Works matching IS 03051048 AND DT 2008 AND VI 36 AND IP 17

Results: 34

Evidence for an inositol hexakisphosphate-dependent role for Ku in mammalian nonhomologous end joining that is independent of its role in the DNA-dependent protein kinase.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5713, doi. 10.1093/nar/gkn572

By:

Cheung, Joyce C.Y.;
Salerno, Brenda;
Hanakahi, Les A.

Publication type:

Article

LINE-1 methylation patterns of different loci in normal and cancerous cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5704, doi. 10.1093/nar/gkn571

By:

Phokaew, Chureerat;
Kowudtitham, Supakit;
Subbalekha, Keskanya;
Shuangshoti, Shanop;
Mutirangura, Apiwat

Publication type:

Article

Chiral metallo-supramolecular complexes selectively recognize human telomeric G-quadruplex DNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5695, doi. 10.1093/nar/gkn569

By:

Yu, Haijia;
Wang, Xiaohui;
Fu, Manliang;
Ren, Jinsong;
Qu, Xiaogang

Publication type:

Article

Thr729 in human topoisomerase I modulates anti-cancer drug resistance by altering protein domain communications as suggested by molecular dynamics simulations.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5645, doi. 10.1093/nar/gkn558

By:

Chillemi, Giovanni;
D’Annessa, Ilda;
Fiorani, Paola;
Losasso, Carmen;
Benedetti, Piero;
Desideri, Alessandro

Publication type:

Article

A single mutation in the 729 residue modulates human DNA topoisomerase IB DNA binding and drug resistance.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5635, doi. 10.1093/nar/gkn557

By:

Losasso, Carmen;
Cretaio, Erica;
Fiorani, Paola;
D’Annessa, Ilda;
Chillemi, Giovanni;
Benedetti, Piero

Publication type:

Article

Evidence for lesion bypass by yeast replicative DNA polymerases during DNA damage.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5660, doi. 10.1093/nar/gkn555

By:

Sabouri, Nasim;
Viberg, Jörgen;
Goyal, Dinesh Kumar;
Johansson, Erik;
Chabes, Andrei

Publication type:

Article

Kinetics and thermodynamics of salt-dependent T7 gene 2.5 protein binding to single- and double-stranded DNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5668, doi. 10.1093/nar/gkn551

By:

Shokri, Leila;
Marintcheva, Boriana;
Eldib, Mootaz;
Hanke, Andreas;
Rouzina, Ioulia;
Williams, Mark C.

Publication type:

Article

γ-H2AX in recognition and signaling of DNA double-strand breaks in the context of chromatin.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5678, doi. 10.1093/nar/gkn550

By:

Kinner, Andrea;
Wu, Wenqi;
Staudt, Christian;
Iliakis, George

Publication type:

Article

Thermoplasma acidophilum Cdc6 protein stimulates MCM helicase activity by regulating its ATPase activity.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5602, doi. 10.1093/nar/gkn548

By:

Haugland, Gyri Teien;
Sakakibara, Nozomi;
Pey, Angel L.;
Rollor, Claire R.;
Birkeland, Nils-Kåre;
Kelman, Zvi

Publication type:

Article

A thermodynamic overview of naturally occurring intramolecular DNA quadruplexes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5610, doi. 10.1093/nar/gkn543

By:

Kumar, Niti;
Maiti, Souvik

Publication type:

Article

Non-conservative homologous recombination in human B lymphocytes is promoted by activation-induced cytidine deaminase and transcription.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5591, doi. 10.1093/nar/gkn542

By:

Mierau, Maren;
Drexler, Guido A.;
Kutzera, André;
Braunschmidt, Kerstin;
Ellwart, Joachim;
Eckardt-Schupp, Friederike;
Fritz, Eberhard;
Bachl, Jürgen;
Jungnickel, Berit

Publication type:

Article

Phylogenetic analysis of mRNA polyadenylation sites reveals a role of transposable elements in evolution of the 3′-end of genes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5581, doi. 10.1093/nar/gkn540

By:

Lee, Ju Youn;
Ji, Zhe;
Tian, Bin

Publication type:

Article

Clerocidin selectively modifies the gyrase-DNA gate to induce irreversible and reversible DNA damage.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5516, doi. 10.1093/nar/gkn539

By:

Pan, Xiao Su;
Dias, Miriam;
Palumbo, Manlio;
Fisher, L. Mark

Publication type:

Article

Activated transcription via mammalian amino acid response elements does not require enhanced recruitment of the Mediator complex.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5571, doi. 10.1093/nar/gkn538

By:

Thiaville, Michelle M.;
Dudenhausen, Elizabeth E.;
Awad, Keytam S.;
Gjymishka, Altin;
Zhong, Can;
Kilberg, Michael S.

Publication type:

Article

A mosaic of RNA binding and protein interaction motifs in a bifunctional mitochondrial tRNA import factor from Leishmania tropica.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5552, doi. 10.1093/nar/gkn536

By:

Home, Pratik;
Mukherjee, Saikat;
Adhya, Samit

Publication type:

Article

DNA replication timing is deterministic at the level of chromosomal domains but stochastic at the level of replicons in Xenopus egg extracts.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5623, doi. 10.1093/nar/gkn533

By:

Labit, Hélène;
Perewoska, Irène;
Germe, Thomas;
Hyrien, Olivier;
Marheineke, Kathrin

Publication type:

Article

Cell type differences in activity of the Streptomyces bacteriophage ϕC31 integrase.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5462, doi. 10.1093/nar/gkn532

By:

Maucksch, Christof;
Aneja, Manish Kumar;
Hennen, Elisabeth;
Bohla, Alexander;
Hoffmann, Florian;
Elfinger, Markus;
Rosenecker, Joseph;
Rudolph, Carsten

Publication type:

Article

A manganese-dependent ribozyme in the 3′-untranslated region of Xenopus Vg1 mRNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5530, doi. 10.1093/nar/gkn530

By:

Kolev, Nikolay G.;
Hartland, Emilia I.;
Huber, Paul W.

Publication type:

Article

Core flexibility of a truncated metazoan mitochondrial tRNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5472, doi. 10.1093/nar/gkn529

By:

Frazer-Abel, Ashley A.;
Hagerman, Paul J.

Publication type:

Article

The transcription factor Sox5 modulates Sox10 function during melanocyte development.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5427, doi. 10.1093/nar/gkn527

By:

Stolt, C. Claus;
Lommes, Petra;
Hillgärtner, Simone;
Wegner, Michael

Publication type:

Article

Thermodynamic analysis of 5′ and 3′ single- and 3′ double-nucleotide overhangs neighboring wobble terminal base pairs.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5652, doi. 10.1093/nar/gkn525

By:

Miller, Stacy;
Jones, Laura E.;
Giovannitti, Karen;
Piper, Dan;
Serra, Martin J.

Publication type:

Article

Viral AlkB proteins repair RNA damage by oxidative demethylation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5451, doi. 10.1093/nar/gkn519

By:

van den Born, Erwin;
Omelchenko, Marina V.;
Bekkelund, Anders;
Leihne, Vibeke;
Koonin, Eugene V.;
Dolja, Valerian V.;
Falnes, Pål Ø.

Publication type:

Article

Stability and kinetics of G-quadruplex structures.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5482, doi. 10.1093/nar/gkn517

By:

Lane, Andrew N.;
Chaires, J. Brad;
Gray, Robert D.;
Trent, John O.

Publication type:

Article

Biochemical analysis of the N-terminal domain of human RAD54B.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5441, doi. 10.1093/nar/gkn516

By:

Sarai, Naoyuki;
Kagawa, Wataru;
Fujikawa, Norie;
Saito, Kengo;
Hikiba, Juri;
Tanaka, Kozo;
Miyagawa, Kiyoshi;
Kurumizaka, Hitoshi;
Yokoyama, Shigeyuki

Publication type:

Article

Helical coherence of DNA in crystals and solution.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5540, doi. 10.1093/nar/gkn514

By:

Wynveen, Aaron;
Lee, Dominic J.;
Kornyshev, Alexei A.;
Leikin, Sergey

Publication type:

Article

Homogeneity and persistence of transgene expression by omitting antibiotic selection in cell line isolation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e111, doi. 10.1093/nar/gkn508

By:

Kaufman, Weimin L.;
Kocman, Ibrahim;
Agrawal, Vishal;
Rahn, Hans-Peter;
Besser, Daniel;
Gossen, Manfred

Publication type:

Article

Kinetics of charge transfer in DNA containing a mismatch.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. 5562, doi. 10.1093/nar/gkn505

By:

Osakada, Yasuko;
Kawai, Kiyohiko;
Fujitsuka, Mamoru;
Majima, Tetsuro

Publication type:

Article

Efficient transfer of two large secondary metabolite pathway gene clusters into heterologous hosts by transposition.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e113, doi. 10.1093/nar/gkn499

By:

Fu, Jun;
Wenzel, Silke C.;
Perlova, Olena;
Wang, Junping;
Gross, Frank;
Tang, Zhiru;
Yin, Yulong;
Stewart, A. Francis;
Müller, Rolf;
Zhang, Youming

Publication type:

Article

Analysis of copy number variation using quantitative interspecies competitive PCR.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e112, doi. 10.1093/nar/gkn495

By:

Williams, Nigel M.;
Williams, Hywel;
Majounie, Elisa;
Norton, Nadine;
Glaser, Beate;
Morris, Huw R.;
Owen, Michael J.;
O’Donovan, Michael C.

Publication type:

Article

Mix and measure fluorescence screening for selective quadruplex binders.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e106, doi. 10.1093/nar/gkn487

By:

Paramasivan, Sattanathan;
Bolton, Philip H.

Publication type:

Article

An approach of orthology detection from homologous sequences under minimum evolution.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e110, doi. 10.1093/nar/gkn485

By:

Kim, Kyung Mo;
Sung, Samsun;
Caetano-Anollés, Gustavo;
Han, Jae Yong;
Kim, Heebal

Publication type:

Article

De novo DNA synthesis using single molecule PCR.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e107, doi. 10.1093/nar/gkn457

By:

Yehezkel, Tuval Ben;
Linshiz, Gregory;
Buaron, Hen;
Kaplan, Shai;
Shabi, Uri;
Shapiro, Ehud

Publication type:

Article

A probabilistic generative model for GO enrichment analysis.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e109, doi. 10.1093/nar/gkn434

By:

Lu, Yong;
Rosenfeld, Roni;
Simon, Itamar;
Nau, Gerard J.;
Bar-Joseph, Ziv

Publication type:

Article

Consolidated strategy for the analysis of microarray spike-in data.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 17, p. e108, doi. 10.1093/nar/gkn430

By:

McCall, Matthew N.;
Irizarry, Rafael A.

Publication type:

Article