Works matching IS 03051048 AND DT 2009 AND VI 37 AND IP 12

Results: 41

Subscriptions.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 12, p. iii, doi. 10.1093/nar/gkp622
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 12, p. i, doi. 10.1093/nar/gkp008
Publication type:: Article

Nucleic Acids Research.

Published in:: Nucleic Acids Research, 2009, v. 37, n. 12, p. ii, doi. 10.1093/nar/gkp620
Publication type:: Article

Using high-density exon arrays to profile gene expression in closely related species.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e90, doi. 10.1093/nar/gkp420

By:

Lin, Lan;
Liu, Song;
Brockway, Heather;
Seok, Junhee;
Jiang, Peng;
Wong, Wing Hung;
Xing, Yi

Publication type:

Article

A complex-centric view of protein network evolution.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e88, doi. 10.1093/nar/gkp414

By:

Yosef, Nir;
Kupiec, Martin;
Ruppin, Eytan;
Sharan, Roded

Publication type:

Article

Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e89, doi. 10.1093/nar/gkp413

By:

Kamalakaran, Sitharthan;
Kendall, Jude;
Zhao, Xiaoyue;
Tang, Chunlao;
Khan, Sohail;
Ravi, Kandasamy;
Auletta, Theresa;
Riggs, Michael;
Wang, Yun;
Helland, Åslaug;
Naume, Bjørn;
Dimitrova, Nevenka;
Børresen-Dale, Anne-Lise;
Hicks, Jim;
Lucito, Robert

Publication type:

Article

In silico selection of RNA aptamers.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e87, doi. 10.1093/nar/gkp408

By:

Chushak, Yaroslav;
Stone, Morley O.

Publication type:

Article

Quantitative evaluation of DNA methylation by optimization of a differential-high resolution melt analysis protocol.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e86, doi. 10.1093/nar/gkp383

By:

Malentacchi, Francesca;
Forni, Giulia;
Vinci, Serena;
Orlando, Claudio

Publication type:

Article

Identification of candidate regulatory SNPs by combination of transcription-factor-binding site prediction, SNP genotyping and haploChIP.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e85, doi. 10.1093/nar/gkp381

By:

Ameur, Adam;
Rada-Iglesias, Alvaro;
Komorowski, Jan;
Wadelius, Claes

Publication type:

Article

p53-dependent antiviral RNA-interference facilitates tumor-selective viral replication.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. e84, doi. 10.1093/nar/gkp374

By:

Gürlevik, Engin;
Woller, Norman;
Schache, Peter;
Malek, Nisar P.;
Wirth, Thomas C.;
Zender, Lars;
Manns, Michael P.;
Kubicka, Stefan;
Kühnel, Florian

Publication type:

Article

Long-range activation of FKBP51 transcription by the androgen receptor via distal intronic enhancers.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4135, doi. 10.1093/nar/gkp352

By:

Makkonen, Harri;
Kauhanen, Miia;
Paakinaho, Ville;
Jääskeläinen, Tiina;
Palvimo, Jorma J.

Publication type:

Article

Structural insights into CUG repeats containing the ‘stretched U–U wobble’: implications for myotonic dystrophy.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4149, doi. 10.1093/nar/gkp350

By:

Kiliszek, Agnieszka;
Kierzek, Ryszard;
Krzyzosiak, Wlodzimierz J.;
Rypniewski, Wojciech

Publication type:

Article

Functional mapping of the interaction between TDP-43 and hnRNP A2 in vivo.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4116, doi. 10.1093/nar/gkp342

By:

D’Ambrogio, Andrea;
Buratti, Emanuele;
Stuani, Cristiana;
Guarnaccia, Corrado;
Romano, Maurizio;
Ayala, Youhna M.;
Baralle, Francisco E.

Publication type:

Article

The formation pathway of i-motif tetramers.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4127, doi. 10.1093/nar/gkp340

By:

Leroy, Jean-Louis

Publication type:

Article

Molecular characterization of SMILE as a novel corepressor of nuclear receptors.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4100, doi. 10.1093/nar/gkp333

By:

Xie, Yuan-Bin;
Nedumaran, Balachandar;
Choi, Hueng-Sik

Publication type:

Article

FHL2 interacts with and acts as a functional repressor of Id2 in human neuroblastoma cells.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3996, doi. 10.1093/nar/gkp332

By:

Han, Weidong;
Wu, Zhiqiang;
Zhao, Yali;
Meng, Yuanguang;
Si, Yiling;
Yang, Jie;
Fu, Xiaobing;
Yu, Li

Publication type:

Article

Dynamics of RecA filaments on single-stranded DNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4089, doi. 10.1093/nar/gkp326

By:

van Loenhout, Marijn T. J.;
van der Heijden, Thijn;
Kanaar, Roland;
Wyman, Claire;
Dekker, Cees

Publication type:

Article

Analyzing the forces binding a restriction endonuclease to DNA using a synthetic nanopore.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4170, doi. 10.1093/nar/gkp317

By:

Dorvel, B.;
Sigalov, G.;
Zhao, Q.;
Comer, J.;
Dimitrov, V.;
Mirsaidov, U.;
Aksimentiev, A.;
Timp, G.

Publication type:

Article

Bacillus subtilis polynucleotide phosphorylase 3′-to-5′ DNase activity is involved in DNA repair.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4157, doi. 10.1093/nar/gkp314

By:

Cardenas, Paula P.;
Carrasco, Begoña;
Sanchez, Humberto;
Deikus, Gintaras;
Bechhofer, David H;
Alonso, Juan C

Publication type:

Article

Structural and dynamic characterization of the upper part of the HIV-1 cTAR DNA hairpin.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4043, doi. 10.1093/nar/gkp297

By:

Zargarian, Loussiné;
Kanevsky, Igor;
Bazzi, Ali;
Boynard, Jonathan;
Chaminade, Françoise;
Fossé, Philippe;
Mauffret, Olivier

Publication type:

Article

Contribution of ribosomal residues to P-site tRNA binding.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4033, doi. 10.1093/nar/gkp296

By:

Shoji, Shinichiro;
Abdi, Nimo M.;
Bundschuh, Ralf;
Fredrick, Kurt

Publication type:

Article

Experimentally based contact energies decode interactions responsible for protein–DNA affinity and the role of molecular waters at the binding interface.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4076, doi. 10.1093/nar/gkp289

By:

Temiz, N. Alpay;
Camacho, Carlos J.

Publication type:

Article

One RNA aptamer sequence, two structures: a collaborating pair that inhibits AMPA receptors.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4022, doi. 10.1093/nar/gkp284

By:

Huang, Zhen;
Pei, Weimin;
Han, Yan;
Jayaseelan, Sabarinath;
Shekhtman, Alexander;
Shi, Hua;
Niu, Li

Publication type:

Article

Requirement for XLF/Cernunnos in alignment-based gap filling by DNA polymerases λ and μ for nonhomologous end joining in human whole-cell extracts.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4055, doi. 10.1093/nar/gkp283

By:

Akopiants, Konstantin;
Zhou, Rui-Zhe;
Mohapatra, Susovan;
Valerie, Kristoffer;
Lees-Miller, Susan P.;
Lee, Kyung-Jong;
Chen, David J.;
Revy, Patrick;
de Villartay, Jean-Pierre;
Povirk, Lawrence F.

Publication type:

Article

Folding of the cocaine aptamer studied by EPR and fluorescence spectroscopies using the bifunctional spectroscopic probe Ç.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3990, doi. 10.1093/nar/gkp277

By:

Cekan, Pavol;
Jonsson, Elvar Örn;
Sigurdsson, Snorri Th.

Publication type:

Article

Stochastic sampling of the RNA structural alignment space.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4063, doi. 10.1093/nar/gkp276

By:

Harmanci, Arif Ozgun;
Sharma, Gaurav;
Mathews, David H.

Publication type:

Article

Identification of Apurinic/apyrimidinic endonuclease 1 (APE1) as the endoribonuclease that cleaves c-myc mRNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3946, doi. 10.1093/nar/gkp275

By:

Barnes, Tavish;
Kim, Wan-Cheol;
Mantha, Anil K.;
Kim, Sang-Eun;
Izumi, Tadahide;
Mitra, Sankar;
Lee, Chow H.

Publication type:

Article

Comprehensive prediction of novel microRNA targets in Arabidopsis thaliana.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 4010, doi. 10.1093/nar/gkp272

By:

Alves-Junior, Leonardo;
Niemeier, Sandra;
Hauenschild, Arne;
Rehmsmeier, Marc;
Merkle, Thomas

Publication type:

Article

One RNA plays three roles to provide catalytic activity to a group I intron lacking an endogenous internal guide sequence.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3981, doi. 10.1093/nar/gkp271

By:

Vaidya, Nilesh;
Lehman, Niles

Publication type:

Article

A glycolytic burst drives glucose induction of global histone acetylation by picNuA4 and SAGA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3969, doi. 10.1093/nar/gkp270

By:

Friis, R. Magnus N.;
Wu, Bob P.;
Reinke, Stacey N.;
Hockman, Darren J.;
Sykes, Brian D.;
Schultz, Michael C.

Publication type:

Article

S-Adenosyl homocysteine and DNA ends stimulate promiscuous nuclease activities in the Type III restriction endonuclease EcoPI.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3934, doi. 10.1093/nar/gkp267

By:

Peakman, Luke J.;
Szczelkun, Mark D.

Publication type:

Article

Both helix topology and counterion distribution contribute to the more effective charge screening in dsRNA compared with dsDNA.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3887, doi. 10.1093/nar/gkp257

By:

Pabit, Suzette A.;
Qiu, Xiangyun;
Lamb, Jessica S.;
Li, Li;
Meisburger, Steve P.;
Pollack, Lois

Publication type:

Article

Highly efficient incorporation of the fluorescent nucleotide analogs tC and tCO by Klenow fragment.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3924, doi. 10.1093/nar/gkp266

By:

Sandin, Peter;
Stengel, Gudrun;
Ljungdahl, Thomas;
Börjesson, Karl;
Macao, Bertil;
Wilhelmsson, L. Marcus

Publication type:

Article

Remodeling of chromatin structure within the promoter is important for bmp-2-induced fgfr3 expression.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3897, doi. 10.1093/nar/gkp261

By:

Sun, Fenyong;
Chen, Qiongyu;
Yang, Songhai;
Pan, Qiuhui;
Ma, Ji;
Wan, Yang;
Chang, Chih-Hao;
Hong, An

Publication type:

Article

High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3829, doi. 10.1093/nar/gkp260

By:

Oda, Mayumi;
Glass, Jacob L.;
Thompson, Reid F.;
Mo, Yongkai;
Olivier, Emmanuel N.;
Figueroa, Maria E.;
Selzer, Rebecca R.;
Richmond, Todd A.;
Zhang, Xinmin;
Dannenberg, Luke;
Green, Roland D.;
Melnick, Ari;
Hatchwell, Eli;
Bouhassira, Eric E.;
Verma, Amit;
Suzuki, Masako;
Greally, John M.

Publication type:

Article

A genome-wide screen for essential yeast genes that affect telomere length maintenance.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3840, doi. 10.1093/nar/gkp259

By:

Ungar, Lior;
Yosef, Nir;
Sela, Yael;
Sharan, Roded;
Ruppin, Eytan;
Kupiec, Martin

Publication type:

Article

IHF-binding sites inhibit DNA loop formation and transcription initiation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3878, doi. 10.1093/nar/gkp258

By:

Huo, Yi-Xin;
Zhang, Yuan-Tao;
Xiao, Yan;
Zhang, Xiaodong;
Buck, Martin;
Kolb, Annie;
Wang, Yi-Ping

Publication type:

Article

The ATR-Chk1 pathway plays a role in the generation of centrosome aberrations induced by Rad51C dysfunction.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3959, doi. 10.1093/nar/gkp262

By:

Katsura, Mari;
Tsuruga, Takanori;
Date, Osamu;
Yoshihara, Takashi;
Ishida, Mari;
Tomoda, Yoshitaka;
Okajima, Miyuki;
Takaku, Motoki;
Kurumizaka, Hitoshi;
Kinomura, Aiko;
Mishima, Hiromu K.;
Miyagawa, Kiyoshi

Publication type:

Article

Oligonucleotides suppress PKB/Akt and act as superinductors of apoptosis in human keratinocytes.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3850, doi. 10.1093/nar/gkp252

By:

Kippenberger, Stefan;
Müller, Jutta;
Schultz, Maike;
Dorn, Annette;
Bock, Andreas;
Aygün, Hüseyin;
Thaçi, Diamant;
Hofmann, Matthias;
Kaufmann, Roland;
Bernd, August

Publication type:

Article

Structural basis for m7G-cap hypermethylation of small nuclear, small nucleolar and telomerase RNA by the dimethyltransferase TGS1.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3865, doi. 10.1093/nar/gkp249

By:

Monecke, Thomas;
Dickmanns, Achim;
Ficner, Ralf

Publication type:

Article

Cellular responses to DNA double-strand breaks after low-dose γ-irradiation.

Published in:

Nucleic Acids Research, 2009, v. 37, n. 12, p. 3912, doi. 10.1093/nar/gkp237

By:

Asaithamby, Aroumougame;
Chen, David J.

Publication type:

Article