Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 6

Results: 41

Cancer-derived p53 mutants suppress p53-target gene expression—potential mechanism for gain of function of mutant p53.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2093, doi. 10.1093/nar/gkm099

By:

Vikhanskaya, Faina;
Lee, Ming Kei;
Mazzoletti, Marco;
Broggini, Massimo;
Sabapathy, Kanaga

Publication type:

Article

Codon conservation in the influenza A virus genome defines RNA packaging signals.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1897, doi. 10.1093/nar/gkm087

By:

Gog, Julia R.;
Afonso, Emmanuel Dos Santos;
Dalton, Rosa M.;
Leclercq, India;
Tiley, Laurence;
Elton, Debra;
von Kirchbach, Johann C.;
Naffakh, Nadia;
Escriou, Nicolas;
Digard, Paul

Publication type:

Article

Biophysical studies of DNA modified with conformationally constrained nucleotides: comparison of 2′-exo (north) and 3′-exo (south) ‘locked’ templates.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1978, doi. 10.1093/nar/gkm025

By:

Maderia, Melissa;
Shenoy, Shilpa;
Van, Que N.;
Marquez, Victor E.;
Barchi, Joseph J.

Publication type:

Article

Dual priming oligonucleotide system for the multiplex detection of respiratory viruses and SNP genotyping of CYP2C19 gene.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e40, doi. 10.1093/nar/gkm051

By:

Chun, Jong-Yoon;
Kim, Kyoung-Joong;
Hwang, In-Taek;
Kim, Yun-Jee;
Lee, Dae-Hoon;
Lee, In-Kyoung;
Kim, Jong-Kee

Publication type:

Article

A synthetic luxCDABE gene cluster optimized for expression in high-GC bacteria.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e46, doi. 10.1093/nar/gkm086

By:

Craney, Arryn;
Hohenauer, Tobias;
Xu, Ye;
Navani, Naveen Kumar;
Li, Yingfu;
Nodwell, Justin

Publication type:

Article

Rapid coupling of Surface Plasmon Resonance (SPR and SPRi) and ProteinChip™ based mass spectrometry for the identification of proteins in nucleoprotein interactions.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e39, doi. 10.1093/nar/gkm030

By:

Bouffartigues, Emeline;
Leh, Hervé;
Anger-Leroy, Marielle;
Rimsky, Sylvie;
Buckle, Malcolm

Publication type:

Article

Impaired expression of NER gene network in sporadic solid tumors.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1859, doi. 10.1093/nar/gkm061

By:

Castro, Mauro A. A.;
Mombach, José C. M.;
de Almeida, Rita M. C.;
Moreira, José C. F.

Publication type:

Article

Beyond the 3′ end: experimental validation of extended transcript isoforms.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1947, doi. 10.1093/nar/gkm062

By:

Moucadel, Virginie;
Lopez, Fabrice;
Ara, Takeshi;
Benech, Philippe;
Gautheret, Daniel

Publication type:

Article

USER™ friendly DNA engineering and cloning method by uracil excision.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1992, doi. 10.1093/nar/gkm041

By:

Bitinaite, Jurate;
Rubino, Michelle;
Varma, Kamini Hingorani;
Schildkraut, Ira;
Vaisvila, Romualdas;
Vaiskunaite, Rita

Publication type:

Article

Role of GAC63 in transcriptional activation mediated by β-catenin.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2084, doi. 10.1093/nar/gkm095

By:

Chen, Yong-Heng;
Yang, Catherine K.;
Xia, Meng;
Ou, Chen-Yin;
Stallcup, Michael R.

Publication type:

Article

A versatile ligation-independent cloning method suitable for high-throughput expression screening applications.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e45, doi. 10.1093/nar/gkm047

By:

Berrow, Nick S.;
Alderton, David;
Sainsbury, Sarah;
Nettleship, Joanne;
Assenberg, Rene;
Rahman, Nahid;
Stuart, David I.;
Owens, Raymond J.

Publication type:

Article

Involvement of chromatin and histone deacetylation in SV40 T antigen transcription regulation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1958, doi. 10.1093/nar/gkl1113

By:

Valls, Ester;
Blanco-García, Noemí;
Aquizu, Naiara;
Piedra, David;
Estarás, Conchi;
de la Cruz, Xavier;
Martínez-Balbás, Marian A.

Publication type:

Article

G-quadruplexes in promoters throughout the human genome.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2105, doi. 10.1093/nar/gkm109

By:

Huppert, Julian L.;
Balasubramanian, Shankar

Publication type:

Article

Ribosomal frameshifting in decoding antizyme mRNAs from yeast and protists to humans: close to 300 cases reveal remarkable diversity despite underlying conservation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1842, doi. 10.1093/nar/gkm035

By:

Ivanov, Ivaylo P.;
Atkins, John F.

Publication type:

Article

Tat competes with HEXIM1 to increase the active pool of P-TEFb for HIV-1 transcription.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2003, doi. 10.1093/nar/gkm063

By:

Barboric, Matjaz;
Yik, Jasper H. N.;
Czudnochowski, Nadine;
Yang, Zhiyuan;
Chen, Ruichuan;
Contreras, Xavier;
Geyer, Matthias;
Matija Peterlin, B.;
Zhou, Qiang

Publication type:

Article

Novel protein fold discovered in the PabI family of restriction enzymes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1908, doi. 10.1093/nar/gkm091

By:

Miyazono, Ken-ichi;
Watanabe, Miki;
Kosinski, Jan;
Ishikawa, Ken;
Kamo, Masayuki;
Sawasaki, Tatsuya;
Nagata, Koji;
Bujnicki, Janusz M.;
Endo, Yaeta;
Tanokura, Masaru;
Kobayashi, Ichizo

Publication type:

Article

Alternative splicing and bioinformatic analysis of human U12-type introns.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1833, doi. 10.1093/nar/gkm026

By:

Chang, Wen-Cheng;
Chen, Yung-Chia;
Lee, Kuo-Ming;
Tarn, Woan-Yuh

Publication type:

Article

Quantitative surface-enhanced resonance Raman scattering of phthalocyanine-labelled oligonucleotides.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e42, doi. 10.1093/nar/gkm042

By:

Macaskill, A.;
Chernonosov, A. A.;
Koval, V. V.;
Lukyanets, E. A.;
Fedorova, O. S.;
Smith, W. E.;
Faulds, K.;
Graham, D.

Publication type:

Article

Crystal structures of DNA:DNA and DNA:RNA duplexes containing 5-(N-aminohexyl)carbamoyl-modified uracils reveal the basis for properties as antigene and antisense molecules.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1969, doi. 10.1093/nar/gkl821

By:

Juan, Ella Czarina Magat;
Kondo, Jiro;
Kurihara, Takeshi;
Ito, Takanori;
Ueno, Yoshihito;
Matsuda, Akira;
Takénaka, Akio

Publication type:

Article

Switched alternative splicing of oncogene CoAA during embryonal carcinoma stem cell differentiation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1919, doi. 10.1093/nar/gkl1092

By:

Yang, Zheqiong;
Sui, Yang;
Xiong, Shiqin;
Liour, Sean S.;
Phillips, Andrew C.;
Ko, Lan

Publication type:

Article

SNP discovery by mismatch-targeting of Mu transposition.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e44, doi. 10.1093/nar/gkm070

By:

Orsini, Luisa;
Pajunen, Maria;
Hanski, Ilkka;
Savilahti, Harri

Publication type:

Article

The genomic HDV ribozyme utilizes a previously unnoticed U-turn motif to accomplish fast site-specific catalysis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1933, doi. 10.1093/nar/gkl1104

By:

Sefcikova, Jana;
Krasovska, Maryna V.;
Šponer, Jiří;
Walter, Nils G.

Publication type:

Article

Crystal structure of the left-handed archaeal RadA helical filament: identification of a functional motif for controlling quaternary structures and enzymatic functions of RecA family proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1787, doi. 10.1093/nar/gkl1131

By:

Chen, Li-Tzu;
Ko, Tzu-Ping;
Chang, Yuan-Chih;
Lin, Kuei-An;
Chang, Chia-Seng;
Wang, Andrew H.-J.;
Wang, Ting-Fang

Publication type:

Article

Controlling the motor activity of a transcription-repair coupling factor: autoinhibition and the role of RNA polymerase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1802, doi. 10.1093/nar/gkm019

By:

Smith, Abigail J.;
Szczelkun, Mark D.;
Savery, Nigel J.

Publication type:

Article

Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2035, doi. 10.1093/nar/gkm064

By:

Kaus-Drobek, Magdalena;
Czapinska, Honorata;
Sokołowska, Monika;
Tamulaitis, Gintautas;
Szczepanowski, Roman H.;
Urbanke, Claus;
Siksnys, Virginijus;
Bochtler, Matthias

Publication type:

Article

The second AT-hook of the architectural transcription factor HMGA2 is determinant for nuclear localization and function.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1751, doi. 10.1093/nar/gkl1106

By:

Cattaruzzi, Giacomo;
Altamura, Sandro;
Tessari, Michela A.;
Rustighi, Alessandra;
Giancotti, Vincenzo;
Pucillo, Carlo;
Manfioletti, Guidalberto

Publication type:

Article

Motif programming: a microgene-based method for creating synthetic proteins containing multiple functional motifs.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e38, doi. 10.1093/nar/gkm017

By:

Saito, Hirohide;
Minamisawa, Tamiko;
Shiba, Kiyotaka

Publication type:

Article

Methylation-sensitive high resolution melting (MS-HRM): a new approach for sensitive and high-throughput assessment of methylation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e41, doi. 10.1093/nar/gkm013

By:

Wojdacz, Tomasz K.;
Dobrovic, Alexander

Publication type:

Article

Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2026, doi. 10.1093/nar/gkm097

By:

Mujeeb, Anwer;
Ulyanov, Nikolai B.;
Georgantis, Stefanos;
Smirnov, Ivan;
Chung, Janet;
Parslow, Tristram G.;
James, Thomas L.

Publication type:

Article

Pressure dissociation of integration host factor–DNA complexes reveals flexibility-dependent structural variation at the protein–DNA interface.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1761, doi. 10.1093/nar/gkl1122

By:

Senear, Donald F.;
Tretyachenko-Ladokhina, Vira;
Opel, Michael L.;
Aeling, Kimberly A.;
Wesley Hatfield, G.;
Franklin, Laurie M.;
Darlington, Reuben C.;
Alexander Ross, J.B.

Publication type:

Article

Mlc regulation of Salmonella pathogenicity island I gene expression via hilE repression.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1822, doi. 10.1093/nar/gkm060

By:

Lim, Sangyong;
Yun, Jiae;
Yoon, Hyunjin;
Park, Chehwee;
Kim, Boowon;
Jeon, Byeonghwa;
Kim, Dongho;
Ryu, Sangryeol

Publication type:

Article

Mechanism of the formation of DNA–protein cross-links by antitumor cisplatin.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1812

By:

Chválová, Kateřina;
Brabec, Viktor;
Kašpárková, Jana

Publication type:

Article

Vectors for co-expression of an unrestricted number of proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e43, doi. 10.1093/nar/gkm067

By:

Scheich, Christoph;
Kümmel, Daniel;
Soumailakakis, Dimitri;
Heinemann, Udo;
Büssow, Konrad

Publication type:

Article

In vivo and in vitro investigation of bacterial type B RNase P interaction with tRNA 3′-CCA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2060, doi. 10.1093/nar/gkm005

By:

Wegscheid, Barbara;
Hartmann, Roland K.

Publication type:

Article

Studies on the function of the riboregulator 6S RNA from E. coli: RNA polymerase binding, inhibition of in vitro transcription and synthesis of RNA-directed de novo transcripts.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1885, doi. 10.1093/nar/gkm085

By:

Gildehaus, Nina;
Neußer, Thomas;
Wurm, Reinhild;
Wagner, Rolf

Publication type:

Article

Mg2+-dependent folding of a Diels-Alderase ribozyme probed by single-molecule FRET analysis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2047, doi. 10.1093/nar/gkm072

By:

Kobitski, Andrei Yu.;
Nierth, Alexander;
Helm, Mark;
Jäschke, Andres;
Nienhaus, G. Ulrich

Publication type:

Article

QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2013, doi. 10.1093/nar/gkm076

By:

Colella, Stefano;
Yau, Christopher;
Taylor, Jennifer M.;
Mirza, Ghazala;
Butler, Helen;
Clouston, Penny;
Bassett, Anne S.;
Seller, Anneke;
Holmes, Christopher C.;
Ragoussis, Jiannis

Publication type:

Article

An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1868

By:

Cléry, A.;
Bourguignon-Igel, V.;
Allmang, C.;
Krol, A.;
Branlant, C.

Publication type:

Article

EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 2074, doi. 10.1093/nar/gkm081

By:

Jain, Monica;
Shrager, Jeff;
Harris, Elizabeth H.;
Halbrook, Renee;
Grossman, Arthur R.;
Hauser, Charles;
Vallon, Olivier

Publication type:

Article

Elevating the levels of Sox2 in embryonal carcinoma cells and embryonic stem cells inhibits the expression of Sox2:Oct-3/4 target genes†.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. 1773, doi. 10.1093/nar/gkm059

By:

Boer, Brian;
Kopp, Janel;
Mallanna, Sunil;
Desler, Michelle;
Chakravarthy, Harini;
Wilder, Phillip J.;
Bernadt, Cory;
Rizzino, Angie

Publication type:

Article

Visualizing the proteome of Escherichia coli: an efficient and versatile method for labeling chromosomal coding DNA sequences (CDSs) with fluorescent protein genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 6, p. e37, doi. 10.1093/nar/gkl1158

By:

Watt, Rory M.;
Wang, Jing;
Leong, Meikid;
Kung, Hsiang-fu;
Cheah, Kathryn S.E.;
Liu, Depei;
Danchin, Antoine;
Huang, Jian-Dong

Publication type:

Article