Works matching IS 03051048 AND DT 2005 AND VI 33 AND IP 14

Results: 34

Methylation-Specific MLPA (MS-MLPA): simultaneous detection of CpG methylation and copy number changes of up to 40 sequences.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. e128, doi. 10.1093/nar/gni127

By:

Nygren, Anders O. H.;
Ameziane, Najim;
Duarte, Helena M. B.;
Vijzelaar, Raymon N. C. P.;
Waisfisz, Quinten;
Hess, Corine J.;
Schouten, Jan P.;
Errami, Abdellatif

Publication type:

Article

Direct detection of methylation in genomic DNA.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. e124, doi. 10.1093/nar/gni121

By:

Bart, A.;
van Passel, M. W. J.;
van Amsterdam, K.;
van der Ende, A.

Publication type:

Article

Headloop suppression PCR and its application to selective amplification of methylated DNA sequences.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. e127, doi. 10.1093/nar/gni120

By:

Rand, Keith N.;
Ho, Thu;
Qu, Wenjia;
Mitchell, Susan M.;
White, Rose;
Clark, Susan J.;
Molloy, Peter L.

Publication type:

Article

Electrochemically directed synthesis of oligonucleotides for DNA microarray fabrication.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. e125, doi. 10.1093/nar/gni117

By:

Egeland, Ryan D.;
Southern, Edwin M.

Publication type:

Article

Multiplex PCR: use of heat-stable Thermus thermophilus RecA protein to minimize non-specific PCR products.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. e126, doi. 10.1093/nar/gni111

By:

Shigemori, Yasushi;
Mikawa, Tsutomu;
Shibata, Takehiko;
Oishi, Michio

Publication type:

Article

Not so crystal clear: the structure of the human telomere G-quadruplex in solution differs from that present in a crystal.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4649

By:

Li, Jing;
Correia, John J.;
Wang, Lei;
Trent, John O.;
Chaires, Jonathan B.

Publication type:

Article

Potentiation of gene targeting in human cells by expression of Saccharomyces cerevisiae Rad52.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4639, doi. 10.1093/nar/gki778

By:

Di Primio, Cristina;
Galli, Alvaro;
Cervelli, Tiziana;
Zoppè, Monica;
Rainaldi, Giuseppe

Publication type:

Article

Ancestral paralogs and pseudoparalogs and their role in the emergence of the eukaryotic cell.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4626, doi. 10.1093/nar/gki775

By:

Makarova, Kira S.;
Wolf, Yuri I.;
Mekhedov, Sergey L.;
Mirkin, Boris G.;
Koonin, Eugene V.

Publication type:

Article

Synergistic defect in 60S ribosomal subunit assembly caused by a mutation of Rrs1p, a ribosomal protein L11-binding protein, and 3′-extension of 5S rRNA in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4553, doi. 10.1093/nar/gki772

By:

Nariai, Masanobu;
Tanaka, Tomohisa;
Okada, Takafumi;
Shirai, Chiharu;
Horigome, Chihiro;
Mizuta, Keiko

Publication type:

Article

Identification of RNA editing sites in the SNP database.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4612, doi. 10.1093/nar/gki771

By:

Eisenberg, Eli;
Adamsky, Konstantin;
Cohen, Lital;
Amariglio, Ninette;
Hirshberg, Abraham;
Rechavi, Gideon;
Levanon, Erez Y.

Publication type:

Article

A peripheral element assembles the compact core structure essential for group I intron self-splicing.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4602, doi. 10.1093/nar/gki770

By:

Xiao, Mu;
Li, Tingting;
Yuan, Xiaoyan;
Shang, Yuan;
Wang, Fu;
Chen, Shoudeng;
Zhang, Yi

Publication type:

Article

Telomere structure and shortening in telomerase-deficient Trypanosoma brucei.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4536, doi. 10.1093/nar/gki769

By:

Dreesen, Oliver;
Li, Bibo;
Cross, George A. M.

Publication type:

Article

GANA—a genetic algorithm for NMR backbone resonance assignment.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4593, doi. 10.1093/nar/gki768

By:

Lin, Hsin-Nan;
Wu, Kun-Pin;
Chang, Jia-Ming;
Sung, Ting-Yi;
Hsu, Wen-Lian

Publication type:

Article

Using multiple alignments to improve seeded local alignment algorithms.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4563, doi. 10.1093/nar/gki767

By:

Flannick, Jason;
Batzoglou, Serafim

Publication type:

Article

Differential and collaborative actions of Rad51 paralog proteins in cellular response to DNA damage.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4544, doi. 10.1093/nar/gki766

By:

Yonetani, Yasukazu;
Hochegger, Helfrid;
Sonoda, Eiichiro;
Shinya, Sayoko;
Yoshikawa, Hideki;
Takeda, Shunichi;
Yamazoe, Mistuyoshi

Publication type:

Article

Interplay between GCN2 and GCN4 expression, translation elongation factor 1 mutations and translational fidelity in yeast.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4584, doi. 10.1093/nar/gki765

By:

Magazinnik, Tanya;
Anand, Monika;
Sattlegger, Evelyn;
Hinnebusch, Alan G.;
Kinzy, Terri Goss

Publication type:

Article

Evidence for rolling circle replication of tandem genes in Drosophila.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4519, doi. 10.1093/nar/gki764

By:

Cohen, Sarit;
Agmon, Neta;
Yacobi, Keren;
Mislovati, Margarita;
Segal, Daniel

Publication type:

Article

Novel DNA-binding properties of the RNA-binding protein TIAR.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4507, doi. 10.1093/nar/gki763

By:

Suswam, Esther A.;
Li, Yan Yan;
Mahtani, Harry;
King, Peter H.

Publication type:

Article

siRNA-mediated off-target gene silencing triggered by a 7 nt complementation.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4527, doi. 10.1093/nar/gki762

By:

Lin, Xiaoyu;
Ruan, Xiaoan;
Anderson, Mark G.;
McDowell, Jeffrey A.;
Kroeger, Paul E.;
Fesik, Stephen W.;
Shen, Yu

Publication type:

Article

Group 13 HOX proteins interact with the MH2 domain of R-Smads and modulate Smad transcriptional activation functions independent of HOX DNA-binding capability.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4475, doi. 10.1093/nar/gki761

By:

Williams, Thomas M.;
Williams, Melissa E.;
Heaton, Joanne H.;
Gelehrter, Thomas D.;
Innis, Jeffrey W.

Publication type:

Article

Oxidative stress-induced apoptosis in neurons correlates with mitochondrial DNA base excision repair pathway imbalance.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4660, doi. 10.1093/nar/gki759

By:

Harrison, Jason F.;
Hollensworth, Scott B.;
Spitz, Douglas R.;
Copeland, William C.;
Wilson, Glenn L.;
LeDoux, Susan P.

Publication type:

Article

Identification and characterization of endogenous small interfering RNAs from rice.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4443, doi. 10.1093/nar/gki758

By:

Sunkar, Ramanjulu;
Girke, Thomas;
Zhu, Jian-Kang

Publication type:

Article

The Rhodomonas salina mitochondrial genome: bacteria-like operons, compact gene arrangement and complex repeat region.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4433, doi. 10.1093/nar/gki757

By:

Hauth, Amy M.;
Maier, Uwe G.;
Lang, B. Franz;
Burger, Gertraud

Publication type:

Article

Identification and analysis of ribonuclease P and MRP RNA in a broad range of eukaryotes.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4485, doi. 10.1093/nar/gki756

By:

Piccinelli, Paul;
Rosenblad, Magnus Alm;
Samuelsson, Tore

Publication type:

Article

Predicting specificity-determining residues in two large eukaryotic transcription factor families.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4455, doi. 10.1093/nar/gki755

By:

Donald, Jason E.;
Shakhnovich, Eugene I.

Publication type:

Article

Computer identification of snoRNA genes using a Mammalian Orthologous Intron Database.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4578, doi. 10.1093/nar/gki754

By:

Fedorov, Alexei;
Stombaugh, Jesse;
Harr, Michael W.;
Yu, Saihua;
Nasalean, Lorena;
Shepelev, Valery

Publication type:

Article

Activation of APE1/Ref-1 is dependent on reactive oxygen species generated after purinergic receptor stimulation by ATP.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4379, doi. 10.1093/nar/gki751

By:

Pines, Alex;
Perrone, Lorena;
Bivi, Nicoletta;
Romanello, Milena;
Damante, Giuseppe;
Gulisano, Massimo;
Kelley, Mark R.;
Quadrifoglio, Franco;
Tell, Gianluca

Publication type:

Article

Kinetic resolution of bimolecular hybridization versus intramolecular folding in nucleic acids by surface plasmon resonance: application to G-quadruplex/duplex competition in human c-myc promoter.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4466, doi. 10.1093/nar/gki750

By:

Halder, Kangkan;
Chowdhury, Shantanu

Publication type:

Article

Base excision repair intermediates are mutagenic in mammalian cells.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4404, doi. 10.1093/nar/gki749

By:

Simonelli, Valeria;
Narciso, Laura;
Dogliotti, Eugenia;
Fortini, Paola

Publication type:

Article

Curved DNA molecules migrate anomalously slowly in free solution.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4425, doi. 10.1093/nar/gki748

By:

Stellwagen, Earle;
Lu, Yongjun;
Stellwagen, Nancy C.

Publication type:

Article

Initiation of DNA replication at the human β-globin 3′ enhancer.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4412, doi. 10.1093/nar/gki747

By:

Buzina, Alla;
Aladjem, Mirit I.;
Kolman, John L.;
Wahl, Geoffrey M.;
Ellis, James

Publication type:

Article

DNA-dependent conversion of Oct-1 and Oct-2 into transcriptional repressors by Groucho/TLE.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4618, doi. 10.1093/nar/gki744

By:

Malin, Stephen;
Linderson, Ylva;
Almqvist, Jenny;
Ernberg, Ingemar;
Tallone, Tiziano;
Pettersson, Sven

Publication type:

Article

Unfolding of DNA quadruplexes induced by HIV-1 nucleocapsid protein.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4395, doi. 10.1093/nar/gki741

By:

Kankia, Besik I.;
Barany, George;
Musier-Forsyth, Karin

Publication type:

Article

Refinement of docked protein–ligand and protein–DNA structures using low frequency normal mode amplitude optimization.

Published in:

Nucleic Acids Research, 2005, v. 33, n. 14, p. 4496, doi. 10.1093/nar/gki730

By:

Lindahl, Erik;
Delarue, Marc

Publication type:

Article