Works matching IS 03051048 AND DT 2008 AND VI 36 AND IP 2

Results: 38

Rho-independent transcription terminators inhibit RNase P processing of the secG leuU and metT tRNA polycistronic transcripts in Escherichia coli.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 364

By:

Mohanty, Bijoy K.;
Kushner, Sidney R.

Publication type:

Article

Cordycepin-hypersensitive growth links elevated polyphosphate levels to inhibition of poly(A) polymerase in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 353

By:

Holbein, Sandra;
Freimoser, Florian M.;
Werner, Thomas P.;
Wengi, Agnieszka;
Dichtl, Bernhard

Publication type:

Article

Efficient siRNA selection using hybridization thermodynamics.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 640

By:

Lu, Zhi John;
Mathews, David H.

Publication type:

Article

Indirect readout in drug-DNA recognition: role of sequence-dependent DNA conformation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 376

By:

Araúzo-Bravo, Marcos J.;
Sarai, Akinori

Publication type:

Article

Escherichia coli low-copy-number plasmid R1 centromere parC forms a U-shaped complex with its binding protein ParR.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 607

By:

Hoischen, C.;
Bussiek, M.;
Langowski, J.;
Diekmann, S.

Publication type:

Article

Nuclear RNA export factor 7 is localized in processing bodies and neuronal RNA granules through interactions with shuttling hnRNPs.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 616, doi. 10.1093/nar/gkm556

By:

Katahira, Jun;
Miki, Takashi;
Takano, Keizo;
Maruhashi, Mitsuji;
Uchikawa, Masanori;
Tachibana, Taro;
Yoneda, Yoshihiro

Publication type:

Article

Gene Ontology annotation quality analysis in model eukaryotes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. e12, doi. 10.1093/nar/gkm1167

By:

Buza, Teresia J.;
McCarthy, Fiona M.;
Wang, Nan;
Bridges, Susan M.;
Burgess, Shane C.

Publication type:

Article

Identification of cancer genes using a statistical framework for multiexperiment analysis of nondiscretized array CGH data.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. e13, doi. 10.1093/nar/gkm1143

By:

Klijn, Christiaan;
Holstege, Henne;
de Ridder, Jeroen;
Liu, Xiaoling;
Reinders, Marcel;
Jonkers, Jos;
Wessels, Lodewyk

Publication type:

Article

DNA polymerase kappa produces interrupted mutations and displays polar pausing within mononucleotide microsatellite sequences.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 688, doi. 10.1093/nar/gkm1089

By:

Hile, Suzanne E.;
Eckert, Kristin A.

Publication type:

Article

Studies on the mechanism of inhibition of bacterial ribonuclease P by aminoglycoside derivatives.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 697, doi. 10.1093/nar/gkm1088

By:

Kawamoto, Steven A.;
Sudhahar, Christopher G.;
Hatfield, Cynthia L.;
Sun, Jing;
Behrman, Edward J.;
Gopalan, Venkat

Publication type:

Article

Structure–function analysis of the RNA polymerase cleft loops elucidates initial transcription, DNA unwinding and RNA displacement.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 676, doi. 10.1093/nar/gkm1086

By:

Naji, Souad;
Bertero, Michela G.;
Spitalny, Patrizia;
Cramer, Patrick;
Thomm, Michael

Publication type:

Article

Use of a multi-thermal washer for DNA microarrays simplifies probe design and gives robust genotyping assays.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. e10, doi. 10.1093/nar/gkm1081

By:

Petersen, Jesper;
Poulsen, Lena;
Petronis, Sarunas;
Birgens, Henrik;
Dufva, Martin

Publication type:

Article

Epstein–Barr virus-encoded microRNA miR-BART2 down-regulates the viral DNA polymerase BALF5.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 666

By:

Barth, Stephanie;
Pfuhl, Thorsten;
Mamiani, Alfredo;
Ehses, Claudia;
Roemer, Klaus;
Kremmer, Elisabeth;
Jäker, Christoph;
Höck, Julia;
Meister, Gunter;
Grässer, Friedrich A.

Publication type:

Article

The dual control of TFIIB recruitment by NC2 is gene specific.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 539, doi. 10.1093/nar/gkm1078

By:

Masson, Patrick;
Leimgruber, Elisa;
Creton, Sandrine;
Collart, Martine A.

Publication type:

Article

Overlapping activator sequences determined for two oppositely oriented promoters in halophilic Archaea.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 598

By:

Bauer, Martina;
Marschaus, Larissa;
Reuff, Muriel;
Besche, Verena;
Sartorius-Neef, Simone;
Pfeifer, Felicitas

Publication type:

Article

Model-based variance-stabilizing transformation for Illumina microarray data.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. e11, doi. 10.1093/nar/gkm1075

By:

Lin, Simon M.;
Du, Pan;
Huber, Wolfgang;
Kibbe, Warren A.

Publication type:

Article

The yeast ribosome synthesis factor Emg1 is a novel member of the superfamily of alpha/beta knot fold methyltransferases.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 629

By:

Leulliot, Nicolas;
Bohnsack, Markus T.;
Graille, Marc;
Tollervey, David;
Van Tilbeurgh, Herman

Publication type:

Article

The interaction of mammalian mitochondrial translational initiation factor 3 with ribosomes: evolution of terminal extensions in IF3mt.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 589, doi. 10.1093/nar/gkm1072

By:

Haque, Md. Emdadul;
Grasso, Domenick;
Spremulli, Linda L.

Publication type:

Article

The RNA-dependent RNA polymerase essential for post-transcriptional gene silencing in Neurospora crassa interacts with replication protein A.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 532, doi. 10.1093/nar/gkm1071

By:

Nolan, Tony;
Cecere, Germano;
Mancone, Carmine;
Alonzi, Tonino;
Tripodi, Marco;
Catalanotto, Caterina;
Cogoni, Carlo

Publication type:

Article

Identifying foldable regions in protein sequence from the hydrophobic signal.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 578

By:

Pang, Chi N.I.;
Lin, Kuang;
Wouters, Merridee A.;
Heringa, Jaap;
George, Richard A.

Publication type:

Article

Magnesium-binding studies reveal fundamental differences between closely related RNA triphosphatases.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 451

By:

Soulière, Marie F.;
Perreault, Jean-Pierre;
Bisaillon, Martin

Publication type:

Article

Repair of DNA double-strand breaks within the (GAA•TTC)n sequence results in frequent deletion of the triplet-repeat sequence.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 489

By:

Pollard, Laura M.;
Bourn, Rebecka L.;
Bidichandani, Sanjay I.

Publication type:

Article

Structure of discontinuities in kinetoplast DNA-associated minicircles during S phase in Crithidia fasciculata.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 444

By:

Hines, Jane C.;
Ray, Dan S.

Publication type:

Article

Retinoic acid modulates chromatin to potentiate tumor necrosis factor alpha signaling on the DIF2 promoter.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 435

By:

Witcher, Michael;
Pettersson, Filippa;
Dupéré-Richer, Daphne;
Padovani, Alessandra;
Summers-Deluca, Leslie;
Baldwin, Albert S.;
Miller, Wilson H.

Publication type:

Article

Nε-Formylation of lysine is a widespread post-translational modification of nuclear proteins occurring at residues involved in regulation of chromatin function.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 570

By:

Wiśniewski, Jacek R.;
Zougman, Alexandre;
Mann, Matthias

Publication type:

Article

Transcription of Satellite III non-coding RNAs is a general stress response in human cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 423, doi. 10.1093/nar/gkm1056

By:

Valgardsdottir, Rut;
Chiodi, Ilaria;
Giordano, Manuela;
Rossi, Antonio;
Bazzini, Silvia;
Ghigna, Claudia;
Riva, Silvano;
Biamonti, Giuseppe

Publication type:

Article

Mechanisms of covalent self-assembly of the Azoarcus ribozyme from four fragment oligonucleotides.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 520

By:

Draper, Will E.;
Hayden, Eric J.;
Lehman, Niles

Publication type:

Article

Alternative splicing and protein structure evolution.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 550, doi. 10.1093/nar/gkm1054

By:

Birzele, Fabian;
Csaba, Gergely;
Zimmer, Ralf

Publication type:

Article

The Leu22Pro tumor-associated variant of DNA polymerase beta is dRP lyase deficient.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 411

By:

Dalal, Shibani;
Chikova, Anna;
Jaeger, Joachim;
Sweasy, Joann B.

Publication type:

Article

ATR-dependent pathways control hEXO1 stability in response to stalled forks.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 511, doi. 10.1093/nar/gkm1052

By:

El-Shemerly, Mahmoud;
Hess, Daniel;
Pyakurel, Aswin K.;
Moselhy, Said;
Ferrari, Stefano

Publication type:

Article

The formation pathway of tetramolecular G-quadruplexes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 477, doi. 10.1093/nar/gkm1050

By:

Bardin, Caroline;
Leroy, Jean Louis

Publication type:

Article

Chromatin-associated HMG-17 is a major regulator of homeodomain transcription factor activity modulated by Wnt/β-catenin signaling.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 462

By:

Amen, Melanie;
Espinoza, Herbert M.;
Cox, Carol;
Liang, Xiaowen;
Wang, Jianbo;
Link, Todd M. E.;
Brennan, Richard G.;
Martin, James F.;
Amendt, Brad A.

Publication type:

Article

Functional endogenous LINE-1 retrotransposons are expressed and mobilized in rat chloroleukemia cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 648, doi. 10.1093/nar/gkm1045

By:

Kirilyuk, Alexander;
Tolstonog, Genrich V.;
Damert, Annette;
Held, Ulrike;
Hahn, Silvia;
Löwer, Roswitha;
Buschmann, Christian;
Horn, Axel V.;
Traub, Peter;
Schumann, Gerald G.

Publication type:

Article

Interplay of ion binding and attraction in DNA condensed by multivalent cations.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 501

By:

Todd, Brian A.;
Rau, Donald C.

Publication type:

Article

DNA tape measurements of AraC.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 404

By:

Rodgers, Michael E.;
Schleif, Robert

Publication type:

Article

Regulating gene expression in human leukemia cells using light-activated oligodeoxynucleotides.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 559

By:

Tang, XinJing;
Swaminathan, Jyothishmathi;
Gewirtz, Alan M.;
Dmochowski, Ivan J.

Publication type:

Article

The N-terminal domain of TWINKLE contributes to single-stranded DNA binding and DNA helicase activities.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 393

By:

Farge, Géraldine;
Holmlund, Teresa;
Khvorostova, Julia;
Rofougaran, Reza;
Hofer, Anders;
Falkenberg, Maria

Publication type:

Article

Intracellular expression profiles measured by real-time PCR tomography in the Xenopus laevis oocyte.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 2, p. 387, doi. 10.1093/nar/gkm1024

By:

Sindelka, Radek;
Jonák, Jiri;
Hands, Rebecca;
Bustin, Stephen A.;
Kubista, Mikael

Publication type:

Article