, computational and technological advances.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4181, doi. 10.1093/nar/gkp552

By:

LaFramboise, Thomas

Publication type:

Article

A novel method for tissue-specific RNAi rescue in Drosophila.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. e93, doi. 10.1093/nar/gkp450

By:

Schulz, Joachim G.;
David, Guido;
Hassan, Bassem A.

Publication type:

Article

Efficient silencing of gene expression with modular trimeric Pol II expression cassettes comprising microRNA shuttles.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. e91, doi. 10.1093/nar/gkp446

By:

Ely, Abdullah;
Naidoo, Tanusha;
Arbuthnot, Patrick

Publication type:

Article

A thermodynamic approach to PCR primer design.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. e95, doi. 10.1093/nar/gkp443

By:

Mann, Tobias;
Humbert, Richard;
Dorschner, Michael;
Stamatoyannopoulos, John;
Noble, William Stafford

Publication type:

Article

Increasing the relative expression of endogenous non-coding Steroid Receptor RNA Activator (SRA) in human breast cancer cells using modified oligonucleotides.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4518, doi. 10.1093/nar/gkp441

By:

Cooper, Charlton;
Guo, Jimin;
Yan, Yi;
Chooniedass-Kothari, Shilpa;
Hube, Florent;
Hamedani, Mohammad K.;
Murphy, Leigh C.;
Myal, Yvonne;
Leygue, Etienne

Publication type:

Article

High-affinity triplex targeting of double stranded DNA using chemically modified peptide nucleic acid oligomers.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4498, doi. 10.1093/nar/gkp437

By:

Hansen, Mads E.;
Bentin, Thomas;
Nielsen, Peter E.

Publication type:

Article

Tracking transcription factor complexes on DNA using total internal reflectance fluorescence protein binding microarrays.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. e94, doi. 10.1093/nar/gkp424

By:

Bonham, Andrew J.;
Neumann, Thorsten;
Tirrell, Matthew;
Reich, Norbert O.

Publication type:

Article

Measuring spatial preferences at fine-scale resolution identifies known and novel cis-regulatory element candidates and functional motif-pair relationships.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. e92, doi. 10.1093/nar/gkp423

By:

Yokoyama, Ken Daigoro;
Ohler, Uwe;
Wray, Gregory A.

Publication type:

Article

Processing of thymine glycol in a clustered DNA damage site: mutagenic or cytotoxic.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4430, doi. 10.1093/nar/gkp422

By:

Bellon, Sophie;
Shikazono, Naoya;
Cunniffe, Siobhan;
Lomax, Martine;
O’Neill, Peter

Publication type:

Article

Construction and functional analyses of a comprehensive σ54 site-directed mutant library using alanine–cysteine mutagenesis.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4482, doi. 10.1093/nar/gkp419

By:

Xiao, Yan;
Wigneshweraraj, Siva R.;
Weinzierl, Robert;
Wang, Yi-Ping;
Buck, Martin

Publication type:

Article

Light-activated RNA interference using double-stranded siRNA precursors modified using a remarkable regiospecificity of diazo-based photolabile groups.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4508, doi. 10.1093/nar/gkp415

By:

Shah, Samit;
Jain, Piyush K.;
Kala, Ashish;
Karunakaran, Dipu;
Friedman, Simon H.

Publication type:

Article

Directed evolution of an orthogonal nucleoside analog kinase via fluorescence-activated cell sorting.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4472, doi. 10.1093/nar/gkp400

By:

Liu, Lingfeng;
Li, Yongfeng;
Liotta, Dennis;
Lutz, Stefan

Publication type:

Article

Mismatch repair and nucleotide excision repair proteins cooperate in the recognition of DNA interstrand crosslinks.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4420, doi. 10.1093/nar/gkp399

By:

Zhao, Junhua;
Jain, Aklank;
Iyer, Ravi R.;
Modrich, Paul L.;
Vasquez, Karen M.

Publication type:

Article

RFXB and its splice variant RFXBSV mediate the antagonism between IFNγ and TGFβ on COL1A2 transcription in vascular smooth muscle cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4393, doi. 10.1093/nar/gkp398

By:

Fang, Mingming;
Kong, Xiaocen;
Li, Ping;
Fang, Fei;
Wu, Xiaoyan;
Bai, Hui;
Qi, Xiaohong;
Chen, Qi;
Xu, Yong

Publication type:

Article

A conformational change in the helicase core is necessary but not sufficient for RNA unwinding by the DEAD box helicase YxiN.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4464, doi. 10.1093/nar/gkp397

By:

Karow, Anne R.;
Klostermeier, Dagmar

Publication type:

Article

High-throughput sequence-based epigenomic analysis of Alu repeats in human cerebellum.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4331, doi. 10.1093/nar/gkp393

By:

Xie, Hehuang;
Wang, Min;
Bonaldo, Maria de F.;
Smith, Christina;
Rajaram, Veena;
Goldman, Stewart;
Tomita, Tadanori;
Soares, Marcelo B.

Publication type:

Article

The role of DNA damage response pathways in chromosome fragility in Fragile X syndrome.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4385, doi. 10.1093/nar/gkp391

By:

Kumari, Daman;
Somma, Valentina;
Nakamura, Asako J.;
Bonner, William M.;
D’Ambrosio, Ettoré;
Usdin, Karen

Publication type:

Article

ROS1 5-methylcytosine DNA glycosylase is a slow-turnover catalyst that initiates DNA demethylation in a distributive fashion.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4264, doi. 10.1093/nar/gkp390

By:

Ponferrada-Marín, María Isabel;
Roldán-Arjona, Teresa;
Ariza, Rafael R.

Publication type:

Article

Inhibition of translesion DNA polymerase by archaeal reverse gyrase.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4287, doi. 10.1093/nar/gkp386

By:

Valenti, Anna;
Perugino, Giuseppe;
Nohmi, Takehiko;
Rossi, Mosè;
Ciaramella, Maria

Publication type:

Article

R-loops do not accumulate in transcription-defective hpr1-101 mutants: implications for the functional role of THO/TREX.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4315

By:

Gómez-González, Belén;
Aguilera, Andrés

Publication type:

Article

Physical and functional interactions between Escherichia coli MutL and the Vsr repair endonuclease.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4453, doi. 10.1093/nar/gkp380

By:

Heinze, Roger J.;
Giron-Monzon, Luis;
Solovyova, Alexandra;
Elliot, Sarah L.;
Geisler, Sven;
Cupples, Claire G.;
Connolly, Bernard A.;
Friedhoff, Peter

Publication type:

Article

The DNA-recognition mode shared by archaeal feast/famine-regulatory proteins revealed by the DNA-binding specificities of TvFL3, FL10, FL11 and Ss-LrpB.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4407, doi. 10.1093/nar/gkp378

By:

Yokoyama, Katsushi;
Nogami, Hideki;
Kabasawa, Mamiko;
Ebihara, Sonomi;
Shimowasa, Ai;
Hashimoto, Keiko;
Kawashima, Tsuyoshi;
Ishijima, Sanae A.;
Suzuki, Masashi

Publication type:

Article

A biochemically active MCM-like helicase in Bacillus cereus.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4441, doi. 10.1093/nar/gkp376

By:

Samuels, Martin;
Gulati, Gaurav;
Shin, Jae-Ho;
Opara, Rejoice;
McSweeney, Elizabeth;
Sekedat, Matt;
Long, Stephen;
Kelman, Zvi;
Jeruzalmi, David

Publication type:

Article

HMGA2 exhibits dRP/AP site cleavage activity and protects cancer cells from DNA-damage-induced cytotoxicity during chemotherapy.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4371, doi. 10.1093/nar/gkp375

By:

Summer, Heike;
Li, Ou;
Bao, Qiuye;
Zhan, Lihong;
Peter, Sabrina;
Sathiyanathan, Padmapriya;
Henderson, Dana;
Klonisch, Thomas;
Goodman, Steven D.;
Dröge, Peter

Publication type:

Article

Histone H2a mRNA interacts with Lin28 and contains a Lin28-dependent posttranscriptional regulatory element.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4256, doi. 10.1093/nar/gkp372

By:

Xu, Bingsen;
Huang, Yingqun

Publication type:

Article

The Walker B motif in avian FANCM is required to limit sister chromatid exchanges but is dispensable for DNA crosslink repair.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4360, doi. 10.1093/nar/gkp365

By:

Rosado, Ivan V.;
Niedzwiedz, Wojciech;
Alpi, Arno F.;
Patel, Ketan J.

Publication type:

Article

Base extrusion is found at helical junctions between right- and left-handed forms of DNA and RNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4353, doi. 10.1093/nar/gkp364

By:

Kim, Doyoun;
Reddy, Sanjith;
Kim, Dong Young;
Rich, Alexander;
Lee, Sangho;
Kim, Kyeong Kyu;
Kim, Yang-Gyun

Publication type:

Article

Diverse transcription influences can be insulated by the Drosophila SF1 chromatin boundary.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4227, doi. 10.1093/nar/gkp362

By:

Majumder, Parimal;
Roy, Sharmila;
Belozerov, Vladimir E.;
Bosu, Dimple;
Puppali, Meena;
Cai, Haini N.

Publication type:

Article

Role of PCNA-dependent stimulation of 3′-phosphodiesterase and 3′–5′ exonuclease activities of human Ape2 in repair of oxidative DNA damage.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4247, doi. 10.1093/nar/gkp357

By:

Burkovics, Peter;
Hajdú, Ildikó;
Szukacsov, Valéria;
Unk, Ildiko;
Haracska, Lajos

Publication type:

Article

Specific sequences within arginine–glycine-rich domains affect mRNA-binding protein function.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4322, doi. 10.1093/nar/gkp349

By:

McBride, Anne E.;
Conboy, Ana K.;
Brown, Shanique P.;
Ariyachet, Chaiyaboot;
Rutledge, Kate L.

Publication type:

Article

Intra- and inter-molecular recombination of mitochondrial DNA after in vivo induction of multiple double-strand breaks.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4218, doi. 10.1093/nar/gkp348

By:

Bacman, Sandra R.;
Williams, Sion L.;
Moraes, Carlos T.

Publication type:

Article

CUGBP2 directly interacts with U2 17S snRNP components and promotes U2 snRNA binding to cardiac troponin T pre-mRNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4275, doi. 10.1093/nar/gkp346

By:

Goo, Young-Hwa;
Cooper, Thomas A.

Publication type:

Article

The RNA binding protein Cwc2 interacts directly with the U6 snRNA to link the nineteen complex to the spliceosome during pre-mRNA splicing.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4205, doi. 10.1093/nar/gkp341

By:

McGrail, Joanne C.;
Krause, André;
O’Keefe, Raymond T.

Publication type:

Article

Detection of intergenic non-coding RNAs expressed in the main developmental stages in Drosophila melanogaster.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4308, doi. 10.1093/nar/gkp334

By:

Li, Zheng;
Liu, Min;
Zhang, Li;
Zhang, Wenxia;
Gao, Ge;
Zhu, Zuoyan;
Wei, Liping;
Fan, Qichang;
Long, Manyuan

Publication type:

Article

Characterization of sINR, a strict version of the Initiator core promoter element.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4234, doi. 10.1093/nar/gkp315

By:

Yarden, Ganit;
Elfakess, Rofa;
Gazit, Kfir;
Dikstein, Rivka

Publication type:

Article

Ets-1 p51 and p42 isoforms differentially modulate Stromelysin-1 promoter according to induced DNA bend orientation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4341, doi. 10.1093/nar/gkp307

By:

Leprivier, Gabriel;
Baillat, David;
Begue, Agnès;
Hartmann, Brigitte;
Aumercier, Marc

Publication type:

Article

Human PSF binds to RAD51 and modulates its homologous-pairing and strand-exchange activities.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4296, doi. 10.1093/nar/gkp298

By:

Morozumi, Yuichi;
Takizawa, Yoshimasa;
Takaku, Motoki;
Kurumizaka, Hitoshi

Publication type:

Article

Evidence of genome-wide G4 DNA-mediated gene expression in human cancer cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 13, p. 4194, doi. 10.1093/nar/gkn1076

By:

Verma, Anjali;
Yadav, Vinod Kumar;
Basundra, Richa;
Kumar, Akinchan;
Chowdhury, Shantanu

Publication type:

Article