Works matching IS 03051048 AND DT 2005 AND VI 33 AND IP 16

Results: 42

Transformation of isolated mammalian mitochondria by bacterial conjugation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. e139, doi. 10.1093/nar/gni140

By:

Yoon, Young Geol;
Koob, Michael D.

Publication type:

Article

Improved statistical analysis of budding yeast TAG microarrays revealed by defined spike-in pools.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. e140, doi. 10.1093/nar/gni138

By:

Peyser, Brian D.;
Irizarry, Rafael A.;
Tiffany, Carol W.;
Chen, Ou;
Yuan, Daniel S.;
Boeke, Jef D.;
Spencer, Forrest A.

Publication type:

Article

Stringent doxycycline-dependent control of gene activities using an episomal one-vector system.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. e137, doi. 10.1093/nar/gni137

By:

Bornkamm, Georg W.;
Berens, Christian;
Kuklik-Roos, Conny;
Bechet, Jean-Marie;
Laux, Gerhard;
Bachl, Jürgen;
Korndoerfer, Martin;
Schlee, Martin;
Hölzel, Michael;
Malamoussi, Anastassia;
Chapman, Rob D.;
Nimmerjahn, Falk;
Mautner, Josef;
Hillen, Wolfgang;
Bujard, Hermann;
Feuillard, Jean

Publication type:

Article

A novel transcriptome subtraction method for the detection of differentially expressed genes in highly complex eukaryotes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. e136, doi. 10.1093/nar/gni136

By:

Li, L.;
Techel, D.;
Gretz, N.;
Hildebrandt, A.

Publication type:

Article

Thermal difference spectra: a specific signature for nucleic acid structures.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. e138, doi. 10.1093/nar/gni134

By:

Mergny, Jean-Louis;
Li, Jing;
Lacroix, Laurent;
Amrane, Samir;
Chaires, Jonathan B.

Publication type:

Article

Mechanistic studies on DNA damage by minor groove binding copper–phenanthroline conjugates.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5371, doi. 10.1093/nar/gki856

By:

Bales, Brian C.;
Kodama, Tetsuya;
Weledji, Yvonne N.;
Pitié, Marguerite;
Meunier, Bernard;
Greenberg, Marc M.

Publication type:

Article

Modulation of ADAR1 editing activity by Z-RNA in vitro.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5362, doi. 10.1093/nar/gki849

By:

Koeris, Michael;
Funke, Lars;
Shrestha, Jay;
Rich, Alexander;
Maas, Stefan

Publication type:

Article

Phosphorylation of human DNA polymerase λ by the cyclin-dependent kinase Cdk2/cyclin A complex is modulated by its association with proliferating cell nuclear antigen.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5354, doi. 10.1093/nar/gki845

By:

Frouin, Isabelle;
Toueille, Magali;
Ferrari, Elena;
Shevelev, Igor;
Hübscher, Ulrich

Publication type:

Article

Gibbs sampling and helix-cap motifs.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5343, doi. 10.1093/nar/gki842

By:

Kruus, Erik;
Thumfort, Peter;
Tang, Chao;
Wingreen, Ned S.

Publication type:

Article

Common and specific amino acid residues in the prokaryotic polypeptide release factors RF1 and RF2: possible functional implications.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5226, doi. 10.1093/nar/gki841

By:

Oparina, Nina J.;
Kalinina, Olga V.;
Gelfand, Mikhail S.;
Kisselev, Lev L.

Publication type:

Article

High fidelity TNA synthesis by Therminator polymerase.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5219, doi. 10.1093/nar/gki840

By:

Ichida, Justin K.;
Horhota, Allen;
Zou, Keyong;
McLaughlin, Larry W.;
Szostak, Jack W.

Publication type:

Article

Transcriptional repression of human cad gene by hypoxia inducible factor-1α.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5190, doi. 10.1093/nar/gki839

By:

Chen, Ko-Fan;
Lai, Yen-Yu;
Sun, H. Sunny;
Tsai, Shaw-Jenq

Publication type:

Article

GATA-1 mediates auto-regulation of Gfi-1B transcription in K562 cells.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5331, doi. 10.1093/nar/gki838

By:

Huang, Duen-Yi;
Kuo, Yuan-Yeh;
Chang, Zee-Fen

Publication type:

Article

Binding of serum response factor to cystic fibrosis transmembrane conductance regulator CArG-like elements, as a new potential CFTR transcriptional regulation pathway.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5271, doi. 10.1093/nar/gki837

By:

René, Céline;
Taulan, Magali;
Iral, Florence;
Doudement, Julien;
L'Honoré, Aurore;
Gerbon, Catherine;
Demaille, Jacques;
Claustres, Mireille;
Romey, Marie-Catherine

Publication type:

Article

NF-κB controls the global pro-inflammatory response in endothelial cells: evidence for the regulation of a pro-atherogenic program.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5308, doi. 10.1093/nar/gki836

By:

Kempe, Sybille;
Kestler, Hans;
Lasar, Andrea;
Wirth, Thomas

Publication type:

Article

Inverted repeat-stimulated sister-chromatid exchange events are RAD1-independent but reduced in a msh2 mutant.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5243, doi. 10.1093/nar/gki835

By:

Nag, Dilip K.;
Fasullo, Michael;
Dong, Zheng;
Tronnes, Ashlie

Publication type:

Article

Deacylated tRNA is released from the E site upon A site occupation but before GTP is hydrolyzed by EF-Tu.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5291, doi. 10.1093/nar/gki833

By:

Dinos, George;
Kalpaxis, Dimitrios L.;
Wilson, Daniel N.;
Nierhaus, Knud H.

Publication type:

Article

Viral mutations enhance the Max binding properties of the vMyc b-HLH-LZ domain.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5235, doi. 10.1093/nar/gki832

By:

Crouch, D. H.;
Fisher, F.;
La Rocca, S. A.;
Goding, C. R.;
Gillespie, D. A. F.

Publication type:

Article

Expression and regulation of the Msx1 natural antisense transcript during development.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5208, doi. 10.1093/nar/gki831

By:

Coudert, Amélie E.;
Pibouin, Laurence;
Vi-Fane, Brigitte;
Thomas, Bethan L.;
Macdougall, Mary;
Choudhury, Anuradha;
Robert, Benoît;
Sharpe, Paul T.;
Berdal, Ariane;
Lezot, Frédéric

Publication type:

Article

Methylation patterns of histone H3 Lys 4, Lys 9 and Lys 27 in transcriptionally active and inactive Arabidopsis genes and in atx1 mutants.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5199, doi. 10.1093/nar/gki830

By:

Alvarez-Venegas, Raul;
Avramova, Zoya

Publication type:

Article

Human AP endonuclease suppresses DNA mismatch repair activity leading to microsatellite instability.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5073, doi. 10.1093/nar/gki829

By:

Chang, In-Youb;
Kim, Soo-Hyun;
Cho, Hyun-Ju;
Lee, Do Young;
Kim, Mi-Hwa;
Chung, Myung-Hee;
You, Ho Jin

Publication type:

Article

RNase P: role of distinct protein cofactors in tRNA substrate recognition and RNA-based catalysis.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5120, doi. 10.1093/nar/gki828

By:

Sharin, Ela;
Schein, Aleks;
Mann, Hagit;
Ben-Asouli, Yitzhak;
Jarrous, Nayef

Publication type:

Article

An Sp1/KLF binding site is important for the activity of a Polycomb group response element from the Drosophila engrailed gene.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5181, doi. 10.1093/nar/gki827

By:

Brown, J. Lesley;
Grau, Daniel J.;
DeVido, Sarah K.;
Kassis, Judith A.

Publication type:

Article

Characterization of the SECIS binding protein 2 complex required for the co-translational insertion of selenocysteine in mammals.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5172, doi. 10.1093/nar/gki826

By:

Kinzy, Scott A.;
Caban, Kelvin;
Copeland, Paul R.

Publication type:

Article

Evidence that the Tfg1/Tfg2 dimer interface of TFIIF lies near the active center of the RNA polymerase II initiation complex.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5045, doi. 10.1093/nar/gki825

By:

Freire-Picos, M. Angeles;
Krishnamurthy, Shankarling;
Sun, Zu-Wen;
Hampsey, Michael

Publication type:

Article

Extended base pair complementarity between U1 snRNA and the 5′ splice site does not inhibit splicing in higher eukaryotes, but rather increases 5′ splice site recognition.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5112, doi. 10.1093/nar/gki824

By:

Freund, Marcel;
Hicks, Martin J.;
Konermann, Carolin;
Otte, Marianne;
Hertel, Klemens J.;
Schaal, Heiner

Publication type:

Article

Stabilizing contributions of sulfur-modified nucleotides: crystal structure of a DNA duplex with 2′-O-[2-(methoxy)ethyl]-2-thiothymidines.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5297, doi. 10.1093/nar/gki823

By:

Diop-Frimpong, Benjamin;
Prakash, Thazha P.;
Rajeev, Kallanthottathil G.;
Manoharan, Muthiah;
Egli, Martin

Publication type:

Article

RNase III cleavage demonstrates a long range RNA: RNA duplex element flanking the hepatitis C virus internal ribosome entry site.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5250, doi. 10.1093/nar/gki822

By:

Beguiristain, Nerea;
Robertson, Hugh D.;
Gómez, Jordi

Publication type:

Article

Non-homologous end joining, but not homologous recombination, enables survival for cells exposed to a histone deacetylase inhibitor.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5320, doi. 10.1093/nar/gki821

By:

Yaneva, Mariana;
Li, Han;
Marple, Teresa;
Hasty, Paul

Publication type:

Article

Discovery of new genes and deletion editing in Physarum mitochondria enabled by a novel algorithm for finding edited mRNAs.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5063, doi. 10.1093/nar/gki820

By:

Gott, Jonatha M.;
Parimi, Neeta;
Bundschuh, Ralf

Publication type:

Article

Localization, mobility and fidelity of retrotransposed Group II introns in rRNA genes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5262, doi. 10.1093/nar/gki819

By:

Conlan, Lori H.;
Stanger, Matthew J.;
Ichiyanagi, Kenji;
Belfort, Marlene

Publication type:

Article

Comparative genomics analysis of NtcA regulons in cyanobacteria: regulation of nitrogen assimilation and its coupling to photosynthesis.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5156

By:

Su, Zhengchang;
Olman, Victor;
Mao, Fenglou;
Xu, Ying

Publication type:

Article

8-Oxoguanine incorporation into DNA repeats in vitro and mismatch recognition by MutSα.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5094, doi. 10.1093/nar/gki813

By:

Macpherson, Peter;
Barone, Flavia;
Maga, Giovanni;
Mazzei, Filomena;
Karran, Peter;
Bignami, Margherita

Publication type:

Article

Distribution of SR protein exonic splicing enhancer motifs in human protein-coding genes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5053, doi. 10.1093/nar/gki810

By:

Wang, Jinhua;
Smith, Philip J.;
Krainer, Adrian R.;
Zhang, Michael Q.

Publication type:

Article

Trapping DNA–protein binding reactions with neutral osmolytes for the analysis by gel mobility shift and self-cleavage assays.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5145, doi. 10.1093/nar/gki808

By:

Sidorova, Nina Y.;
Muradymov, Shakir;
Rau, Donald C.

Publication type:

Article

Constraining ribosomal RNA conformational space.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5106, doi. 10.1093/nar/gki805

By:

Favaretto, Paola;
Bhutkar, Arjun;
Smith, Temple F.

Publication type:

Article

Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5034, doi. 10.1093/nar/gki804

By:

Steigele, Stephan;
Nieselt, Kay

Publication type:

Article

Transition from initiation to promoter proximal pausing requires the CTD of RNA polymerase II.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5139, doi. 10.1093/nar/gki802

By:

Lux, C.;
Albiez, H.;
Chapman, R. D.;
Heidinger, M.;
Meininghaus, M.;
Brack-Werner, R.;
Lang, A.;
Ziegler, M.;
Cremer, T.;
Eick, D.

Publication type:

Article

The sacrificial role of easily oxidizable sites in the protection of DNA from damage.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5133, doi. 10.1093/nar/gki801

By:

Kanvah, Sriram;
Schuster, Gary B.

Publication type:

Article

Evidence that public database records for many cancer-associated genes reflect a splice form found in tumors and lack normal splice forms.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5026, doi. 10.1093/nar/gki792

By:

Roy, Meenakshi;
Xu, Qiang;
Lee, Christopher

Publication type:

Article

Fluorescent properties of DNA base analogue tC upon incorporation into DNA — negligible influence of neighbouring bases on fluorescence quantum yield.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5019, doi. 10.1093/nar/gki790

By:

Sandin, Peter;
Wilhelmsson, L. Marcus;
Lincoln, Per;
Powers, Vicki E. C.;
Brown, Tom;
Albinsson, Bo

Publication type:

Article

The influence of locked nucleic acid residues on the thermodynamic properties of 2′-O-methyl RNA/RNA heteroduplexes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 16, p. 5082, doi. 10.1093/nar/gki789

By:

Kierzek, Elzbieta;
Ciesielska, Anna;
Pasternak, Karol;
Mathews, David H.;
Turner, Douglas H.;
Kierzek, Ryszard

Publication type:

Article