Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 8

Results: 42

Real-time PCR mapping of DNaseI-hypersensitive sites using a novel ligation-mediated amplification technique.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e56, doi. 10.1093/nar/gkm108

By:

Follows, George A.;
Janes, Mary E.;
Vallier, Ludovic;
Green, Anthony R.;
Gottgens, Berthold

Publication type:

Article

Nitric oxide controls nuclear export of APE1/Ref-1 through S-nitrosation of Cysteines 93 and 310.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2522

By:

Qu, Jing;
Liu, Guang-Hui;
Huang, Bo;
Chen, Chang

Publication type:

Article

RNA helicase A interacts with divergent lymphotropic retroviruses and promotes translation of human T-cell leukemia virus type 1.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2629, doi. 10.1093/nar/gkm124

By:

Bolinger, Cheryl;
Yilmaz, Alper;
Hartman, Tiffiney Roberts;
Kovacic, Melinda Butsch;
Fernandez, Soledad;
Ye, Jianxin;
Forget, Mary;
Green, Patrick L.;
Boris-Lawrie, Kathleen

Publication type:

Article

The leader region of Laminin B1 mRNA confers cap-independent translation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2473, doi. 10.1093/nar/gkm096

By:

Petz, Michaela;
Kozina, Daniela;
Huber, Heidemarie;
Siwiec, Tanja;
Seipelt, Joachim;
Sommergruber, Wolfgang;
Mikulits, Wolfgang

Publication type:

Article

Quadruplex ligands may act as molecular chaperones for tetramolecular quadruplex formation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2483, doi. 10.1093/nar/gkm098

By:

Cian, Anne De;
Mergny, Jean-Louis

Publication type:

Article

Selective use of multiple vitamin D response elements underlies the 1 α,25-dihydroxyvitamin D3-mediated negative regulation of the human CYP27B1 gene.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2734, doi. 10.1093/nar/gkm179

By:

Turunen, Mikko M.;
Dunlop, Thomas W.;
Carlberg, Carsten;
Väisänen, Sami

Publication type:

Article

High-resolution AFM imaging of single-stranded DNA-binding (SSB) protein—DNA complexes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e58, doi. 10.1093/nar/gkm147

By:

Hamon, Loïc;
Pastré, David;
Dupaigne, Pauline;
Breton, Cyrille Le;
Cam, Eric Le;
Piétrement, Olivier

Publication type:

Article

Idefix insulator activity can be modulated by nearby regulatory elements.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2661, doi. 10.1093/nar/gkm140

By:

Brasset, E.;
Bantignies, F.;
Court, F.;
Cheresiz, S.;
Conte, C.;
Vaury, C.

Publication type:

Article

Identification and characterization of OGG1 mutations in patients with Alzheimer's disease.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2759, doi. 10.1093/nar/gkm189

By:

Mao, Guogen;
Pan, Xiaoyu;
Zhu, Bei-Bei;
Zhang, Yanbin;
Yuan, Fenghua;
Huang, Jian;
Lovell, Mark A.;
Lee, Maxwell P.;
Markesbery, William R.;
Li, Guo-Min;
Gu, Liya

Publication type:

Article

NXF2 is involved in cytoplasmic mRNA dynamics through interactions with motor proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2513, doi. 10.1093/nar/gkm125

By:

Takano, Keizo;
Miki, Takashi;
Katahira, Jun;
Yoneda, Yoshihiro

Publication type:

Article

C1D and hMtr4p associate with the human exosome subunit PM/Scl-100 and are involved in pre-rRNA processing.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2564, doi. 10.1093/nar/gkm082

By:

Schilders, Geurt;
van Dijk, Erwin;
Pruijn, Ger J.M.

Publication type:

Article

Multiplexing siRNAs to compress RNAi-based screen size in human cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e57, doi. 10.1093/nar/gkm141

By:

Martin, Scott E.;
Jones, Tamara L.;
Thomas, Cheryl L.;
Lorenzi, Philip L.;
Nguyen, Dac A.;
Runfola, Timothy;
Gunsior, Michele;
Weinstein, John N.;
Goldsmith, Paul K.;
Lader, Eric;
Huppi, Konrad;
Caplen, Natasha J.

Publication type:

Article

Stimulation of fission yeast and mouse Hop2-Mnd1 of the Dmc1 and Rad51 recombinases.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2719, doi. 10.1093/nar/gkm174

By:

Ploquin, Mickaël;
Petukhova, Galina V.;
Morneau, Dany;
Déry, Ugo;
Bransi, Ali;
Stasiak, Andrzej;
Camerini-Otero, R. Daniel;
Masson, Jean-Yves

Publication type:

Article

The recombination-associated protein RdgC adopts a novel toroidal architecture for DNA binding.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2671, doi. 10.1093/nar/gkm144

By:

Ha, Jun Yong;
Kim, Hye Kyong;
Kim, Do Jin;
Kim, Kyoung Hoon;
Oh, Sung Jin;
Lee, Hyung Ho;
Yoon, Hye Jin;
Song, Hyun Kyu;
Suh, Se Won

Publication type:

Article

Thermodynamics and NMR studies on Duck, Heron and Human HBV encapsidation signals.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2800, doi. 10.1093/nar/gkm131

By:

Girard, Frederic C.;
Ottink, Otmar M.;
Ampt, Kirsten A.M.;
Tessari, Marco;
Wijmenga, Sybren S.

Publication type:

Article

Polyadenylation of a functional mRNA controls gene expression in Escherichia coli.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2494, doi. 10.1093/nar/gkm120

By:

Joanny, Géraldine;
Derout, Jacques Le;
Bréchemier-Baey, Dominique;
Labas, Valérie;
Vinh, Joelle;
Régnier, Philippe;
Hajnsdorf, Eliane

Publication type:

Article

R.KpnI, an HNH superfamily REase, exhibits differential discrimination at non-canonical sequences in the presence of Ca2+ and Mg2+.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2777, doi. 10.1093/nar/gkm114

By:

Saravanan, Matheshwaran;
Vasu, Kommireddy;
Kanakaraj, Radhakrishnan;
Rao, Desirazu N.;
Nagaraja, Valakunja

Publication type:

Article

Mapping biomedical concepts onto the human genome by mining literature on chromosomal aberrations.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2533, doi. 10.1093/nar/gkm054

By:

Van Vooren, Steven;
Thienpont, Bernard;
Menten, Björn;
Speleman, Frank;
Moor, Bart De;
Vermeesch, Joris;
Moreau, Yves

Publication type:

Article

DNA structural deformations in the interaction of the controller protein C.AhdI with its operator sequence.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2643, doi. 10.1093/nar/gkm129

By:

Papapanagiotou, I.;
Streeter, S. D.;
Cary, P. D.;
Kneale, G. G.

Publication type:

Article

Parallel gene synthesis in a microfluidic device.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e61, doi. 10.1093/nar/gkm121

By:

Kong, David S.;
Carr, Peter A.;
Chen, Lu;
Zhang, Shuguang;
Jacobson, Joseph M.

Publication type:

Article

Biochemical and cellular characteristics of the 3′ → 5′ exonuclease TREX2.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2682, doi. 10.1093/nar/gkm151

By:

Chen, Ming-Jiu;
Ma, Sheng-Mei;
Dumitrache, Lavinia C.;
Hasty, Paul

Publication type:

Article

Bidirectional transcription is an inherent feature of Giardia lamblia promoters and contributes to an abundance of sterile antisense transcripts throughout the genome.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2544, doi. 10.1093/nar/gkm105

By:

Teodorovic, Smilja;
Walls, Colleen D.;
Elmendorf, Heidi G.

Publication type:

Article

Topoisomerase II, scaffold component, promotes chromatin compaction in vitro in a linker-histone H1-dependent manner.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2787, doi. 10.1093/nar/gkm116

By:

Hizume, Kohji;
Araki, Sumiko;
Yoshikawa, Kenichi;
Takeyasu, Kunio

Publication type:

Article

Nuclear localization of human DNA mismatch repair protein exonuclease 1 (hEXO1).

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2609, doi. 10.1093/nar/gkl1166

By:

Knudsen, Nina Østergaard;
Nielsen, Finn Cilius;
Vinther, Lena;
Bertelsen, Ronni;
Holten-Andersen, Steen;
Liberti, Sascha Emilie;
Hofstra, Robert;
Kooi, Krista;
Rasmussen, Lene Juel

Publication type:

Article

A tractable method for simultaneous modifications to the head and tail of bacteriophage lambda and its application to enhancing phage-mediated gene delivery.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e59, doi. 10.1093/nar/gkm146

By:

Zanghi, Christine N.;
Sapinoro, Ramil;
Bradel-Tretheway, Birgit;
Dewhurst, Stephen

Publication type:

Article

HEXIM1 is a promiscuous double-stranded RNA-binding protein and interacts with RNAs in addition to 7SK in cultured cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2503, doi. 10.1093/nar/gkm150

By:

Li, Qintong;
Cooper, Jeffrey J.;
Altwerger, Gary H.;
Feldkamp, Michael D.;
Shea, Madeline A.;
Price, David H.

Publication type:

Article

HIV controls the selective packaging of genomic, spliced viral and cellular RNAs into virions through different mechanisms.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2695, doi. 10.1093/nar/gkm153

By:

Houzet, Laurent;
Paillart, Jean Christophe;
Smagulova, Fatima;
Maurel, Stephan;
Morichaud, Zakia;
Marquet, Roland;
Mougel, Marylène

Publication type:

Article

Human sat III and Drosophila hsr omega transcripts: a common paradigm for regulation of nuclear RNA processing in stressed cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2812, doi. 10.1093/nar/gkm128

By:

Jolly, C.;
Lakhotia, S. C.

Publication type:

Article

Base-flipping dynamics in a DNA hairpin processing reaction.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2584, doi. 10.1093/nar/gkm186

By:

Bischerour, Julien;
Chalmers, Ronald

Publication type:

Article

The checkpoint clamp, Rad9-Rad1-Hus1 complex, preferentially stimulates the activity of apurinic/apyrimidinic endonuclease 1 and DNA polymerase β in long patch base excision repair.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2596, doi. 10.1093/nar/gkl1139

By:

Gembka, Agnieszka;
Toueille, Magali;
Smirnova, Ekaterina;
Poltz, Rainer;
Ferrari, Elena;
Villani, Giuseppe;
Hübscher, Ulrich

Publication type:

Article

NMR evaluation of ammonium ion movement within a unimolecular G-quadruplex in solution.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2554, doi. 10.1093/nar/gkm138

By:

Podbevšek, Peter;
Hud, Nicholas V.;
Plavec, Janez

Publication type:

Article

Comparison of approaches for rational siRNA design leading to a new efficient and transparent method.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e63, doi. 10.1093/nar/gkm088

By:

Matveeva, Olga;
Nechipurenko, Yury;
Rossi, Leo;
Moore, Barry;
Sætrom, Pål;
Ogurtsov, Aleksey Y.;
Atkins, John F.;
Shabalina, Svetlana A.

Publication type:

Article

A recombineering based approach for high-throughput conditional knockout targeting vector construction.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e64, doi. 10.1093/nar/gkm163

By:

Chan, Waiin;
Costantino, Nina;
Li, Ruixue;
Lee, Song Choon;
Su, Qin;
Melvin, David;
Court, Donald L.;
Liu, Pentao

Publication type:

Article

The human checkpoint sensor Rad9–Rad1–Hus1 interacts with and stimulates NEIL1 glycosylase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2463, doi. 10.1093/nar/gkm075

By:

Guan, Xin;
Bai, Haibo;
Shi, Guoli;
Theriot, Corey A.;
Hazra, Tapas K.;
Mitra, Sankar;
Lu, A-Lien

Publication type:

Article

Concentration-dependent organization of DNA by the dinoflagellate histone-like protein HCc3.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2573, doi. 10.1093/nar/gkm165

By:

Chan, Yuk-Hang;
Wong, Joseph T. Y.

Publication type:

Article

DNA sequencing by MALDI-TOF MS using alkali cleavage of RNA/DNA chimeras.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e62, doi. 10.1093/nar/gkm056

By:

Mauger, Florence;
Bauer, Keith;
Calloway, Cassandra D.;
Semhoun, Jérémy;
Nishimoto, Tetsuya;
Myers, Thomas W.;
Gelfand, David H.;
Gut, Ivo G.

Publication type:

Article

Crystal structure of the third KH domain of human poly(C)-binding protein-2 in complex with a C-rich strand of human telomeric DNA at 1.6 Å resolution.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2651, doi. 10.1093/nar/gkm139

By:

Fenn, Sebastian;
Du, Zhihua;
Lee, John K.;
Tjhen, Richard;
Stroud, Robert M.;
James, Thomas L.

Publication type:

Article

Flow cytometric analysis of DNA binding and cleavage by cell surface-displayed homing endonucleases.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2748, doi. 10.1093/nar/gkm182

By:

Volná, Petra;
Jarjour, Jordan;
Baxter, Sarah;
Roffler, Steve R.;
Monnat, Raymond J.;
Stoddard, Barry L.;
Scharenberg, Andrew M.

Publication type:

Article

Carbodiimide-mediated cross-linking of RNA to nylon membranes improves the detection of siRNA, miRNA and piRNA by northern blot.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. e60, doi. 10.1093/nar/gkm112

By:

Pall, Gurman Singh;
Codony-Servat, Carles;
Byrne, Jane;
Ritchie, Leigh;
Hamilton, Andrew

Publication type:

Article

Optimization and characterization of tRNA-shRNA expression constructs.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2620, doi. 10.1093/nar/gkm103

By:

Scherer, Lisa J.;
Frank, Richard;
Rossi, John J.

Publication type:

Article

Novel DNA-binding element within the C-terminal extension of the nuclear receptor DNA-binding domain.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2705

By:

Jakób, Michał;
Kołodziejczyk, Robert;
Orłowski, Marek;
Krzywda, Szymon;
Kowalska, Agnieszka;
Dutko-Gwóźdź, Joanna;
Gwóźdź, Tomasz;
Kochman, Marian;
Jaskólski, Mariusz;
Ożyhar, Andrzej

Publication type:

Article

A promoting role of androgen receptor in androgen-sensitive and -insensitive prostate cancer cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 8, p. 2767, doi. 10.1093/nar/gkm198

By:

Li, Tzu-Huey;
Zhao, Hongjuan;
Peng, Yue;
Beliakoff, Jason;
Brooks, James D.;
Sun, Zijie

Publication type:

Article