Works matching IS 03051048 AND DT 2008 AND VI 36 AND IP 4

Results: 38

Cell-free cloning of highly expanded CTG repeats by amplification of dimerized expanded repeats.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e24

By:

Osborne, Robert J.;
Thornton, Charles A.

Publication type:

Article

A new class of cleavable fluorescent nucleotides: synthesis and optimization as reversible terminators for DNA sequencing by synthesis†.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e25, doi. 10.1093/nar/gkn021

By:

Turcatti, Gerardo;
Romieu, Anthony;
Fedurco, Milan;
Tairi, Ana-Paula

Publication type:

Article

Detection of a circadian enhancer in the mDbp promoter using prokaryotic transposon vector-based strategy.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e23, doi. 10.1093/nar/gkn018

By:

Kiyohara, Yota B.;
Nishii, Keigo;
Ukai-Tadenuma, Maki;
Ueda, Hiroki R.;
Uchiyama, Yasuo;
Yagita, Kazuhiro

Publication type:

Article

Commonality of functional annotation: a method for prioritization of candidate genes from genome-wide linkage studies†.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e26, doi. 10.1093/nar/gkn007

By:

Shriner, Daniel;
Baye, Tesfaye M.;
Padilla, Miguel A.;
Zhang, Shiju;
Vaughan, Laura K.;
Loraine, Ann E.

Publication type:

Article

Multiple DNA-binding sites in Tetrahymena telomerase.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1260, doi. 10.1093/nar/gkm866

By:

Finger, Sharon N.;
Bryan, Tracy M.

Publication type:

Article

Meta-prediction of phosphorylation sites with weighted voting and restricted grid search parameter selection.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e22, doi. 10.1093/nar/gkm848

By:

Wan, Ji;
Kang, Shuli;
Tang, Chuanning;
Yan, Jianhua;
Ren, Yongliang;
Liu, Jie;
Gao, Xiaolian;
Banerjee, Arindam;
Ellis, Lynda B. M.;
Li, Tongbin

Publication type:

Article

Corrigendum.

Published in:: Nucleic Acids Research, 2008, v. 36, n. 4, p. 1400
Publication type:: Article

Knockdown of TNFR1 by the sense strand of an ICAM-1 siRNA: dissection of an off-target effect.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1081

By:

Clark, Paul R.;
Pober, Jordan S.;
Kluger, Martin S.

Publication type:

Article

EXOG, a novel paralog of Endonuclease G in higher eukaryotes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1369, doi. 10.1093/nar/gkm1169

By:

Cymerman, Iwona A.;
Chung, Inn;
Beckmann, Benedikt M.;
Bujnicki, Janusz M.;
Meiss, Gregor

Publication type:

Article

The third RNA recognition motif of Drosophila ELAV protein has a role in multimerization.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1390, doi. 10.1093/nar/gkm1168

By:

Toba, Gakuta;
White, Kalpana

Publication type:

Article

Longevity and resistance to stress correlate with DNA repair capacity in Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1380, doi. 10.1093/nar/gkm1161

By:

Hyun, Moonjung;
Lee, Jihyun;
Lee, Kyungjin;
May, Alfred;
Bohr, Vilhelm A.;
Ahn, Byungchan

Publication type:

Article

Coupling of DNA binding and helicase activity is mediated by a conserved loop in the MCM protein.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1309, doi. 10.1093/nar/gkm1160

By:

Sakakibara, Nozomi;
Kasiviswanathan, Rajesh;
Melamud, Eugene;
Han, Mimi;
Schwarz, Frederick P.;
Kelman, Zvi

Publication type:

Article

Inhibition of DNA replication fork progression and mutagenic potential of 1, N6-ethenoadenine and 8-oxoguanine in human cell extracts.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1300

By:

Tolentino, Joel H.;
Burke, Tom J.;
Mukhopadhyay, Suparna;
McGregor, W. Glenn;
Basu, Ashis K.

Publication type:

Article

Catalytic mechanism of the tryptophan activation reaction revealed by crystal structures of human tryptophanyl-tRNA synthetase in different enzymatic states.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1288, doi. 10.1093/nar/gkm1153

By:

Shen, Ning;
Zhou, Minyu;
Yang, Bei;
Yu, Yadong;
Dong, Xianchi;
Ding, Jianping

Publication type:

Article

Target genes and structure of the direct repeats in the DNA-binding sequences of the response regulator PhoP in Streptomyces coelicolor.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1358, doi. 10.1093/nar/gkm1150

By:

Sola-Landa, Alberto;
Rodríguez-García, Antonio;
Apel, Alexander Kristian;
Martín, Juan F.

Publication type:

Article

Microarray analysis using disiloxyl 70mer oligonucleotides.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1334

By:

Björklund, Marcus Gry;
Natanaelsson, Christian;
Karlström, Amelie Eriksson;
Hao, Yong;
Lundeberg, Joakim

Publication type:

Article

Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e21, doi. 10.1093/nar/gkm1144

By:

van Bakel, Harm;
van Werven, Folkert J.;
Radonjic, Marijana;
Brok, Mariel O.;
van Leenen, Dik;
Holstege, Frank C. P.;
Timmers, H. T. Marc

Publication type:

Article

A conserved U-rich RNA region implicated in regulation of translation in Plasmodium female gametocytes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1176, doi. 10.1093/nar/gkm1142

By:

Braks, Joanna A. M.;
Mair, Gunnar R.;
Franke-Fayard, Blandine;
Janse, Chris J.;
Waters, Andrew P.

Publication type:

Article

DNA mimicry by a high-affinity anti-NF-κB RNA aptamer.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1227, doi. 10.1093/nar/gkm1141

By:

Reiter, Nicholas J.;
Maher, L. James;
Butcher, Samuel E.

Publication type:

Article

Thermodynamic characterization of specific interactions between the human Lon protease and G-quartet DNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1273

By:

Chen, Si-Han;
Suzuki, Carolyn K.;
Wu, Shih-Hsiung

Publication type:

Article

Conserved elements with potential to form polymorphic G-quadruplex structures in the first intron of human genes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1321, doi. 10.1093/nar/gkm1138

By:

Eddy, Johanna;
Maizels, Nancy

Publication type:

Article

G-quadruplex preferentially forms at the very 3′ end of vertebrate telomeric DNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1200, doi. 10.1093/nar/gkm1137

By:

Tang, Jun;
Kan, Zhong-yuan;
Yao, Yuan;
Wang, Quan;
Hao, Yu-hua;
Tan, Zheng

Publication type:

Article

Characterization and evolutionary history of an archaeal kinase involved in selenocysteinyl-tRNA formation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1247, doi. 10.1093/nar/gkm1134

By:

Sherrer, R. Lynn;
O’Donoghue, Patrick;
Söll, Dieter

Publication type:

Article

Phytohormone abscisic acid control RNA-dependent RNA polymerase 6 gene expression and post-transcriptional gene silencing in rice cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1220

By:

Yang, Ji Hyun;
Seo, Hyun Hee;
Han, So Jung;
Yoon, Eun Kyung;
Yang, Moon Sik;
Lee, Woo Sung

Publication type:

Article

Proteomic screen defines the hepatocyte nuclear factor 1α-binding partners and identifies HMGB1 as a new cofactor of HNF1α.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1209, doi. 10.1093/nar/gkm1131

By:

Yu, Miao;
Wang, Jian;
Li, Wei;
Yuan, Yan Zhi;
Li, Chang Yan;
Qian, Xiao Hong;
Xu, Wang Xiang;
Zhan, Yi Qun;
Yang, Xiao Ming

Publication type:

Article

Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3′ETS in Arabidopsis.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1163, doi. 10.1093/nar/gkm1130

By:

Comella, P.;
Pontvianne, F.;
Lahmy, S.;
Vignols, F.;
Barbezier, N.;
DeBures, A.;
Jobet, E.;
Brugidou, E.;
Echeverria, M.;
Sáez-Vásquez, J.

Publication type:

Article

Biochemical and structural characterization of Cren7, a novel chromatin protein conserved among Crenarchaea.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1129, doi. 10.1093/nar/gkm1128

By:

Guo, Li;
Feng, Yingang;
Zhang, Zhenfeng;
Yao, Hongwei;
Luo, Yuanming;
Wang, Jinfeng;
Huang, Li

Publication type:

Article

Chromatinized templates reveal the requirement for the LEDGF/p75 PWWP domain during HIV-1 integration in vitro.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1237

By:

Botbol, Yaïr;
Raghavendra, Nidhanapati K.;
Rahman, Shaila;
Engelman, Alan;
Lavigne, Marc

Publication type:

Article

Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1343, doi. 10.1093/nar/gkm1068

By:

Kasahara, Koji;
Ki, Sewon;
Aoyama, Kayo;
Takahashi, Hiroyuki;
Kokubo, Tetsuro

Publication type:

Article

Kinking the double helix by bending deformation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1120, doi. 10.1093/nar/gkm1125

By:

Du, Quan;
Kotlyar, Alexander;
Vologodskii, Alexander

Publication type:

Article

Structural insights into RNA-dependent eukaryal and archaeal selenocysteine formation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1187

By:

Araiso, Yuhei;
Palioura, Sotiria;
Ishitani, Ryuichiro;
Sherrer, R. Lynn;
O’Donoghue, Patrick;
Yuan, Jing;
Oshikane, Hiroyuki;
Domae, Naoshi;
DeFranco, Julian;
Söll, Dieter;
Nureki, Osamu

Publication type:

Article

Kluyveromyces lactis γ-toxin, a ribonuclease that recognizes the anticodon stem loop of tRNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1072

By:

Lu, Jian;
Esberg, Anders;
Huang, Bo;
Byström, Anders S.

Publication type:

Article

Antagonism of microRNA-122 in mice by systemically administered LNA-antimiR leads to up-regulation of a large set of predicted target mRNAs in the liver.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1153, doi. 10.1093/nar/gkm1113

By:

Elmén, Joacim;
Lindow, Morten;
Silahtaroglu, Asli;
Bak, Mads;
Christensen, Mette;
Lind-Thomsen, Allan;
Hedtjärn, Maj;
Hansen, Jens Bo;
Hansen, Henrik Frydenlund;
Straarup, Ellen Marie;
McCullagh, Keith;
Kearney, Phil;
Kauppinen, Sakari

Publication type:

Article

Loop dependence of the stability and dynamics of nucleic acid hairpins.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1098

By:

Kuznetsov, Serguei V.;
Ren, Cha-Chi;
Woodson, Sarah A.;
Ansari, Anjum

Publication type:

Article

Assembly and structural analysis of a covalently closed nano-scale DNA cage.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1113, doi. 10.1093/nar/gkm1124

By:

Andersen, Felicie F.;
Knudsen, Bjarne;
Oliveira, Cristiano Luis Pinto;
Frøhlich, Rikke F.;
Krüger, Dinna;
Bungert, Jörg;
Agbandje-McKenna, Mavis;
McKenna, Robert;
Juul, Sissel;
Veigaard, Christopher;
Koch, Jørn;
Rubinstein, John L.;
Guldbrandtsen, Bernt;
Hede, Marianne S.;
Karlsson, Göran;
Andersen, Anni H.;
Pedersen, Jan Skov;
Knudsen, Birgitta R.

Publication type:

Article

Measuring the dynamic surface accessibility of RNA with the small paramagnetic molecule TEMPOL.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. e20, doi. 10.1093/nar/gkm1062

By:

Venditti, Vincenzo;
Niccolai, Neri;
Butcher, Samuel E.

Publication type:

Article

Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1138, doi. 10.1093/nar/gkm1048

By:

Geary, Cody;
Baudrey, Stéphanie;
Jaeger, Luc

Publication type:

Article

The cucumovirus 2b gene drives selection of inter-viral recombinants affecting the crossover site, the acceptor RNA and the rate of selection.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 4, p. 1057, doi. 10.1093/nar/gkm1036

By:

Shi, Bu-Jun;
Symons, Robert H.;
Palukaitis, Peter

Publication type:

Article