Works matching IS 03051048 AND DT 2008 AND VI 36 AND IP 15

Results: 35

Dynamics and consequences of DNA looping by the FokI restriction endonuclease.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5122, doi. 10.1093/nar/gkn565

By:

Catto, Lucy E.;
Bellamy, Stuart R. W.;
Retter, Susan E.;
Halford, Stephen E.

Publication type:

Article

Editorial-Publication Charges.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4821, doi. 10.1093/nar/gkn521

By:

Bird, Claire;
Fox, Keith;
Roberts, Rich

Publication type:

Article

The solution structure of the amino-terminal domain of human DNA polymerase ε subunit B is homologous to C-domains of AAA+ proteins.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5102, doi. 10.1093/nar/gkn497

By:

Nuutinen, Tarmo;
Tossavainen, Helena;
Fredriksson, Kai;
Pirilä, Päivi;
Permi, Perttu;
Pospiech, Helmut;
Syvaoja, Juhani E.

Publication type:

Article

The proofreading exonuclease subunit ε of Escherichia coli DNA polymerase III is tethered to the polymerase subunit α via a flexible linker.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5074, doi. 10.1093/nar/gkn489

By:

Ozawa, Kiyoshi;
Jergic, Slobodan;
Park, Ah Young;
Dixon, Nicholas E.;
Otting, Gottfried

Publication type:

Article

The splice variants of UBF differentially regulate RNA polymerase I transcription elongation in response to ERK phosphorylation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5093, doi. 10.1093/nar/gkn484

By:

Stefanovsky, Victor Y.;
Moss, Tom

Publication type:

Article

DNA organization by the apicoplast-targeted bacterial histone-like protein of Plasmodium falciparum.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5061, doi. 10.1093/nar/gkn483

By:

Ram, E. V. S. Raghu;
Naik, Rangeetha;
Ganguli, Munia;
Habib, Saman

Publication type:

Article

Cataloging and organizing p73 interactions in cell cycle arrest and apoptosis.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5033, doi. 10.1093/nar/gkn481

By:

Tozluoğlu, Melda;
Karaca, Ezgi;
Haliloglu, Turkan;
Nussinov, Ruth

Publication type:

Article

XRCC1 protects against the lethality of induced oxidative DNA damage in nondividing neural cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5111, doi. 10.1093/nar/gkn480

By:

Kulkarni, Avanti;
McNeill, Daniel R.;
Gleichmann, Marc;
Mattson, Mark P.;
Wilson, David M.

Publication type:

Article

A high-throughput percentage-of-binding strategy to measure binding energies in DNA–protein interactions: application to genome-scale site discovery.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4863, doi. 10.1093/nar/gkn477

By:

Wang, Xiaohu;
Gao, Haichun;
Shen, Yufeng;
Weinstock, George M.;
Zhou, Jizhong;
Palzkill, Timothy

Publication type:

Article

Imaging and characterizing influenza A virus mRNA transport in living cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4913, doi. 10.1093/nar/gkn475

By:

Wang, Wei;
Cui, Zong-Qiang;
Han, Han;
Zhang, Zhi-Ping;
Wei, Hong-Ping;
Zhou, Ya-Feng;
Chen, Ze;
Zhang, Xian-En

Publication type:

Article

Molecular dynamics of a κB DNA element: base flipping via cross-strand intercalative stacking in a microsecond-scale simulation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4941, doi. 10.1093/nar/gkn473

By:

Mura, Cameron;
McCammon, J. Andrew

Publication type:

Article

The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4902, doi. 10.1093/nar/gkn472

By:

Didiot, Marie-Cécile;
Tian, Zhaoxia;
Schaeffer, Céline;
Subramanian, Murugan;
Mandel, Jean-Louis;
Moine, Hervé

Publication type:

Article

RecR forms a ring-like tetramer that encircles dsDNA by forming a complex with RecF.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5013, doi. 10.1093/nar/gkn471

By:

Honda, Masayoshi;
Fujisawa, Tetsuro;
Shibata, Takehiko;
Mikawa, Tsutomu

Publication type:

Article

Trans-natural antisense transcripts including noncoding RNAs in 10 species: implications for expression regulation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4833, doi. 10.1093/nar/gkn470

By:

Li, Jiong-Tang;
Zhang, Yong;
Kong, Lei;
Liu, Qing-Rong;
Wei, Liping

Publication type:

Article

60S ribosomal subunit assembly dynamics defined by semi-quantitative mass spectrometry of purified complexes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4988, doi. 10.1093/nar/gkn469

By:

Lebreton, Alice;
Rousselle, Jean-Claude;
Lenormand, Pascal;
Namane, Abdelkader;
Jacquier, Alain;
Fromont-Racine, Micheline;
Saveanu, Cosmin

Publication type:

Article

WRN Exonuclease activity is blocked by specific oxidatively induced base lesions positioned in either DNA strand.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4975, doi. 10.1093/nar/gkn468

By:

Bukowy, Zuzanna;
Harrigan, Jeanine A.;
Ramsden, Dale A.;
Tudek, Barbara;
Bohr, Vilhelm A.;
Stevnsner, Tinna

Publication type:

Article

DNA supercoiling inhibits DNA knotting.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4956, doi. 10.1093/nar/gkn467

By:

Burnier, Yannis;
Dorier, Julien;
Stasiak, Andrzej

Publication type:

Article

Human topoisomerase IIα uses a two-metal-ion mechanism for DNA cleavage.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4883, doi. 10.1093/nar/gkn466

By:

Deweese, Joseph E.;
Burgin, Alex B.;
Osheroff, Neil

Publication type:

Article

Crystal engineering of HIV-1 reverse transcriptase for structure-based drug design.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5083, doi. 10.1093/nar/gkn464

By:

Bauman, Joseph D.;
Das, Kalyan;
Ho, William C.;
Baweja, Mukta;
Himmel, Daniel M.;
Clark, Arthur D.;
Oren, Deena A.;
Boyer, Paul L.;
Hughes, Stephen H.;
Shatkin, Aaron J.;
Arnold, Eddy

Publication type:

Article

Tissue-specific splicing factor gene expression signatures.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4823, doi. 10.1093/nar/gkn463

By:

Grosso, Ana Rita;
Gomes, Anita Q.;
Barbosa-Morais, Nuno L.;
Caldeira, Sandra;
Thorne, Natalie P.;
Grech, Godfrey;
von Lindern, Marieke;
Carmo-Fonseca, Maria

Publication type:

Article

A unique conformation of the anticodon stem-loop is associated with the capacity of tRNAfMet to initiate protein synthesis.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4894, doi. 10.1093/nar/gkn462

By:

Barraud, Pierre;
Schmitt, Emmanuelle;
Mechulam, Yves;
Dardel, Frédéric;
Tisné, Carine

Publication type:

Article

Assembling of G-strands into novel tetra-molecular parallel G4-DNA nanostructures using avidin–biotin recognition.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5050, doi. 10.1093/nar/gkn459

By:

Borovok, Natalia;
Iram, Natalie;
Zikich, Dragoslav;
Ghabboun, Jamal;
Livshits, Gideon I.;
Porath, Danny;
Kotlyar, Alexander B.

Publication type:

Article

DNA repair of clustered lesions in mammalian cells: involvement of non-homologous end-joining.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4872, doi. 10.1093/nar/gkn450

By:

Malyarchuk, Svitlana;
Castore, Reneau;
Harrison, Lynn

Publication type:

Article

Chromatin profiling across the human tumour necrosis factor gene locus reveals a complex, cell type-specific landscape with novel regulatory elements.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4845, doi. 10.1093/nar/gkn444

By:

Taylor, Jennifer M.;
Wicks, Kate;
Vandiedonck, Claire;
Knight, Julian C.

Publication type:

Article

Srs2 removes deadly recombination intermediates independently of its interaction with SUMO-modified PCNA.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4964, doi. 10.1093/nar/gkn441

By:

Le Breton, Cyrille;
Dupaigne, Pauline;
Robert, Thomas;
Le Cam, Eric;
Gangloff, Serge;
Fabre, Francis;
Veaute, Xavier

Publication type:

Article

The crystal structure of Pyrococcus abyssi tRNA (uracil-54, C5)-methyltransferase provides insights into its tRNA specificity.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 4929, doi. 10.1093/nar/gkn437

By:

Walbott, Hélène;
Leulliot, Nicolas;
Grosjean, Henri;
Golinelli-Pimpaneau, Béatrice

Publication type:

Article

Electrical detection of the temperature induced melting transition of a DNA hairpin covalently attached to gold interdigitated microelectrodes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e98, doi. 10.1093/nar/gkn436

By:

Brewood, Greg P.;
Rangineni, Yaswanth;
Fish, Daniel J.;
Bhandiwad, Ashwini S.;
Evans, David R.;
Solanki, Raj;
Benight, Albert S.

Publication type:

Article

Functional studies on transfected cell microarray analysed by linear regression modelling.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e97, doi. 10.1093/nar/gkn428

By:

Fjeldbo, Christina Sæten;
Misund, Kristine;
Günther, Clara-Cecilie;
Langaas, Mette;
Steigedal, Tonje Strømmen;
Thommesen, Liv;
Lægreid, Astrid;
Bruland, Torunn

Publication type:

Article

A functional selection of viral genetic elements in cultured cells to identify hepatitis C virus RNA translation inhibitors†.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e95, doi. 10.1093/nar/gkn427

By:

Jaffrelo, Loic;
Chabas, Sandrine;
Reigadas, Sandrine;
Pflieger, Aude;
Wychowski, Czeslaw;
Rumi, Julie;
Ventura, Michel;
Toulmé, Jean-Jacques;
Staedel, Cathy

Publication type:

Article

Multimolecular complex of Par-4 and E2F1 binding to Smac promoter contributes to glutamate-induced apoptosis in human- bone mesenchymal stem cells.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5021, doi. 10.1093/nar/gkn426

By:

Lu, Chao;
Chen, Jie-Qing;
Zhou, Guo-Ping;
Wu, Sheng-Hua;
Guan, Ya-Fei;
Yuan, Chuan-Shun

Publication type:

Article

Rational vector design and multi-pathway modulation of HEK 293E cells yield recombinant antibody titers exceeding 1 g/l by transient transfection under serum-free conditions.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e96, doi. 10.1093/nar/gkn423

By:

Backliwal, Gaurav;
Hildinger, Markus;
Chenuet, Sebastien;
Wulhfard, Sarah;
De Jesus, Maria;
Wurm, Florian M.

Publication type:

Article

Tetraalkylammonium derivatives as real-time PCR enhancers and stabilizers of the qPCR mixtures containing SYBR Green I.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e93, doi. 10.1093/nar/gkn421

By:

Shaik, Gouse M.;
Dráberová, Lubica;
Dráber, Peter;
Boubelík, Michael;
Dráber, Petr

Publication type:

Article

Chum-RNA allows preparation of a high-quality cDNA library from a single-cell quantity of mRNA without PCR amplification.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e92, doi. 10.1093/nar/gkn420

By:

Tougan, Takahiro;
Okuzaki, Daisuke;
Nojima, Hiroshi

Publication type:

Article

Selective recognition of pyrimidine–pyrimidine DNA mismatches by distance-constrained macrocyclic bis-intercalators.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. 5000, doi. 10.1093/nar/gkn392

By:

Bahr, Matthias;
Gabelica, Valérie;
Granzhan, Anton;
Teulade-Fichou, Marie-Paule;
Weinhold, Elmar

Publication type:

Article

SNP-specific extraction of haplotype-resolved targeted genomic regions.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 15, p. e94, doi. 10.1093/nar/gkn345

By:

Dapprich, Johannes;
Ferriola, Deborah;
Magira, Eleni E.;
Kunkel, Mark;
Monos, Dimitri

Publication type:

Article