Works matching IS 03051048 AND DT 2005 AND VI 33 AND IP 19

Results: 46

Parameters determining the efficiency of gene targeting in the moss Physcomitrella patens.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e173, doi. 10.1093/nar/gni172

By:

Kamisugi, Yasuko;
Cuming, Andrew C.;
Cove, David J.

Publication type:

Article

In vitro non-viral gene delivery with nanofibrous scaffolds.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e170, doi. 10.1093/nar/gni171

By:

Liang, Dehai;
Luu, Yen K.;
Kim, Kwangsok;
Hsiao, Benjamin S.;
Hadjiargyrou, Michael;
Chu, Benjamin

Publication type:

Article

An analysis of the feasibility of short read sequencing.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e171, doi. 10.1093/nar/gni170

By:

Whiteford, Nava;
Haslam, Niall;
Weber, Gerald;
Prügel-Bennett, Adam;
Essex, Jonathan W.;
Roach, Peter L.;
Bradley, Mark;
Neylon, Cameron

Publication type:

Article

A method to find tissue-specific novel sites of selective adenosine deamination.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e167, doi. 10.1093/nar/gni169

By:

Ohlson, Johan;
Ensterö, Mats;
Sjöberg, Britt-Marie;
Öhman, Marie

Publication type:

Article

A new generation of vectors with increased induction ratios by overimposing a second regulatory level by attenuation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e169, doi. 10.1093/nar/gni168

By:

Royo, Jose Luis;
Manyani, Hamid;
Cebolla, Angel;
Santero, Eduardo

Publication type:

Article

Protocols for the assurance of microarray data quality and process control.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e172, doi. 10.1093/nar/gni167

By:

Burgoon, L. D.;
Eckel-Passow, J. E.;
Gennings, C.;
Boverhof, D. R.;
Burt, J. W.;
Fong, C. J.;
Zacharewski, T. R.

Publication type:

Article

Two-photon fluorescence cross-correlation spectroscopy as a potential tool for high-throughput screening of DNA repair activity.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e165, doi. 10.1093/nar/gni166

By:

Collini, Maddalena;
Caccia, Michele;
Chirico, Giuseppe;
Barone, Flavia;
Dogliotti, Eugenia;
Mazzei, Filomena

Publication type:

Article

A colorimetric method for point mutation detection using high-fidelity DNA ligase.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e168

By:

Li, Jishan;
Chu, Xia;
Liu, Yali;
Jiang, Jian-Hui;
He, Zhimin;
Zhang, Zhiwei;
Shen, Guoli;
Yu, Ru-Qin

Publication type:

Article

Position of the fluorescent label is a crucial factor determining signal intensity in microarray hybridizations.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. e166, doi. 10.1093/nar/gni156

By:

Zhang, Lei;
Hurek, Thomas;
Reinhold-Hurek, Barbara

Publication type:

Article

Genome dynamics and diversity of Shigella species, the etiologic agents of bacillary dysentery.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6445, doi. 10.1093/nar/gki954

By:

Yang, Fan;
Yang, Jian;
Zhang, Xiaobing;
Chen, Lihong;
Jiang, Yan;
Yan, Yongliang;
Tang, Xudong;
Wang, Jing;
Xiong, Zhaohui;
Dong, Jie;
Xue, Ying;
Zhu, Yafang;
Xu, Xingye;
Sun, Lilian;
Chen, Shuxia;
Nie, Huan;
Peng, Junping;
Xu, Jianguo;
Wang, Yu;
Yuan, Zhenghong

Publication type:

Article

Silencing of retrotransposons in Dictyostelium by DNA methylation and RNAi.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6405, doi. 10.1093/nar/gki952

By:

Kuhlmann, Markus;
Borisova, Branimira E.;
Kaller, Markus;
Larsson, Pontus;
Stach, Dirk;
Na, Jianbo;
Eichinger, Ludwig;
Lyko, Frank;
Ambros, Victor;
Söderbom, Fredrik;
Hammann, Christian;
Nellen, Wolfgang

Publication type:

Article

FOB1 affects DNA topoisomerase I in vivo cleavages in the enhancer region of the Saccharomyces cerevisiae ribosomal DNA locus.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6327, doi. 10.1093/nar/gki950

By:

Di Felice, Francesca;
Cioci, Francesco;
Camilloni, Giorgio

Publication type:

Article

Human AP endonuclease suppresses DNA mismatch repair activity leading to microsatellite instability.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6460, doi. 10.1093/nar/gki948

By:

Chang, In-Youb;
Kim, Soo-Hyun;
Cho, Hyun-Ju;
Lee, Do Young;
Kim, Mi-Hwa;
Chung, Myung-Hee;
You, Ho Jin

Publication type:

Article

The POU protein Oct-6 is a nucleocytoplasmic shuttling protein.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6277, doi. 10.1093/nar/gki947

By:

Baranek, Constanze;
Sock, Elisabeth;
Wegner, Michael

Publication type:

Article

Tracking of microinjected DNA in live cells reveals the intracellular behavior and elimination of extrachromosomal genetic material.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6296, doi. 10.1093/nar/gki946

By:

Shimizu, Noriaki;
Kamezaki, Fumie;
Shigematsu, Shiho

Publication type:

Article

Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6435, doi. 10.1093/nar/gki945

By:

Meka, Hedije;
Werner, Finn;
Cordell, Suzanne C.;
Onesti, Silvia;
Brick, Peter

Publication type:

Article

Pyrimido[1,2-a]-purin-10(3H)-one, M1G, is less prone to artifact than base oxidation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6426, doi. 10.1093/nar/gki944

By:

Jeong, Yo-Chan;
Nakamura, Jun;
Upton, Patricia B.;
Swenberg, James A.

Publication type:

Article

Shared RNA-binding sites for interacting members of the Drosophila ELAV family of neuronal proteins.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6372, doi. 10.1093/nar/gki942

By:

Borgeson, Claudia D.;
Samson, Marie-Laure

Publication type:

Article

Duplication processes in Saccharomyces cerevisiae haploid strains.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6319, doi. 10.1093/nar/gki941

By:

Schacherer, Joseph;
de Montigny, Jacky;
Welcker, Anne;
Souciet, Jean-Luc;
Potier, Serge

Publication type:

Article

T:G mismatch-specific thymine-DNA glycosylase (TDG) as a coregulator of transcription interacts with SRC1 family members through a novel tyrosine repeat motif.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6393, doi. 10.1093/nar/gki940

By:

Lucey, Marie J.;
Chen, Dongsheng;
Lopez-Garcia, Jorge;
Hart, Stephen M.;
Phoenix, Fladia;
Al-Jehani, Rajai;
Alao, John P.;
White, Roger;
Kindle, Karin B.;
Losson, Régine;
Chambon, Pierre;
Parker, Malcolm G.;
Schär, Primo;
Heery, David M.;
Buluwela, Lakjaya;
Ali, Simak

Publication type:

Article

Binding of the Bacillus subtilis LexA protein to the SOS operator.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6287, doi. 10.1093/nar/gki939

By:

Groban, Eli S.;
Johnson, Martha B.;
Banky, Poopak;
Burnett, Peta-Gaye G.;
Calderon, Georgina L.;
Dwyer, Erica C.;
Fuller, Shakierah N.;
Gebre, Biniam;
King, Leah M.;
Sheren, Ila N.;
Von Mutius, Lindi D.;
O'Gara, Thomas M.;
Lovett, Charles M.

Publication type:

Article

DNA damage and replication stress induced transcription of RNR genes is dependent on the Ccr4–Not complex.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6384, doi. 10.1093/nar/gki938

By:

Mulder, Klaas W.;
Winkler, G. Sebastiaan;
Timmers, H. Th. Marc

Publication type:

Article

A coarse graining approach to determine nucleic acid structures from small angle neutron scattering profiles in solution.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6361, doi. 10.1093/nar/gki936

By:

Zhou, J.;
Krueger, S.;
Gregurick, S. K.

Publication type:

Article

Structure–function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6349, doi. 10.1093/nar/gki934

By:

Khalid, M. Fahad;
Damha, Masad J.;
Shuman, Stewart;
Schwer, Beate

Publication type:

Article

End invasion of peptide nucleic acids (PNAs) with mixed-base composition into linear DNA duplexes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6459, doi. 10.1093/nar/gki933

By:

Smolina, Irina V.;
Demidov, Vadim V.;
Soldatenkov, Viatcheslav A.;
Chasovskikh, Sergey G.;
Frank-Kamenetskii, Maxim D.

Publication type:

Article

SegH and Hef: two novel homing endonucleases whose genes replace the mobC and mobE genes in several T4-related phages.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6203, doi. 10.1093/nar/gki932

By:

Sandegren, Linus;
Nord, David;
Sjöberg, Britt-Marie

Publication type:

Article

Farm animal genomics and informatics: an update.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6308, doi. 10.1093/nar/gki931

By:

Fadiel, Ahmed;
Anidi, Ifeanyi;
Eichenbaum, Kenneth D.

Publication type:

Article

In vitro selection, characterization, and application of deoxyribozymes that cleave RNA.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6151, doi. 10.1093/nar/gki930

By:

Silverman, Scott K.

Publication type:

Article

Identification of RecQL1 as a Holliday junction processing enzyme in human cell lines.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6251, doi. 10.1093/nar/gki929

By:

LeRoy, Gary;
Carroll, Robert;
Kyin, Saw;
Seki, Masayuki;
Cole, Michael D.

Publication type:

Article

Detection of low-level promoter activity within open reading frame sequences of Escherichia coli.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6268, doi. 10.1093/nar/gki928

By:

Kawano, Mitsuoki;
Storz, Gisela;
Rao, B. Sridhar;
Rosner, Judah L.;
Martin, Robert G.

Publication type:

Article

Invariant amino acids essential for decoding function of polypeptide release factor eRF1.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6418, doi. 10.1093/nar/gki927

By:

Kolosov, Petr;
Frolova, Ludmila;
Seit-Nebi, Alim;
Dubovaya, Vera;
Kononenko, Artem;
Oparina, Nina;
Justesen, Just;
Efimov, Alexandr;
Kisselev, Lev

Publication type:

Article

Mutagenic effects of abasic and oxidized abasic lesions in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6196, doi. 10.1093/nar/gki926

By:

Kow, Yoke W.;
Bao, Gaobin;
Minesinger, Brenda;
Jinks-Robertson, Sue;
Siede, Wolfram;
Jiang, Yu Lin;
Greenberg, Marc M.

Publication type:

Article

Structural dynamics of cereal mitochondrial genomes as revealed by complete nucleotide sequencing of the wheat mitochondrial genome.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6235, doi. 10.1093/nar/gki925

By:

Ogihara, Yasunari;
Yamazaki, Yukiko;
Murai, Koji;
Kanno, Akira;
Terachi, Toru;
Shiina, Takashi;
Miyashita, Naohiko;
Nasuda, Shuhei;
Nakamura, Chiharu;
Mori, Naoki;
Takumi, Shigeo;
Murata, Minoru;
Futo, Satoshi;
Tsunewaki, Koichiro

Publication type:

Article

8-Methyl-2′-deoxyguanosine incorporation into parallel DNA quadruplex structures.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6188, doi. 10.1093/nar/gki924

By:

Virgilio, Antonella;
Esposito, Veronica;
Randazzo, Antonio;
Mayol, Luciano;
Galeone, Aldo

Publication type:

Article

Statistical evidence for conserved, local secondary structure in the coding regions of eukaryotic mRNAs and pre-mRNAs.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6338, doi. 10.1093/nar/gki923

By:

Meyer, Irmtraud M.;
Miklós, István

Publication type:

Article

Rearranging the centromere of the human Y chromosome with ϕC31 integrase.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6101, doi. 10.1093/nar/gki922

By:

Malla, Sunir;
Dafhnis-Calas, Felix;
Brookfield, John F. Y.;
Smith, Margaret C. M.;
Brown, William R. A.

Publication type:

Article

A single catalytic domain of the junction-resolving enzyme T7 endonuclease I is a non-specific nicking endonuclease.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6225, doi. 10.1093/nar/gki921

By:

Guan, Chudi;
Kumar, Sanjay

Publication type:

Article

Transgene-induced CCWGG methylation does not alter CG methylation patterning in human kidney cells.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6124, doi. 10.1093/nar/gki920

By:

Shevchuk, Taras;
Kretzner, Leo;
Munson, Kristofer;
Axume, John;
Clark, Jarrod;
Dyachenko, Olga V.;
Caudill, Marie;
Buryanov, Yaroslav;
Smith, Steven S.

Publication type:

Article

Binding of herpes simplex virus-1 US11 to specific RNA sequences.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6090, doi. 10.1093/nar/gki919

By:

Bryant, Kevin F.;
Cox, J. Colin;
Wang, Hongming;
Hogle, James M.;
Ellington, Andrew D.;
Coen, Donald M.

Publication type:

Article

Nearest-neighbor thermodynamics of deoxyinosine pairs in DNA duplexes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6258, doi. 10.1093/nar/gki918

By:

Watkins, Norman E.;
SantaLucia, John

Publication type:

Article

Role of stacking interactions in the binding sequence preferences of DNA bis-intercalators: insight from thermodynamic integration free energy simulations.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6214, doi. 10.1093/nar/gki916

By:

Marco, Esther;
Negri, Ana;
Luque, F. Javier;
Gago, Federico

Publication type:

Article

Information theory based T7-like promoter models: classification of bacteriophages and differential evolution of promoters and their polymerases.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6172, doi. 10.1093/nar/gki915

By:

Chen, Zehua;
Schneider, Thomas D.

Publication type:

Article

Selection of optimal oligonucleotide probes for microarrays using multiple criteria, global alignment and parameter estimation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6114

By:

Li, Xingyuan;
He, Zhili;
Zhou, Jizhong

Publication type:

Article

Correlation between sequence conservation and the genomic context after gene duplication.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6164, doi. 10.1093/nar/gki913

By:

Notebaart, Richard A.;
Huynen, Martijn A.;
Teusink, Bas;
Siezen, Roland J.;
Snel, Berend

Publication type:

Article

In vivo and in vitro studies of Mgs1 suggest a link between genome instability and Okazaki fragment processing.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6137, doi. 10.1093/nar/gki900

By:

Kim, Jeong-Hoon;
Kang, Young-Hoon;
Kang, Hyo-Jin;
Kim, Do-Hyung;
Ryu, Gi-Hyuck;
Kang, Min-Jung;
Seo, Yeon-Soo

Publication type:

Article

Expansion of the BioCyc collection of pathway/genome databases to 160 genomes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 19, p. 6083, doi. 10.1093/nar/gki892

By:

Karp, Peter D.;
Ouzounis, Christos A.;
Moore-Kochlacs, Caroline;
Goldovsky, Leon;
Kaipa, Pallavi;
Ahrén, Dag;
Tsoka, Sophia;
Darzentas, Nikos;
Kunin, Victor;
López-Bigas, Núria

Publication type:

Article