Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 5

Results: 39

Proteomic analysis of the U1 snRNP of Schizosaccharomyces pombe reveals three essential organism-specific proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1391, doi. 10.1093/nar/gkl1144

By:

Newo, Alain N. S.;
Lützelberger, Martin;
Bottner, Claudia A.;
Wehland, Jürgen;
Wissing, Josef;
Jänsch, Lothar;
Käufer, Norbert F.

Publication type:

Article

An optimized method for detecting gamma-H2AX in blood cells reveals a significant interindividual variation in the gamma-H2AX response among humans.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e36, doi. 10.1093/nar/gkl1169

By:

Ismail, Ismail Hassan;
Wadhra, Tabasum Imran;
Hammarsten, Ola

Publication type:

Article

Modeling RNA tertiary structure motifs by graph-grammars.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1726, doi. 10.1093/nar/gkm069

By:

St-Onge, Karine;
Thibault, Philippe;
Hamel, Sylvie;
Major, François

Publication type:

Article

Resolving fast and slow motions in the internal loop containing stem-loop 1 of HIV-1 that are modulated by Mg2+ binding: role in the kissing–duplex structural transition.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1698, doi. 10.1093/nar/gkm020

By:

Sun, Xiaoyan;
Zhang, Qi;
Al-Hashimi, Hashim M.

Publication type:

Article

Translational repression of mouse mu opioid receptor expression via leaky scanning.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1501, doi. 10.1093/nar/gkm034

By:

Song, Kyu Young;
Hwang, Cheol Kyu;
Kim, Chun Sung;
Choi, Hack Sun;
Law, Ping-Yee;
Wei, Li-Na;
Loh, Horace H.

Publication type:

Article

Localizing hotspots of antisense transcription.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1488, doi. 10.1093/nar/gkm027

By:

Finocchiaro, Giacomo;
Carro, Maria Stella;
Francois, Stephanie;
Parise, Paola;
DiNinni, Valentina;
Muller, Heiko

Publication type:

Article

The C-terminal domain of yeast PCNA is required for physical and functional interactions with Cdc9 DNA ligase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1624, doi. 10.1093/nar/gkm006

By:

Vijayakumar, Sangeetha;
Chapados, Brian R.;
Schmidt, Kristina H.;
Kolodner, Richard D.;
Tainer, John A.;
Tomkinson, Alan E.

Publication type:

Article

Combinatorial expression vector engineering for tuning of recombinant protein production in Escherichia coli.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e32, doi. 10.1093/nar/gkl1171

By:

Bandmann, Nina;
Nygren, Per-Åke

Publication type:

Article

Quantitative and mechanism-based investigation of post-nuclear delivery events between adenovirus and lipoplex.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1533, doi. 10.1093/nar/gkl1165

By:

Hama, Susumu;
Akita, Hidetaka;
Iida, Shinya;
Mizuguchi, Hiroyuki;
Harashima, Hideyoshi

Publication type:

Article

Biochemical and genetic analysis of RNA cap guanine-N2 methyltransferases from Giardia lamblia and Schizosaccharomyces pombe.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1411, doi. 10.1093/nar/gkl1150

By:

Hausmann, Stéphane;
Ramirez, Alejandro;
Schneider, Susanne;
Schwer, Beate;
Shuman, Stewart

Publication type:

Article

Cryptic loxP sites in mammalian genomes: genome-wide distribution and relevance for the efficiency of BAC/PAC recombineering techniques.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1402, doi. 10.1093/nar/gkl1108

By:

Semprini, S.;
Troup, T.J.;
Kotelevtseva, N.;
King, K.;
Davis, J.R.E.;
Mullins, L.J.;
Chapman, K.E.;
Dunbar, D.R.;
Mullins, J.J.

Publication type:

Article

Novel DNA probes with low background and high hybridization-triggered fluorescence.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e30, doi. 10.1093/nar/gkl1136

By:

Lukhtanov, Eugeny A.;
Lokhov, Sergey G.;
Gorn, Vladimir V.;
Podyminogin, Mikhail A.;
Mahoney, Walt

Publication type:

Article

Exocyclic amino groups of flanking guanines govern sequence-dependent adduct conformations and local structural distortions for minor groove-aligned benzo[a]pyrenyl-guanine lesions in a GG mutation hotspot context.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1555

By:

Rodríguez, Fabián A.;
Cai, Yuqin;
Lin, Chin;
Tang, Yijin;
Kolbanovskiy, Alexander;
Amin, Shantu;
Patel, Dinshaw J.;
Broyde, Suse;
Geacintov, Nicholas E.

Publication type:

Article

Eukaryotic ribosomal protein RPS25 interacts with the conserved loop region in a dicistroviral intergenic internal ribosome entry site.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1514, doi. 10.1093/nar/gkl1121

By:

Nishiyama, Takashi;
Yamamoto, Hiroshi;
Uchiumi, Toshio;
Nakashima, Nobuhiko

Publication type:

Article

DISPLAR: an accurate method for predicting DNA-binding sites on protein surfaces.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1465, doi. 10.1093/nar/gkm008

By:

Tjong, Harianto;
Zhou, Huan-Xiang

Publication type:

Article

Ribosomal protein L20 controls expression of the Bacillus subtilis infC operon via a transcription attenuation mechanism.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1578, doi. 10.1093/nar/gkm011

By:

Choonee, Nasslie;
Even, Sergine;
Zig, Lena;
Putzer, Harald

Publication type:

Article

The availability of the primer activation signal (PAS) affects the efficiency of HIV-1 reverse transcription initiation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1649, doi. 10.1093/nar/gkm046

By:

Ooms, Marcel;
Cupac, Daniel;
Abbink, Truus E. M.;
Huthoff, Hendrik;
Berkhout, Ben

Publication type:

Article

Group II intron in Bacillus cereus has an unusual 3′ extension and splices 56 nucleotides downstream of the predicted site.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1612, doi. 10.1093/nar/gkm031

By:

Stabell, Fredrik B.;
Tourasse, Nicolas J.;
Ravnum, Solveig;
Kolstø, Anne-Brit

Publication type:

Article

Deinococcus glutaminyl-tRNA synthetase is a chimer between proteins from an ancient and the modern pathways of aminoacyl-tRNA formation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1421, doi. 10.1093/nar/gkl1164

By:

Deniziak, Marzanna;
Sauter, Claude;
Becker, Hubert Dominique;
Paulus, Caroline Alexandra;
Giegé, Richard;
Kern, Daniel

Publication type:

Article

Allelic imbalance in gene expression as a guide to cis-acting regulatory single nucleotide polymorphisms in cancer cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e34, doi. 10.1093/nar/gkl1152

By:

Milani, Lili;
Gupta, Manu;
Andersen, Malin;
Dhar, Sumeer;
Fryknäs, Mårten;
Isaksson, Anders;
Larsson, Rolf;
Syvänen, Ann-Christine

Publication type:

Article

Rabies virus matrix protein interplay with eIF3, new insights into rabies virus pathogenesis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1522, doi. 10.1093/nar/gkl1127

By:

Komarova, Anastassia V.;
Real, Eléonore;
Borman, Andrew M.;
Brocard, Michèle;
England, Patrick;
Tordo, Noël;
Hershey, John W.B.;
Kean, Katherine M.;
Jacob, Yves

Publication type:

Article

The structure and function of small nucleolar ribonucleoproteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1452, doi. 10.1093/nar/gkl1172

By:

Reichow, Steve L.;
Hamma, Tomoko;
Ferré-D'Amaré, Adrian R.;
Varani, Gabriele

Publication type:

Article

Interplay between CRP-cAMP and PII-Ntr systems forms novel regulatory network between carbon metabolism and nitrogen assimilation in Escherichia coli.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1432, doi. 10.1093/nar/gkl1142

By:

Mao, Xian-Jun;
Huo, Yi-Xin;
Buck, Martin;
Kolb, Annie;
Wang, Yi-Ping

Publication type:

Article

Interactions of Kid–Kis toxin–antitoxin complexes with the parD operator-promoter region of plasmid R1 are piloted by the Kis antitoxin and tuned by the stoichiometry of Kid–Kis oligomers.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1737, doi. 10.1093/nar/gkm073

By:

Monti, Maria C.;
Hernández-Arriaga, Ana M.;
Kamphuis, Monique B.;
López-Villarejo, Juan;
Heck, Albert J. R.;
Boelens, Rolf;
Díaz-Orejas, Ramón;
van den Heuvel, Robert H. H.

Publication type:

Article

Ovol1 represses its own transcription by competing with transcription activator c-Myb and by recruiting histone deacetylase activity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1687, doi. 10.1093/nar/gkl1141

By:

Nair, Mahalakshmi;
Bilanchone, Virginia;
Ortt, Kori;
Sinha, Satrajit;
Dai, Xing

Publication type:

Article

Characterization of in vitro and in vivo hypomethylating effects of decitabine in acute myeloid leukemia by a rapid, specific and sensitive LC-MS/MS method.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e31, doi. 10.1093/nar/gkl1156

By:

Liu, Zhongfa;
Liu, Shujun;
Xie, Zhiliang;
Blum, William;
Perrotti, Danilo;
Paschka, Peter;
Klisovic, Rebecca;
Byrd, John;
Chan, Kenneth K.;
Marcucci, Guido

Publication type:

Article

Alternating-electric-field-enhanced reversible switching of DNA nanocontainers with pH.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e33, doi. 10.1093/nar/gkl1161

By:

Mao, Youdong;
Liu, Dongsheng;
Wang, Shutao;
Luo, Songnian;
Wang, Wenxing;
Yang, Yanlian;
Ouyang, Qi;
Jiang, Lei

Publication type:

Article

A rapid reaction analysis of uracil DNA glycosylase indicates an active mechanism of base flipping.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1478, doi. 10.1093/nar/gkm018

By:

Bellamy, Stuart R.W.;
Krusong, Kuakarun;
Baldwin, Geoff S.

Publication type:

Article

2′-Fluoro-4′-thioarabino-modified oligonucleotides: conformational switches linked to siRNA activity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1441, doi. 10.1093/nar/gkl1153

By:

Watts, Jonathan K.;
Choubdar, Niloufar;
Sadalapure, Kashinath;
Robert, Francis;
Wahba, Alexander S.;
Pelletier, Jerry;
Mario Pinto, B.;
Damha, Masad J.

Publication type:

Article

Interaction between trichosanthin, a ribosome-inactivating protein, and the ribosomal stalk protein P2 by chemical shift perturbation and mutagenesis analyses.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1660, doi. 10.1093/nar/gkm065

By:

Chan, Denise S.B.;
Chu, Lai-On;
Lee, Ka-Ming;
Too, Priscilla H.M.;
Ma, Kit-Wan;
Sze, Kong-Hung;
Zhu, Guang;
Shaw, Pang-Chui;
Wong, Kam-Bo

Publication type:

Article

Small ncRNA transcriptome analysis from kinetoplast mitochondria of Leishmania tarentolae.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1544, doi. 10.1093/nar/gkm004

By:

Madej, Monika J.;
Alfonzo, Juan D.;
Hüttenhofer, Alexander

Publication type:

Article

Rapid determination of the active fraction of DNA repair glycosylases: a novel fluorescence assay for trapped intermediates.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1601, doi. 10.1093/nar/gkm021

By:

Blaisdell, Jeffrey O.;
Wallace, Susan S.

Publication type:

Article

Human base excision repair complex is physically associated to DNA replication and cell cycle regulatory proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1569, doi. 10.1093/nar/gkl1159

By:

Parlanti, Eleonora;
Locatelli, Giada;
Maga, Giovanni;
Dogliotti, Eugenia

Publication type:

Article

Exploiting noise in array CGH data to improve detection of DNA copy number change.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e35

By:

Hu, Jing;
Gao, Jian-Bo;
Cao, Yinhe;
Bottinger, Erwin;
Zhang, Weijia

Publication type:

Article

Homing endonuclease I-TevIII: dimerization as a means to a double-strand break.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1589, doi. 10.1093/nar/gkl1170

By:

Robbins, Justin B.;
Stapleton, Michelle;
Stanger, Matthew J.;
Smith, Dorie;
Dansereau, John T.;
Derbyshire, Victoria;
Belfort, Marlene

Publication type:

Article

Insights into Fanconi Anaemia from the structure of human FANCE.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1638, doi. 10.1093/nar/gkm033

By:

Nookala, Ravi K.;
Hussain, Shobbir;
Pellegrini, Luca

Publication type:

Article

A new method for accurate assessment of DNA quality after bisulfite treatment.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. e29, doi. 10.1093/nar/gkl1134

By:

Ehrich, Mathias;
Zoll, Scott;
Sur, Sudipto;
van den Boom, Dirk

Publication type:

Article

Ubiquitin-interaction motifs of RAP80 are critical in its regulation of estrogen receptor α.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1673, doi. 10.1093/nar/gkl1112

By:

Yan, Jun;
Kim, Yong-Sik;
Yang, Xiao-Ping;
Albers, Michael;
Koegl, Manfred;
Jetten, Anton M.

Publication type:

Article

Transgenerational changes in the genome stability and methylation in pathogen-infected plants.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 5, p. 1714, doi. 10.1093/nar/gkm029

By:

Boyko, Alexander;
Kathiria, Palak;
Zemp, Franz J.;
Yao, Youli;
Pogribny, Igor;
Kovalchuk, Igor

Publication type:

Article