Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 4

Results: 41

Energetics of protein–DNA interactions.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1039, doi. 10.1093/nar/gkl1103

By:

Donald, Jason E.;
Chen, William W.;
Shakhnovich, Eugene I.

Publication type:

Article

Sumoylation delays the ATF7 transcription factor subcellular localization and inhibits its transcriptional activity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1134, doi. 10.1093/nar/gkl1168

By:

Hamard, Pierre-Jacques;
Boyer-Guittaut, Michaël;
Camuzeaux, Barbara;
Dujardin, Denis;
Hauss, Charlotte;
Oelgeschläger, Thomas;
Vigneron, Marc;
Kedinger, Claude;
Chatton, Bruno

Publication type:

Article

Electrospray ionisation-cleavable tandem nucleic acid mass tag–peptide nucleic acid conjugates: synthesis and applications to quantitative genomic analysis using electrospray ionisation-MS/MS.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e28, doi. 10.1093/nar/gkl1123

By:

Thompson, Andrew;
Prescott, Mark;
Chelebi, Noorhan;
Smith, John;
Brown, Tom;
Schmidt, Günter

Publication type:

Article

Recognition of pyrrolysine tRNA by the Desulfitobacterium hafniense pyrrolysyl-tRNA synthetase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1270, doi. 10.1093/nar/gkl1151

By:

Herring, Stephanie;
Ambrogelly, Alexandre;
Polycarpo, Carla R.;
Söll, Dieter

Publication type:

Article

DNA polymerase δ-dependent repair of DNA single strand breaks containing 3′-end proximal lesions.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1054, doi. 10.1093/nar/gkl1115

By:

Parsons, Jason L.;
Preston, Bradley D.;
O'Connor, Timothy R.;
Dianov, Grigory L.

Publication type:

Article

CRD-BP shields c-myc and MDR-1 RNA from endonucleolytic attack by a mammalian endoribonuclease.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1209, doi. 10.1093/nar/gkl1148

By:

Sparanese, Dan;
Lee, Chow H.

Publication type:

Article

High-yield production of short GpppA- and 7MeGpppA-capped RNAs and HPLC-monitoring of methyltransfer reactions at the guanine-N7 and adenosine-2′O positions.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e26, doi. 10.1093/nar/gkl1119

By:

Peyrane, F.;
Selisko, B.;
Decroly, E.;
Vasseur, J. J.;
Benarroch, D.;
Canard, B.;
Alvarez, K.

Publication type:

Article

Arabidopsis thaliana telomeric DNA-binding protein 1 is required for telomere length homeostasis and its Myb-extension domain stabilizes plant telomeric DNA binding.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1333, doi. 10.1093/nar/gkm043

By:

Hwang, Moo Gak;
Cho, Myeon Haeng

Publication type:

Article

Cruciform extrusion propensity of human translocation-mediating palindromic AT-rich repeats.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1198, doi. 10.1093/nar/gkm036

By:

Kogo, Hiroshi;
Inagaki, Hidehito;
Ohye, Tamae;
Kato, Takema;
Emanuel, Beverly S.;
Kurahashi, Hiroki

Publication type:

Article

Structure-based prediction of C2H2 zinc-finger binding specificity: sensitivity to docking geometry.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1085, doi. 10.1093/nar/gkl1155

By:

Siggers, Trevor W.;
Honig, Barry

Publication type:

Article

RNA chaperone activity and RNA-binding properties of the E. coli protein StpA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1257, doi. 10.1093/nar/gkl1143

By:

Mayer, Oliver;
Rajkowitsch, Lukas;
Lorenz, Christina;
Konrat, Robert;
Schroeder, Renée

Publication type:

Article

Raman and Raman optical activity (ROA) analysis of RNA structural motifs in Domain I of the EMCV IRES.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1169, doi. 10.1093/nar/gkm012

By:

Hobro, Alison J.;
Rouhi, Mansour;
Blanch, Ewan W.;
Conn, Graeme L.

Publication type:

Article

Yeast Rrp14p is required for ribosomal subunit synthesis and for correct positioning of the mitotic spindle during mitosis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1354, doi. 10.1093/nar/gkl824

By:

Oeffinger, Marlene;
Fatica, Alessandro;
Rout, Michael P.;
Tollervey, David

Publication type:

Article

Meiotic association between Spo11 regulated by Rec102, Rec104 and Rec114.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1119, doi. 10.1093/nar/gkl1162

By:

Sasanuma, Hiroyuki;
Murakami, Hajime;
Fukuda, Tomoyuki;
Shibata, Takehiko;
Nicolas, Alain;
Ohta, Kunihiro

Publication type:

Article

Rpm2p, a protein subunit of mitochondrial RNase P, physically and genetically interacts with cytoplasmic processing bodies.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1301, doi. 10.1093/nar/gkm023

By:

Stribinskis, Vilius;
Ramos, Kenneth S.

Publication type:

Article

The gateway pDEST17 expression vector encodes a −1 ribosomal frameshifting sequence.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1322, doi. 10.1093/nar/gkm003

By:

Belfield, Eric J.;
Hughes, Richard K.;
Tsesmetzis, Nicolas;
Naldrett, Mike J.;
Casey, Rod

Publication type:

Article

Survey and Summary.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1389

By:

Häsler, Julien;
Strub, Katharina

Publication type:

Article

The active site residue Valine 867 in human telomerase reverse transcriptase influences nucleotide incorporation and fidelity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1155, doi. 10.1093/nar/gkm002

By:

Drosopoulos, William C.;
Prasad, Vinayaka R.

Publication type:

Article

Effects of Friedreich's ataxia (GAA)n·(TTC)n repeats on RNA synthesis and stability.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1075, doi. 10.1093/nar/gkl1140

By:

Krasilnikova, Maria M.;
Kireeva, Maria L.;
Petrovic, Vladimir;
Knijnikova, Nelli;
Kashlev, Mikhail;
Mirkin, Sergei M.

Publication type:

Article

A Col9a1 enhancer element activated by two interdependent SOX9 dimers.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1178, doi. 10.1093/nar/gkm014

By:

Genzer, Mary Ann;
Bridgewater, Laura C.

Publication type:

Article

ATF2 is required for amino acid-regulated transcription by orchestrating specific histone acetylation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1312, doi. 10.1093/nar/gkm038

By:

Bruhat, Alain;
Chérasse, Yoan;
Maurin, Anne-Catherine;
Breitwieser, Wolfgang;
Parry, Laurent;
Deval, Christiane;
Jones, Nic;
Jousse, Céline;
Fafournoux, Pierre

Publication type:

Article

Functional overlap between conserved and diverged KH domains in Saccharomyces cerevisiae SCP160.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1108, doi. 10.1093/nar/gkl1160

By:

Brykailo, Melissa A.;
Corbett, Anita H.;
Fridovich-Keil, Judith L.

Publication type:

Article

Automated parallel isolation of multiple species of non-coding RNAs by the reciprocal circulating chromatography method.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e24, doi. 10.1093/nar/gkl1129

By:

Miyauchi, Kenjyo;
Ohara, Tomoya;
Suzuki, Tsutomu

Publication type:

Article

DNA supercoiling suppresses real-time PCR: a new approach to the quantification of mitochondrial DNA damage and repair.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1377, doi. 10.1093/nar/gkm010

By:

Chen, Jinsong;
Kadlubar, Fred F.;
Chen, Junjian Z.

Publication type:

Article

Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1230, doi. 10.1093/nar/gkl1099

By:

Ruiz-Masó, José A.;
Lurz, Rudi;
Espinosa, Manuel;
del Solar, Gloria

Publication type:

Article

Identifying synergistic regulation involving c-Myc and sp1 in human tissues.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1098, doi. 10.1093/nar/gkl1157

By:

Parisi, Fabio;
Wirapati, Pratyaksha;
Naef, Felix

Publication type:

Article

Identification and characterization of human Mex-3 proteins, a novel family of evolutionarily conserved RNA-binding proteins differentially localized to processing bodies.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1289, doi. 10.1093/nar/gkm016

By:

Buchet-Poyau, Karine;
Courchet, Julien;
Hir, Hervé Le;
Séraphin, Bertrand;
Scoazec, Jean-Yves;
Duret, Laurent;
Domon-Dell, Claire;
Freund, Jean-Noël;
Billaud, Marc

Publication type:

Article

DNA strand displacement, strand annealing and strand swapping by the Drosophila Bloom's syndrome helicase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1367, doi. 10.1093/nar/gkl831

By:

Weinert, Brian T.;
Rio, Donald C.

Publication type:

Article

Inhibition of MDR1 expression with altritol-modified siRNAs.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1064, doi. 10.1093/nar/gkl1126

By:

Fisher, Michael;
Abramov, Mikhail;
Van Aerschot, Arthur;
Xu, Dong;
Juliano, Rudolph L.;
Herdewijn, Piet

Publication type:

Article

Sigma E controls biogenesis of the antisense RNA MicA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1279, doi. 10.1093/nar/gkl1154

By:

Udekwu, Klas I.;
Wagner, E. Gerhart H.

Publication type:

Article

An inducible system for expression and validation of the specificity of short hairpin RNA in mammalian cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e22

By:

Ma, Hoi Tang;
On, Kin Fan;
Tsang, Yiu Huen;
Poon, Randy Y.C.

Publication type:

Article

Specific residues at every third position of siRNA shape its efficient RNAi activity.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e27, doi. 10.1093/nar/gkl1120

By:

Katoh, Takayuki;
Suzuki, Tsutomu

Publication type:

Article

High-resolution crystal structure of the intramolecular d(TpA) thymine–adenine photoadduct and its mechanistic implications.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1048, doi. 10.1093/nar/gkl1101

By:

Davies, R. Jeremy H.;
Malone, John F.;
Gan, Yu;
Cardin, Christine J.;
Lee, Michael P.H.;
Neidle, Stephen

Publication type:

Article

Design and synthesis of boronic-acid-labeled thymidine triphosphate for incorporation into DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1222, doi. 10.1093/nar/gkl1091

By:

Lin, Na;
Yan, Jun;
Huang, Zhen;
Altier, Craig;
Li, Minyong;
Carrasco, Nicolas;
Suyemoto, Mitsu;
Johnston, Lynette;
Wang, Siming;
Wang, Qian;
Fang, Hao;
Caton-Williams, Julianne;
Wang, Binghe

Publication type:

Article

Use of signal sequences as an in situ removable sequence element to stimulate protein synthesis in cell-free extracts.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e21, doi. 10.1093/nar/gkl917

By:

Ahn, Jin-Ho;
Hwang, Mi-Yeon;
Lee, Kyung-Ho;
Choi, Cha-Yong;
Kim, Dong-Myung

Publication type:

Article

Dual role of DNA methylation inside and outside of CTCF-binding regions in the transcriptional regulation of the telomerase hTERT gene.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1245, doi. 10.1093/nar/gkl1125

By:

Renaud, S.;
Loukinov, D.;
Abdullaev, Z.;
Guilleret, I.;
Bosman, F. T.;
Lobanenkov, V.;
Benhattar, J.

Publication type:

Article

Release Factors 2 from Escherichia coli and Thermus thermophilus: structural, spectroscopic and microcalorimetric studies.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1343, doi. 10.1093/nar/gkl696

By:

Zoldák, Gabriel;
Redecke, Lars;
Svergun, Dmitri I.;
Konarev, Peter V.;
Voertler, C. Stefan;
Dobbek, Holger;
Sedlák, Erik;
Sprinzl, Mathias

Publication type:

Article

Dry-reagent disposable dipstick test for visual screening of seven leukemia-related chromosomal translocations.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e23, doi. 10.1093/nar/gkl1097

By:

Kalogianni, Despina P.;
Bravou, Vasiliki;
Christopoulos, Theodore K.;
Ioannou, Penelope C.;
Zoumbos, Nicholas C.

Publication type:

Article

Caf1 regulates translocation of ribonucleotide reductase by releasing nucleoplasmic Spd1–Suc22 assembly.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1187, doi. 10.1093/nar/gkm015

By:

Takahashi, Shinya;
Kontani, Kenji;
Araki, Yasuhiro;
Katada, Toshiaki

Publication type:

Article

DNA binding mechanism revealed by high resolution crystal structure of Arabidopsis thaliana WRKY1 protein.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. 1145, doi. 10.1093/nar/gkm001

By:

Duan, Ming-Rui;
Nan, Jie;
Liang, Yu-He;
Mao, Peng;
Lu, Lu;
Li, Lanfen;
Wei, Chunhong;
Lai, Luhua;
Li, Yi;
Su, Xiao-Dong

Publication type:

Article

Reversible site-specific tagging of enzymatically synthesized RNAs using aldehyde–hydrazine chemistry and protease-cleavable linkers.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 4, p. e25, doi. 10.1093/nar/gkl1110

By:

Pfander, Stephanie;
Fiammengo, Roberto;
Kirin, Srećko I.;
Metzler-Nolte, Nils;
Jäschke, Andres

Publication type:

Article