Works matching IS 03051048 AND DT 2008 AND VI 36 AND IP 14

Results: 35

The conserved N-terminal basic residues and zinc-finger motifs of HIV-1 nucleocapsid restrict the viral cDNA synthesis during virus formation and maturation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4745, doi. 10.1093/nar/gkn474

By:

Didierlaurent, Ludovic;
Houzet, Laurent;
Morichaud, Zakia;
Darlix, Jean-Luc;
Mougel, Marylène

Publication type:

Article

Inhibition of Mg2+ binding and DNA religation by bacterial topoisomerase I via introduction of an additional positive charge into the active site region.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4788, doi. 10.1093/nar/gkn460

By:

Sorokin, Elena P.;
Cheng, Bokun;
Rathi, Siddarth;
Aedo, Sandra J.;
Abrenica, Maria V.;
Tse-Dinh, Yuk-Ching

Publication type:

Article

Structural analysis of the genetic switch that regulates the expression of restriction-modification genes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4778, doi. 10.1093/nar/gkn448

By:

McGeehan, John E.;
Streeter, Simon D.;
Thresh, Sarah -J.;
Ball, Neil;
Ravelli, Raimond B. G.;
Kneale, G. Geoff

Publication type:

Article

RNA secondary structure of the feline immunodeficiency virus 5′UTR and Gag coding region.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4653, doi. 10.1093/nar/gkn447

By:

James, Laurie;
Sargueil, Bruno

Publication type:

Article

The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4754, doi. 10.1093/nar/gkn458

By:

Nagata, Takashi;
Suzuki, Sakura;
Endo, Ryuta;
Shirouzu, Mikako;
Terada, Takaho;
Inoue, Makoto;
Kigawa, Takanori;
Kobayashi, Naohiro;
Güntert, Peter;
Tanaka, Akiko;
Hayashizaki, Yoshihide;
Muto, Yutaka;
Yokoyama, Shigeyuki

Publication type:

Article

Human DDX3 functions in translation and interacts with the translation initiation factor eIF3.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4708, doi. 10.1093/nar/gkn454

By:

Lee, Chung-Sheng;
Dias, Anusha P.;
Jedrychowski, Mark;
Patel, Arvind H.;
Hsu, Jeanne L.;
Reed, Robin

Publication type:

Article

Phosphorylation of the carboxy-terminal domain of histone H1: effects on secondary structure and DNA condensation.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4719, doi. 10.1093/nar/gkn440

By:

Roque, Alicia;
Ponte, Inma;
Arrondo, José Luis R.;
Suau, Pedro

Publication type:

Article

Efficient transfer of base changes from a vector to the rice genome by homologous recombination: involvement of heteroduplex formation and mismatch correction.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4727, doi. 10.1093/nar/gkn451

By:

Johzuka-Hisatomi, Yasuyo;
Terada, Rie;
Iida, Shigeru

Publication type:

Article

Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector l-glutamine: implications of effector binding in molecular association and DNA binding.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4808, doi. 10.1093/nar/gkn456

By:

Kumarevel, Thirumananseri;
Nakano, Noboru;
Ponnuraj, Karthe;
Gopinath, Subash C. B.;
Sakamoto, Keiko;
Shinkai, Akeo;
Kumar, Penmetcha K. R.;
Yokoyama, Shigeyuki

Publication type:

Article

DNA methylation analysis by digital bisulfite genomic sequencing and digital MethyLight.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4689, doi. 10.1093/nar/gkn455

By:

Weisenberger, Daniel J.;
Trinh, Binh N.;
Campan, Mihaela;
Sharma, Shikhar;
Long, Tiffany I.;
Ananthnarayan, Suchitra;
Liang, Gangning;
Esteva, Francisco J.;
Hortobagyi, Gabriel N.;
McCormick, Frank;
Jones, Peter A.;
Laird, Peter W.

Publication type:

Article

Partial reconstitution of DNA large loop repair with purified proteins from Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4699, doi. 10.1093/nar/gkn446

By:

Sommer, Debbie;
Stith, Carrie M.;
Burgers, Peter M. J.;
Lahue, Robert S.

Publication type:

Article

Dissecting direct and indirect readout of cAMP receptor protein DNA binding using an inosine and 2,6-diaminopurine in vitro selection system.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4797, doi. 10.1093/nar/gkn452

By:

Lindemose, Søren;
Nielsen, Peter Eigil;
Møllegaard, Niels Erik

Publication type:

Article

Processing of triplex-directed psoralen DNA interstrand crosslinks by recombination mechanisms.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4680, doi. 10.1093/nar/gkn438

By:

Liu, Yaobin;
Nairn, Rodney S.;
Vasquez, Karen M.

Publication type:

Article

Hit selection with false discovery rate control in genome-scale RNAi screens.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4667, doi. 10.1093/nar/gkn435

By:

Zhang, Xiaohua Douglas;
Kuan, Pei Fen;
Ferrer, Marc;
Shu, Xiaohua;
Liu, Yingxue C.;
Gates, Adam T.;
Kunapuli, Priya;
Stec, Erica M.;
Xu, Min;
Marine, Shane D.;
Holder, Daniel J.;
Strulovici, Berta;
Heyse, Joseph F.;
Espeseth, Amy S.

Publication type:

Article

Revealing unique properties of the ribosome using a network based analysis.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4641, doi. 10.1093/nar/gkn433

By:

David-Eden, Hilda;
Mandel-Gutfreund, Yael

Publication type:

Article

Development of an isoform-specific gene suppression system: the study of the human Pax-5B transcriptional element.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4609, doi. 10.1093/nar/gkn432

By:

Robichaud, Gilles A.;
Perreault, Jean-Pierre;
Ouellette, Rodney J.

Publication type:

Article

MicroRNA regulation and the variability of human cortical gene expression.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4621, doi. 10.1093/nar/gkn431

By:

Zhang, Rui;
Su, Bing

Publication type:

Article

Spatial configuration of the chicken α-globin gene domain: immature and active chromatin hubs.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4629, doi. 10.1093/nar/gkn429

By:

Gavrilov, Alexey A.;
Razin, Sergey V.

Publication type:

Article

Features of 80S mammalian ribosome and its subunits.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4736, doi. 10.1093/nar/gkn424

By:

Budkevich, Tatyana V.;
El'skaya, Anna V.;
Nierhaus, Knud H.

Publication type:

Article

An intrastrand three-DNA-base interaction is a key specificity determinant of F transfer initiation and of F TraI relaxase DNA recognition and cleavage.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4565, doi. 10.1093/nar/gkn422

By:

Hekman, Katherine;
Guja, Kip;
Larkin, Chris;
Schildbach, Joel F.

Publication type:

Article

Dissection of reverse gyrase activities: insight into the evolution of a thermostable molecular machine†.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4587, doi. 10.1093/nar/gkn418

By:

Valenti, Anna;
Perugino, Giuseppe;
D’Amaro, Anna;
Cacace, Andrea;
Napoli, Alessandra;
Rossi, Mosè;
Ciaramella, Maria

Publication type:

Article

Light activation of transcription: photocaging of nucleotides for control over RNA polymerization.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e90, doi. 10.1093/nar/gkn415

By:

Pinheiro, André Vidal;
Baptista, Pedro;
Lima, João Carlos

Publication type:

Article

A new method for robust quantitative and qualitative analysis of real-time PCR.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e91, doi. 10.1093/nar/gkn408

By:

Shain, Eric B.;
Clemens, John M.

Publication type:

Article

The RNA-binding protein TbDRBD3 regulates the stability of a specific subset of mRNAs in trypanosomes.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4573

By:

Estévez, Antonio M.

Publication type:

Article

Multiple segmental and selective isotope labeling of large RNA for NMR structural studies.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e89, doi. 10.1093/nar/gkn397

By:

Nelissen, Frank H. T.;
van Gammeren, Adriaan J.;
Tessari, Marco;
Girard, Frederic C.;
Heus, Hans A.;
Wijmenga, Sybren S.

Publication type:

Article

In vitro selection of small RNA-cleaving deoxyribozymes that cleave pyrimidine–pyrimidine junctions.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4768, doi. 10.1093/nar/gkn396

By:

Schlosser, Kenny;
Gu, Jimmy;
Lam, Jeffrey C. F.;
Li, Yingfu

Publication type:

Article

Highly sensitive and specific microRNA expression profiling using BeadArray technology.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e87, doi. 10.1093/nar/gkn387

By:

Chen, Jing;
Lozach, Jean;
Garcia, Eliza Wickham;
Barnes, Bret;
Luo, Shujun;
Mikoulitch, Ivan;
Zhou, Lixin;
Schroth, Gary;
Fan, Jian-Bing

Publication type:

Article

Efficient delivery of RNA Interference to peripheral neurons in vivo using herpes simplex virus.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e86, doi. 10.1093/nar/gkn371

By:

Anesti, Anna-Maria;
Peeters, Pieter J.;
Royaux, Ines;
Coffin, Robert S.

Publication type:

Article

A protein–DNA docking benchmark.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e88, doi. 10.1093/nar/gkn386

By:

van Dijk, Marc;
Bonvin, Alexandre M. J. J.

Publication type:

Article

Intramolecularly folded G-quadruplex and i-motif structures in the proximal promoter of the vascular endothelial growth factor gene.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4598, doi. 10.1093/nar/gkn380

By:

Guo, Kexiao;
Gokhale, Vijay;
Hurley, Laurence H.;
Sun, Daekyu

Publication type:

Article

Survey of group I and group II introns in 29 sequenced genomes of the Bacillus cereus group: insights into their spread and evolution.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4529, doi. 10.1093/nar/gkn372

By:

Tourasse, Nicolas J.;
Kolstø, Anne-Brit

Publication type:

Article

Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4549, doi. 10.1093/nar/gkn382

By:

Wederell, Elizabeth D.;
Bilenky, Mikhail;
Cullum, Rebecca;
Thiessen, Nina;
Dagpinar, Melis;
Delaney, Allen;
Varhol, Richard;
Zhao, YongJun;
Zeng, Thomas;
Bernier, Bridget;
Ingham, Matthew;
Hirst, Martin;
Robertson, Gordon;
Marra, Marco A.;
Jones, Steven;
Hoodless, Pamela A.

Publication type:

Article

Rapid and efficient construction of markerless deletions in the Escherichia coli genome.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e84

By:

Yu, Byung Jo;
Kang, Kui Hyeon;
Lee, Jun Hyoung;
Sung, Bong Hyun;
Kim, Mi Sun;
Kim, Sun Chang

Publication type:

Article

Real-time detection of Fe·EDTA/H2O2-induced DNA cleavage by linear dichroism.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. e85, doi. 10.1093/nar/gkn370

By:

Wang, Wei;
Lee, Gil Jun;
Jang, Kyeung Joo;
Cho, Tae Sub;
Kim, Seog K.

Publication type:

Article

The role of transcriptional activator GATA-1 at human β-globin HS2.

Published in:

Nucleic Acids Research, 2008, v. 36, n. 14, p. 4521, doi. 10.1093/nar/gkn368

By:

Cho, Youngran;
Song, Sang-Hyun;
Lee, Jong Joo;
Choi, Narae;
Kim, Chul Geun;
Dean, Ann;
Kim, AeRi

Publication type:

Article