Works matching IS 03051048 AND DT 2005 AND VI 33 AND IP 20

Results: 31

Multiplexed tandem PCR: gene profiling from small amounts of RNA using SYBR Green detection.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e180, doi. 10.1093/nar/gni182

By:

Stanley, Keith K.;
Szewczuk, Elektra

Publication type:

Article

Footprinting of mammalian promoters: use of a CpG DNA methyltransferase revealing nucleosome positions at a single molecule level.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e176, doi. 10.1093/nar/gni180

By:

Fatemi, Mehrnaz;
Pao, Martha M.;
Jeong, Shinwu;
Gal-Yam, Einav Nili;
Egger, Gerda;
Weisenberger, Daniel J.;
Jones, Peter A.

Publication type:

Article

Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e175, doi. 10.1093/nar/gni179

By:

Dai, Manhong;
Wang, Pinglang;
Boyd, Andrew D.;
Kostov, Georgi;
Athey, Brian;
Jones, Edward G.;
Bunney, William E.;
Myers, Richard M.;
Speed, Terry P.;
Akil, Huda;
Watson, Stanley J.;
Meng, Fan

Publication type:

Article

Real-time quantification of microRNAs by stem–loop RT–PCR.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e179, doi. 10.1093/nar/gni178

By:

Chen, Caifu;
Ridzon, Dana A.;
Broomer, Adam J.;
Zhou, Zhaohui;
Lee, Danny H.;
Nguyen, Julie T.;
Barbisin, Maura;
Xu, Nan Lan;
Mahuvakar, Vikram R.;
Andersen, Mark R.;
Lao, Kai Qin;
Livak, Kenneth J.;
Guegler, Karl J.

Publication type:

Article

PCR inhibition by reverse transcriptase leads to an overestimation of amplification efficiency.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e181, doi. 10.1093/nar/gni176

By:

Suslov, Oleg;
Steindler, Dennis A.

Publication type:

Article

In vivo selection of engineered homing endonucleases using double-strand break induced homologous recombination.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e178, doi. 10.1093/nar/gni175

By:

Chames, Patrick;
Epinat, Jean-Charles;
Guillier, Sophie;
Patin, Amélie;
Lacroix, Emmanuel;
Pâques, Frédéric

Publication type:

Article

Bis-aptazyme sensors for hepatitis C virus replicase and helicase without blank signal.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e177, doi. 10.1093/nar/gni174

By:

Cho, Suhyung;
Kim, Ji-Eun;
Lee, Bo-Rahm;
Kim, June-Hyung;
Kim, Byung-Gee

Publication type:

Article

Towards systematic identification of Plasmodium essential genes by transposon shuttle mutagenesis.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. e174, doi. 10.1093/nar/gni173

By:

Sakamoto, Hiroshi;
Thiberge, Sabine;
Akerman, Susan;
Janse, Chris J.;
Carvalho, Teresa Gil;
Ménard, Robert

Publication type:

Article

AP endonuclease deficiency results in extreme sensitivity to thymidine deprivation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6644, doi. 10.1093/nar/gki975

By:

Dornfeld, Ken;
Johnson, Monika

Publication type:

Article

DNA end-directed and processive nuclease activities of the archaeal XPF enzyme.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6662, doi. 10.1093/nar/gki974

By:

Roberts, Jennifer A.;
White, Malcolm F.

Publication type:

Article

The PSEA promoter element of the Drosophila U1 snRNA gene is sufficient to bring DmSNAPc into contact with 20 base pairs of downstream DNA.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6579, doi. 10.1093/nar/gki972

By:

Lai, Hsien-Tsung;
Chen, Hsiang;
Li, Cheng;
McNamara-Schroeder, Kathleen J.;
Stumph, William E.

Publication type:

Article

Structure-specific binding of MeCP2 to four-way junction DNA through its methyl CpG-binding domain.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6603, doi. 10.1093/nar/gki971

By:

Galvão, Teca Calcagno;
Thomas, Jean O.

Publication type:

Article

The excess of 5′ introns in eukaryotic genomes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6522, doi. 10.1093/nar/gki970

By:

Lin, Kui;
Zhang, Da-Yong

Publication type:

Article

A retrocopy of a gene can functionally displace the source gene in evolution.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6654, doi. 10.1093/nar/gki969

By:

Krasnov, Aleksey N.;
Kurshakova, Maria M.;
Ramensky, Vasily E.;
Mardanov, Pavel V.;
Nabirochkina, Elena N.;
Georgieva, Sofia G.

Publication type:

Article

A thermodynamic model of transcriptome formation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6587, doi. 10.1093/nar/gki967

By:

Konishi, Tomokazu

Publication type:

Article

SIP1/ZEB2 induces EMT by repressing genes of different epithelial cell–cell junctions.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6566, doi. 10.1093/nar/gki965

By:

Vandewalle, Cindy;
Comijn, Joke;
De Craene, Bram;
Vermassen, Petra;
Bruyneel, Erik;
Andersen, Henriette;
Tulchinsky, Eugene;
Van Roy, Frans;
Berx, Geert

Publication type:

Article

Human Bex2 interacts with LMO2 and regulates the transcriptional activity of a novel DNA-binding complex.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6555, doi. 10.1093/nar/gki964

By:

Han, Chunyu;
Liu, Hao;
Liu, Jin;
Yin, Kang;
Xie, Yi;
Shen, Xiao;
Wang, Yong;
Yuan, Jiangang;
Qiang, Boqing;
Liu, Yong-Jian;
Peng, Xiaozhong

Publication type:

Article

Synthesis of novel poly(dG)–poly(dG)–poly(dC) triplex structure by Klenow exo− fragment of DNA polymerase I.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6515, doi. 10.1093/nar/gki963

By:

Kotlyar, Alexander;
Borovok, Natalia;
Molotsky, Tatiana;
Klinov, Dmitry;
Dwir, Benjamin;
Kapon, Eli

Publication type:

Article

The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6507, doi. 10.1093/nar/gki962

By:

Nolivos, Sophie;
Carpousis, Agamemnon J.;
Clouet-d'Orval, Béatrice

Publication type:

Article

Chimeric peptide nucleic acid compounds modulate splicing of the bcl-x gene in vitro and in vivo.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6547, doi. 10.1093/nar/gki960

By:

Wilusz, Jeremy E.;
Devanney, Sean C.;
Caputi, Massimo

Publication type:

Article

A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6635, doi. 10.1093/nar/gki959

By:

Mercier, G.;
Berthault, N.;
Touleimat, N.;
Képès, F.;
Fourel, G.;
Gilson, E.;
Dutreix, M.

Publication type:

Article

A second look at cellular mRNA sequences said to function as internal ribosome entry sites.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6593, doi. 10.1093/nar/gki958

By:

Kozak, Marilyn

Publication type:

Article

Role of the Bombyx mori R2 element N-terminal domain in the target-primed reverse transcription (TPRT) reaction.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6461, doi. 10.1093/nar/gki957

By:

Christensen, Shawn M.;
Bibillo, Arkadiusz;
Eickbush, Thomas H.

Publication type:

Article

Activation of Sp1-mediated transcription by Rta of Epstein–Barr virus via an interaction with MCAF1.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6528, doi. 10.1093/nar/gki956

By:

Chang, Li-Kwan;
Chung, Jian-Ying;
Hong, Yi-Ren;
Ichimura, Takaya;
Nakao, Mitsuyoshi;
Liu, Shih-Tung

Publication type:

Article

Abundance of correctly folded RNA motifs in sequence space, calculated on computational grids.

Published in:: Nucleic Acids Research, 2005, v. 33, n. 20, p. 6671, doi. 10.1093/nar/gki955
Publication type:: Article

Long-oligomer microarray profiling in Neurospora crassa reveals the transcriptional program underlying biochemical and physiological events of conidial germination.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6469, doi. 10.1093/nar/gki953

By:

Kasuga, Takao;
Townsend, Jeffrey P.;
Tian, Chaoguang;
Gilbert, Luz B.;
Mannhaupt, Gertrud;
Taylor, John W.;
Glass, N. Louise

Publication type:

Article

StpA protein from Escherichia coli condenses supercoiled DNA in preference to linear DNA and protects it from digestion by DNase I and EcoKI.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6540, doi. 10.1093/nar/gki951

By:

Keatch, S. A.;
Leonard, P. G.;
Ladbury, J. E.;
Dryden, D. T. F.

Publication type:

Article

Kernel-based machine learning protocol for predicting DNA-binding proteins.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6486, doi. 10.1093/nar/gki949

By:

Bhardwaj, Nitin;
Langlois, Robert E.;
Zhao, Guijun;
Lu, Hui

Publication type:

Article

Minimal pre-mRNA substrates with natural and converted sites for full-round U insertion and U deletion RNA editing in trypanosomes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6610, doi. 10.1093/nar/gki943

By:

Cifuentes-Rojas, Catherine;
Halbig, Kari;
Sacharidou, Anastasia;
De Nova-Ocampo, Monica;
Cruz-Reyes, Jorge

Publication type:

Article

Gene identification in novel eukaryotic genomes by self-training algorithm.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6494, doi. 10.1093/nar/gki937

By:

Lomsadze, Alexandre;
Ter-Hovhannisyan, Vardges;
Chernoff, Yury O.;
Borodovsky, Mark

Publication type:

Article

Rotation of DNA around intact strand in human topoisomerase I implies distinct mechanisms for positive and negative supercoil relaxation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 20, p. 6621, doi. 10.1093/nar/gki935

By:

Sari, Levent;
Andricioaei, Ioan

Publication type:

Article