Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 2

Results: 44

Functional organization of the Rpb5 subunit shared by the three yeast RNA polymerases.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 634, doi. 10.1093/nar/gkl686

By:

Zaros, Cécile;
Briand, Jean-François;
Boulard, Yves;
Labarre-Mariotte, Sylvie;
Garcia-Lopez, M. Carmen;
Thuriaux, Pierre;
Navarro, Francisco

Publication type:

Article

Chloroplast phosphoglycerate kinase, a gluconeogenetic enzyme, is required for efficient accumulation of Bamboo mosaic virus.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 424, doi. 10.1093/nar/gkl1061

By:

Lin, Jen-Wen;
Ding, Min-Pey;
Hsu, Yau-Heiu;
Tsai, Ching-Hsiu

Publication type:

Article

Efficient signaling platforms built from a small catalytic DNA and doubly labeled fluorogenic substrates.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 401

By:

Chiuman, William;
Li, Yingfu

Publication type:

Article

Erratum.

Published in:: Nucleic Acids Research, 2007, v. 35, n. 2, p. 704
Publication type:: Article

Non-random, individual-specific methylation profiles are present at the sixth CTCF binding site in the human H19/IGF2 imprinting control region.

Published in:: Nucleic Acids Research, 2007, v. 35, n. 2, p. 701
Publication type:: Article

Genome-wide analyses of retrogenes derived from the human box H/ACA snoRNAs.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 559

By:

Li, Yuping Luo and Siguang

Publication type:

Article

A novel E4BP4 element drives circadian expression of mPeriod2.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 648

By:

Ohno, Tomoya;
Onishi, Yoshiaki;
Ishida, Norio

Publication type:

Article

Influence of cationic molecules on the hairpin to duplex equilibria of self-complementary DNA and RNA oligonucleotides.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 486, doi. 10.1093/nar/gkl1073

By:

Nakano, Shu-ichi;
Kirihata, Toshimasa;
Fujii, Satoshi;
Sakai, Hiroshi;
Kuwahara, Masayasu;
Sawai, Hiroaki;
Sugimoto, Naoki

Publication type:

Article

L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 441, doi. 10.1093/nar/gkl1066

By:

Jonker, Hendrik R. A.;
Ilin, Serge;
Grimm, S. Kaspar;
Wöhnert, Jens;
Schwalbe, Harald

Publication type:

Article

Modulating role of RNA structure in alternative splicing of a critical exon in the spinal muscular atrophy genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 371

By:

Singh, Natalia N.;
Singh, Ravindra N.;
Androphy, Elliot J.

Publication type:

Article

Improved nuclear localization of DNA-binding polyamides.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 363, doi. 10.1093/nar/gkl1042

By:

Nickols, Nicholas G.;
Jacobs, Claire S.;
Farkas, Michelle E.;
Dervan, Peter B.

Publication type:

Article

Flexible segments modulate co-folding of dUTPase and nucleocapsid proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 495

By:

Németh-Pongrácz, Veronika;
Barabás, Orsolya;
Fuxreiter, Mónika;
Simon, István;
Pichová, Iva;
Rumlová, Michalea;
Zábranská, Helena;
Svergun, Dmitri;
Petoukhov, Maxim;
Harmat, Veronika;
Klement, Éva;
Hunyadi-Gulyás, Éva;
Medzihradszky, Katalin F.;
Kónya, Emese;
Vértessy, Beáta G.

Publication type:

Article

Corrigendum.

Published in:: Nucleic Acids Research, 2007, v. 35, n. 2, p. 703
Publication type:: Article

Expression of RAB4B, a protein governing endocytic recycling, is co-regulated with MHC class II genes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 595

By:

Krawczyk, Michal;
Leimgruber, Elisa;
Seguín-Estévez, Queralt;
Dunand-Sauthier, Isabelle;
Barras, Emmanuèle;
Reith, Walter

Publication type:

Article

Development of a species-specific RNA polymerase I-based shRNA expression vector.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e10

By:

Brenz Verca, M. S.;
Weber, Peter;
Mayer, Christine;
Graf, Cornelia;
Refojo, Damián;
Kühn, Ralf;
Grummt, Ingrid;
Lutz, Beat

Publication type:

Article

Two primate-specific small non-protein-coding RNAs in transgenic mice: neuronal expression, subcellular localization and binding partners.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 529

By:

Khanam, Tasneem;
Rozhdestvensky, Timofey S.;
Bundman, Marsha;
Galiveti, Chenna R.;
Handel, Sergej;
Sukonina, Valentina;
Jordan, Ursula;
Brosius, Jürgen;
Skryabin, Boris V.

Publication type:

Article

Encoding folding paths of RNA switches.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 614

By:

Xayaphoummine, A.;
Viasnoff, V.;
Harlepp, S.;
Isambert, H.

Publication type:

Article

Interplay of ‘induced fit’ and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 572

By:

Noeske, Jonas;
Buck, Janina;
Fürtig, Boris;
Nasiri, Hamid R.;
Schwalbe, Harald;
Wöhnert, Jens

Publication type:

Article

Ascorbate acts as a highly potent inducer of chromate mutagenesis and clastogenesis: linkage to DNA breaks in G2 phase by mismatch repair.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 465

By:

Reynolds, Mindy;
Stoddard, Lauren;
Bespalov, Ivan;
Zhitkovich, Anatoly

Publication type:

Article

Nucleus-encoded plastid sigma factor SIG3 transcribes specifically the psbN gene in plastids.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 455, doi. 10.1093/nar/gkl1067

By:

Zghidi, Wafa;
Merendino, Livia;
Cottet, Annick;
Mache, Régis;
Lerbs-Mache, Silva

Publication type:

Article

Dynamic use of multiple parameter sets in sequence alignment.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 678

By:

Huang, Xiaoqiu;
Brutlag, Douglas L.

Publication type:

Article

A pHMM-ANN based discriminative approach to promoter identification in prokaryote genomic contexts.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e12, doi. 10.1093/nar/gkl1024

By:

Mann, Scott;
Li, Jinyan;
Chen, Yi-Ping Phoebe

Publication type:

Article

Structural basis for sequence-dependent DNA cleavage by nonspecific endonucleases.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 584

By:

Wang, Yi-Ting;
Yang, Wei-Jen;
Li, Chia-Lung;
Doudeva, Lyudmila G.;
Yuan, Hanna S.

Publication type:

Article

Selenium derivatization of nucleic acids for crystallography.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 477

By:

Jiang, Jiansheng;
Sheng, Jia;
Carrasco, Nicolas;
Huang, Zhen

Publication type:

Article

Incorporation of 5-fluorouracil into U2 snRNA blocks pseudouridylation and pre-mRNA splicing in vivo.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 550

By:

Zhao, Xinliang;
Yu, Yi-Tao

Publication type:

Article

A semi-automated high-throughput approach to the generation of transposon insertion mutants in the nematode Caenorhabditis elegans.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e11

By:

Duverger, Yohann;
Belougne, Jérôme;
Scaglione, Sarah;
Brandli, Dominique;
Beclin, Christophe;
Ewbank, Jonathan J.

Publication type:

Article

Increasing the sensitivity of DNA microarrays by metal-enhanced fluorescence using surface-bound silver nanoparticles.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e13

By:

Sabanayagam, Chandran R.;
Lakowicz, Joseph R.

Publication type:

Article

Structural diversity of target-specific homopyrimidine peptide nucleic acid–dsDNA complexes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 702

By:

Bentin, Thomas;
Hansen, Georg I.;
Nielsen, Peter E.

Publication type:

Article

Corrigendum.

Published in:: Nucleic Acids Research, 2007, v. 35, n. 2, p. 703
Publication type:: Article

Antisense oligonucleotides containing locked nucleic acid improve potency but cause significant hepatotoxicity in animals.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 687, doi. 10.1093/nar/gkl1071

By:

Swayze, Eric E.;
Siwkowski, Andrew M.;
Wancewicz, Edward V.;
Migawa, Michael T.;
Wyrzykiewicz, Tadeusz K.;
Hung, Gene;
Monia, Brett P.;
Bennett, and C. Frank

Publication type:

Article

The bidirectional promoter of two genes for the mitochondrial translational apparatus in mouse is regulated by an array of CCAAT boxes interacting with the transcription factor NF-Y.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 664, doi. 10.1093/nar/gkl1037

By:

Zanotto, Ernesto;
Shah, Zahid H.;
Jacobs, Howard T.

Publication type:

Article

Association of Dnmt3a and thymine DNA glycosylase links DNA methylation with base-excision repair.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 390, doi. 10.1093/nar/gkl1052

By:

Li, Ya-Qiang;
Zhou, Ping-Zhu;
Zheng, Xiu-Dan;
Walsh, Colum P.;
Xu, Guo-Liang

Publication type:

Article

GISMO—gene identification using a support vector machine for ORF classification.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 540

By:

Krause, Lutz;
McHardy, Alice C.;
Nattkemper, Tim W.;
Pühler, Alfred;
Stoye, Jens;
Meyer, Folker

Publication type:

Article

SECIS elements in the coding regions of selenoprotein transcripts are functional in higher eukaryotes.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 414, doi. 10.1093/nar/gkl1060

By:

Mix, Heiko;
Lobanov, Alexey V.;
Gladyshev, Vadim N.

Publication type:

Article

Reduced splicing efficiency induced by synonymous substitutions may generate a substrate for natural selection of new splicing isoforms: the case of CFTR exon 12.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 606

By:

Raponi, Michela;
Baralle, Francisco E.;
Pagani, Franco

Publication type:

Article

Analysis of the DNA-binding sequence specificity of the archaeal transcriptional regulator Ss-LrpB from Sulfolobus solfataricus by systematic mutagenesis and high resolution contact probing.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 623

By:

Peeters, Eveline;
Wartel, Carine;
Maes, Dominique;
Charlier, Daniel

Publication type:

Article

Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 506

By:

Kim, Jin Sun;
Park, Su Jung;
Kwak, Kyung Jin;
Kim, Yeon Ok;
Kim, Joo Yeol;
Song, Jinkyung;
Jang, Boseung;
Jung, Che-Hun;
Kang, Hunseung

Publication type:

Article

Glucocorticoid-induced leucine zipper (GILZ)/NF-κB interaction: role of GILZ homo-dimerization and C-terminal domain.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 517

By:

Marco, Barbara Di;
Massetti, Michela;
Bruscoli, Stefano;
Macchiarulo, Antonio;
Virgilio, Rosa Di;
Velardi, Enrico;
Donato, Valerio;
Migliorati, Graziella;
Riccardi, Carlo

Publication type:

Article

High sensitivity RNA pseudoknot prediction.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 656, doi. 10.1093/nar/gkl943

By:

Huang, Xiaolu;
Ali, Hesham

Publication type:

Article

Positional artifacts in microarrays: experimental verification and construction of COP, an automated detection tool.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e8

By:

Yu, Haiyuan;
Nguyen, Katherine;
Royce, Tom;
Qian, Jiang;
Nelson, Kenneth;
Snyder, Michael;
Gerstein, Mark

Publication type:

Article

G-quadruplexes in promoters throughout the human genome.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 406, doi. 10.1093/nar/gkl1057

By:

Huppert, Julian L.;
Balasubramanian, Shankar

Publication type:

Article

More complete gene silencing by fewer siRNAs: transparent optimized design and biophysical signature.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 433

By:

Ladunga, Istvan

Publication type:

Article

Role of Elg1 protein in double strand break repair.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. 353

By:

Ogiwara, Hideaki;
Ui, Ayako;
Enomoto, Takemi;
Seki, Masayuki

Publication type:

Article

Human RAD18 is involved in S phase-specific single-strand break repair without PCNA monoubiquitination.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 2, p. e9

By:

Shiomi, Naoko;
Mori, Masahiko;
Tsuji, Hideo;
Imai, Takashi;
Inoue, Hirokazu;
Tateishi, Satoshi;
Yamaizumi, Masaru;
Shiomi, Tadahiro

Publication type:

Article