Works matching IS 03051048 AND DT 2007 AND VI 35 AND IP 19

Results: 39

Comparison of multiple DNA dyes for real-time PCR: effects of dye concentration and sequence composition on DNA amplification and melting temperature.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e127, doi. 10.1093/nar/gkm671

By:

Gudnason, Haukur;
Dufva, Martin;
Bang, D.D.;
Wolff, Anders

Publication type:

Article

Cre reconstitution allows for DNA recombination selectively in dual-marker-expressing cells in transgenic mice.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e126

By:

Xu, Yanwen;
Xu, Gang;
Liu, Bindong;
Gu, Guoqiang

Publication type:

Article

Crystal structure, stability and in vitro RNAi activity of oligoribonucleotides containing the ribo-difluorotoluyl nucleotide: insights into substrate requirements by the human RISC Ago2 enzyme.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6424, doi. 10.1093/nar/gkm664

By:

Li, Feng;
Pallan, Pradeep S.;
Maier, Martin A.;
Rajeev, Kallanthottathil G.;
Mathieu, Steven L.;
Kreutz, Christoph;
Fan, Yupeng;
Sanghvi, Jayodita;
Micura, Ronald;
Rozners, Eriks;
Manoharan, Muthiah;
Egli, Martin

Publication type:

Article

Escherichia coli HU protein has a role in the repair of abasic sites in DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6672, doi. 10.1093/nar/gkm567

By:

Kow, Yoke W.;
Imhoff, Barry;
Weiss, Bernard;
Hung, David C. I.;
Hindoyan, Antreas A.;
Story, Randall M.;
Goodman, Steven D.

Publication type:

Article

Antisense artifacts in transcriptome microarray experiments are resolved by actinomycin D.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e128, doi. 10.1093/nar/gkm683

By:

Perocchi, Fabiana;
Xu, Zhenyu;
Clauder-Münster, Sandra;
Steinmetz, Lars M.

Publication type:

Article

The restriction endonuclease R.NmeDI from Neisseria meningitidis that recognizes a palindromic sequence and cuts the DNA on both sides of the recognition sequence.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6539, doi. 10.1093/nar/gkm702

By:

Kwiatek, Agnieszka;
Piekarowicz, Andrzej

Publication type:

Article

Multiple conserved regulatory elements with overlapping functions determine Sox10 expression in mouse embryogenesis.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6526, doi. 10.1093/nar/gkm727

By:

Werner, Torsten;
Hammer, Alexander;
Wahlbuhl, Mandy;
Bösl, Michael R.;
Wegner, Michael

Publication type:

Article

Different genetic requirements for repair of replication-born double-strand breaks by sister-chromatid recombination and break-induced replication.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6560, doi. 10.1093/nar/gkm488

By:

Cortés-Ledesma, Felipe;
Tous, Cristina;
Aguilera, Andrés

Publication type:

Article

Organismal complexity, cell differentiation and gene expression: human over mouse.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6350, doi. 10.1093/nar/gkm723

By:

Vinogradov, Alexander E.;
Anatskaya, Olga V.

Publication type:

Article

Subcellular distribution of human RDM1 protein isoforms and their nucleolar accumulation in response to heat shock and proteotoxic stress.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6571, doi. 10.1093/nar/gkm753

By:

Messaoudi, Lydia;
Yang, Yun-Gui;
Kinomura, Aiko;
Stavreva, Diana A.;
Yan, Gonghong;
Bortolin-Cavaillé, Marie-Line;
Arakawa, Hiroshi;
Buerstedde, Jean-Marie;
Hainaut, Pierre;
Cavaillé, Jérome;
Takata, Minoru;
Van Dyck, Eric

Publication type:

Article

A pyrosequencing-tailored nucleotide barcode design unveils opportunities for large-scale sample multiplexing.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e130, doi. 10.1093/nar/gkm760

By:

Parameswaran, Poornima;
Jalili, Roxana;
Tao, Li;
Shokralla, Shadi;
Gharizadeh, Baback;
Ronaghi, Mostafa;
Fire, Andrew Z.

Publication type:

Article

Interactions between subunits of Saccharomyces cerevisiae RNase MRP support a conserved eukaryotic RNase P/MRP architecture.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6439, doi. 10.1093/nar/gkm553

By:

Aspinall, Tanya V.;
Gordon, James M.B.;
Bennett, Hayley J.;
Karahalios, Panagiotis;
Bukowski, John-Paul;
Walker, Scott C.;
Engelke, David R.;
Avis, Johanna M.

Publication type:

Article

LATERAL ORGAN BOUNDARIES defines a new family of DNA-binding transcription factors and can interact with specific bHLH proteins.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6663, doi. 10.1093/nar/gkm775

By:

Husbands, Aman;
Bell, Elizabeth M.;
Shuai, Bin;
Smith, Harley M.S.;
Springer, Patricia S.

Publication type:

Article

Telomere dynamics and fusion of critically shortened telomeres in plants lacking DNA ligase IV.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6490, doi. 10.1093/nar/gkm472

By:

Heacock, Michelle L.;
Idol, Rachel A.;
Friesner, Joanna D.;
Britt, Anne B.;
Shippen, Dorothy E.

Publication type:

Article

Phosphorylated serine 28 of histone H3 is associated with destabilized nucleosomes in transcribed chromatin.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6640, doi. 10.1093/nar/gkm737

By:

Sun, Jian-Min;
Chen, Hou Yu;
Espino, Paula S.;
Davie, James R.

Publication type:

Article

In vitro selection and characterization of cellulose-binding DNA aptamers.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6378, doi. 10.1093/nar/gkm708

By:

Boese, Benjamin J.;
Breaker, Ronald R.

Publication type:

Article

Ultrasound-mediated DNA transfer for bacteria.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e129, doi. 10.1093/nar/gkm710

By:

Song, Yizhi;
Hahn, Thomas;
Thompson, Ian P.;
Mason, Timothy J.;
Preston, Gail M.;
Li, Guanghe;
Paniwnyk, Larysa;
Huang, Wei E.

Publication type:

Article

Telomeric co-localization of the modified base J and contingency genes in the protozoan parasite Trypanosoma cruzi.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6367, doi. 10.1093/nar/gkm693

By:

Ekanayake, Dilrukshi K.;
Cipriano, Michael J.;
Sabatini, Robert

Publication type:

Article

Molecular cloning and characterization of the human RNase κ, an ortholog of Cc RNase.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6389, doi. 10.1093/nar/gkm718

By:

Economopoulou, Marie-angela I.;
Fragoulis, Emmanouel G.;
Sideris, Diamantis C.

Publication type:

Article

The eukaryotic leading and lagging strand DNA polymerases are loaded onto primer-ends via separate mechanisms but have comparable processivity in the presence of PCNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6588, doi. 10.1093/nar/gkm741

By:

Chilkova, Olga;
Stenlund, Peter;
Isoz, Isabelle;
Stith, Carrie M.;
Grabowski, Pawel;
Lundström, Else-Britt;
Burgers, Peter M.;
Johansson, Erik

Publication type:

Article

The ePHD protein SPBP interacts with TopBP1 and together they co-operate to stimulate Ets1-mediated transcription.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6648, doi. 10.1093/nar/gkm739

By:

Sjøttem, Eva;
Rekdal, Cecilie;
Svineng, Gunbjørg;
Johnsen, Sylvia Sagen;
Klenow, Helle;
Uglehus, Rebecca Dale;
Johansen, Terje

Publication type:

Article

In vivo construction of recombinant molecules within the Caenorhabditis elegans germ line using short regions of terminal homology.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e133, doi. 10.1093/nar/gkm857

By:

Kemp, Benedict J.;
Hatzold, Julia;
Sternick, Laura A.;
Cornman-Homonoff, Joshua;
Whitaker, Jessica M.;
Tieu, Pamela J.;
Lambie, Eric J.

Publication type:

Article

Generation of a transgenic zebrafish model of Tauopathy using a novel promoter element derived from the zebrafish eno2 gene.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6501, doi. 10.1093/nar/gkm608

By:

Bai, Qing;
Garver, Jessica A.;
Hukriede, Neil A.;
Burton, Edward A.

Publication type:

Article

A novel method for poly(A) fractionation reveals a large population of mRNAs with a short poly(A) tail in mammalian cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e132, doi. 10.1093/nar/gkm830

By:

Meijer, Hedda A.;
Bushell, Martin;
Hill, Kirsti;
Gant, Timothy W.;
Willis, Anne E.;
Jones, Peter;
de Moor, Cornelia H.

Publication type:

Article

Backbone-base inclination as a fundamental determinant of nucleic acid self- and cross-pairing.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6611, doi. 10.1093/nar/gkm612

By:

Pallan, Pradeep S.;
Lubini, Paolo;
Bolli, Martin;
Egli, Martin

Publication type:

Article

Papillomavirus E1 helicase assembly maintains an asymmetric state in the absence of DNA and nucleotide cofactors.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6451, doi. 10.1093/nar/gkm705

By:

Sanders, Cyril M.;
Kovalevskiy, Oleg V.;
Sizov, Dmytro;
Lebedev, Andrey A.;
Isupov, Michail N.;
Antson, Alfred A.

Publication type:

Article

An RNA toolbox for single-molecule force spectroscopy studies.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6625, doi. 10.1093/nar/gkm585

By:

Vilfan, Igor D.;
Kamping, Wiecher;
van den Hout, Michiel;
Candelli, Andrea;
Hage, Susanne;
Dekker, Nynke H.

Publication type:

Article

FLAG assay as a novel method for real-time signal generation during PCR: application to detection and genotyping of KRAS codon 12 mutations.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e131, doi. 10.1093/nar/gkm809

By:

Amicarelli, Giulia;
Shehi, Erlet;
Makrigiorgos, G. Mike;
Adlerstein, Daniel

Publication type:

Article

Reduced levels of Ago2 expression result in increased siRNA competition in mammalian cells.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6598, doi. 10.1093/nar/gkm663

By:

Vickers, Timothy A.;
Lima, Walt F.;
Nichols, Josh G.;
Crooke, Stanley T.

Publication type:

Article

A hexanucleotide sequence (dC1–dC6 tract) restricts the dC-specific cleavage of single-stranded DNA by endonuclease IV of bacteriophage T4.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6681, doi. 10.1093/nar/gkm721

By:

Ohshima, Hiroyuki;
Hirano, Nobutaka;
Takahashi, Hideo

Publication type:

Article

Translation of non-capped mRNAs in a eukaryotic cell-free system: acceleration of initiation rate in the course of polysome formation.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6547, doi. 10.1093/nar/gkm725

By:

Alekhina, Olga M.;
Vassilenko, Konstantin S.;
Spirin, Alexander S.

Publication type:

Article

Identification of key structural determinants of the IntI1 integron integrase that influence attC × attI1 recombination efficiency.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6475, doi. 10.1093/nar/gkm709

By:

Demarre, Gaëlle;
Frumerie, Clara;
Gopaul, Deshmukh N.;
Mazel, Didier

Publication type:

Article

Human ribosomal protein S13 regulates expression of its own gene at the splicing step by a feedback mechanism.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6414, doi. 10.1093/nar/gkm701

By:

Malygin, Alexey A.;
Parakhnevitch, Natalia M.;
Ivanov, Anton V.;
Eperon, Ian C.;
Karpova, Galina G.

Publication type:

Article

The mitochondrial transcription termination factor mTERF modulates replication pausing in human mitochondrial DNA.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6458, doi. 10.1093/nar/gkm676

By:

Hyvärinen, Anne K.;
Pohjoismäki, Jaakko L. O.;
Reyes, Aurelio;
Wanrooij, Sjoerd;
Yasukawa, Takehiro;
Karhunen, Pekka J.;
Spelbrink, Johannes N.;
Holt, Ian J.;
Jacobs, Howard T.

Publication type:

Article

Global control of aberrant splice-site activation by auxiliary splicing sequences: evidence for a gradient in exon and intron definition.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6399

By:

Královičová, Jana;
Vořechovský, Igor

Publication type:

Article

The role of peptide motifs in the evolution of a protein network.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6357, doi. 10.1093/nar/gkm692

By:

Saito, Hirohide;
Kashida, Shunnichi;
Inoue, Tan;
Shiba, Kiyotaka

Publication type:

Article

Direct observation of the reversible unwinding of a single DNA molecule caused by the intercalation of ethidium bromide.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. e125, doi. 10.1093/nar/gkm529

By:

Hayashi, Masahito;
Harada, Yoshie

Publication type:

Article

Termination of DNA synthesis by N6-alkylated, not 3′-O-alkylated, photocleavable 2′-deoxyadenosine triphosphates.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6339, doi. 10.1093/nar/gkm689

By:

Wu, Weidong;
Stupi, Brian P.;
Litosh, Vladislav A.;
Mansouri, Dena;
Farley, Demetra;
Morris, Sidney;
Metzker, Sherry;
Metzker, Michael L.

Publication type:

Article

Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution†.

Published in:

Nucleic Acids Research, 2007, v. 35, n. 19, p. 6517, doi. 10.1093/nar/gkm706

By:

Phan, Anh Tuân;
Kuryavyi, Vitaly;
Luu, Kim Ngoc;
Patel, Dinshaw J.

Publication type:

Article