Works matching IS 03051048 AND DT 2001 AND VI 29 AND IP 3

Results: 40

A new method for generating point mutations in bacterial artificial chromosomes by homologous recombination in Escherichia coli.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e14, doi. 10.1093/nar/29.3.e14

By:

Lalioti, Maria D.;
Heath, John K.

Publication type:

Article

Simultaneous A8344G heteroplasmy and mitochondrial DNA copy number quantification in Myoclonus Epilepsy and Ragged-Red Fibers (MERRF) syndrome by a multiplex Molecular Beacon based real-time fluorescence PCR.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e13, doi. 10.1093/nar/29.3.e13

By:

Szuhai, Károly;
Ouweland, Jody M. van den;
Dirks, Roeland W.;
Lemaître, Marc;
Truffert, Jean-Christophe;
Janssen, George M.;
Tanke, Hans J.;
Holme, Elisabeth;
Maassen, J. Antonie;
Raap, Anton K.

Publication type:

Article

Measurement of 8-hydroxy-2′-deoxyguanosine in DNA by high-performance liquid chromatography-mass spectrometry: comparison with measurement by gas chromatography-mass spectrometry.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e12, doi. 10.1093/nar/29.3.e12

By:

Dizdaroglu, Miral;
Jaruga, Pawel;
Rodriguez, Henry

Publication type:

Article

DNA sequencing and genotyping by transcriptional synthesis of chain-terminated RNA ladders and MALDI-TOF mass spectrometry.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e11, doi. 10.1093/nar/29.3.e11

By:

Kwon, Young-Soo;
Tang, Kai;
Cantor, Charles R.;
Köster, Hubert;
Kang, Changwon

Publication type:

Article

A method for the generation of conditional gene repair mutations in mice.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e10, doi. 10.1093/nar/29.3.e10

By:

Dragatsis, Ioannis;
Zeitlin, Scott

Publication type:

Article

Orthogonal combinatorial mutagenesis: a codon-level combinatorial mutagenesis method useful for low multiplicity and amino acid-scanning protocols.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. e9, doi. 10.1093/nar/29.3.e9

By:

Gaytán, Paul;
Yáñez, Jorge;
Sánchez, Filiberto;
Soberón, Xavier

Publication type:

Article

Stable expression in yeast of the mature form of human telomerase RNA depends on its association with the box H/ACA small nucleolar RNP proteins Cbf5p, Nhp2p and Nop10p.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 598, doi. 10.1093/nar/29.3.598

By:

Dez, Christophe;
Henras, Anthony;
Faucon, Bruno;
Lafontaine, Denis L. J.;
Caizergues-Ferrer, Michèle;
Henry, Yves

Publication type:

Article

Smad proteins function as co-modulators for MEF2 transcriptional regulatory proteins.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 732, doi. 10.1093/nar/29.3.732

By:

Quinn, Zoë A.;
Yang, Chih-Chin;
Wrana, Jeffrey L.;
McDermott, John C.

Publication type:

Article

Leucine zipper motif of chicken histone acetyltransferase-1 is essential for in vivo and in vitro interactions with the p48 subunit of chicken chromatin assembly factor-1.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 629, doi. 10.1093/nar/29.3.629

By:

Ahmad, Ahyar;
Nagamatsu, Nahoko;
Kouriki, Haruna;
Takami, Yasunari;
Nakayama, Tatsuo

Publication type:

Article

RNA editing in Trypanosoma brucei: characterization of gRNA U-tail interactions with partially edited mRNA substrates.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 703, doi. 10.1093/nar/29.3.703

By:

Leung, Sheldon S.;
Koslowsky, Donna J.

Publication type:

Article

Analysis of six prophages in Lactococcus lactis IL1403: different genetic structure of temperate and virulent phage populations.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 644, doi. 10.1093/nar/29.3.644

By:

Chopin, Alain;
Bolotin, Alexander;
Sorokin, Alexei;
Ehrlich, S. Dusko;
Chopin, Marie-Christine

Publication type:

Article

Triplex forming oligonucleotide targeted to 3′UTR downregulates the expression of the bcl-2 proto-oncogene in HeLa cells.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 622, doi. 10.1093/nar/29.3.622

By:

Shen, Changxian;
Buck, Andreas;
Mehrke, Gerhard;
Polat, Bülent;
Gross, Hans-Jügen;
Bachem, Max;
Reske, Sven

Publication type:

Article

Ribosomal protein S7 from Escherichia coli uses the same determinants to bind 16S ribosomal RNA and its messenger RNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 677, doi. 10.1093/nar/29.3.677

By:

Robert, Francis;
Brakier-Gingras, Léa

Publication type:

Article

RAD51 supports spontaneous non-homologous recombination in mammalian cells, but not the corresponding process induced by topoisomerase inhibitors.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 662, doi. 10.1093/nar/29.3.662

By:

Arnaudeau, Catherine;
Rozier, Lorène;
Cazaux, Christophe;
Defais, Martine;
Jenssen, Dag;
Helleday, Thomas

Publication type:

Article

An alteration in concatameric structure is associated with efficient segregation of plasmids in transfected Plasmodium falciparum parasites.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 716, doi. 10.1093/nar/29.3.716

By:

O’Donnell, Rebecca A.;
Preiser, Peter R.;
Williamson, Donald H.;
Moore, Peter W.;
Cowman, Alan F.;
Crabb, Brendan S.

Publication type:

Article

Multiple four-stranded conformations of human telomere sequence d(CCCTAA) in solution.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 831, doi. 10.1093/nar/29.3.831

By:

Kanaori, Kenji;
Shibayama, Naoko;
Gohda, Keigo;
Tajima, Kunihiko;
Makino, Keisuke

Publication type:

Article

Juglone, an inhibitor of the peptidyl-prolyl isomerase Pin1, also directly blocks transcription.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 767, doi. 10.1093/nar/29.3.767

By:

Chao, Sheng-Hao;
Greenleaf, Arno L.;
Price, David H.

Publication type:

Article

A thermostable endonuclease III homolog from the archaeon Pyrobaculum aerophilum.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 604, doi. 10.1093/nar/29.3.604

By:

Yang, Hanjing;
Phan, Isabella T.;
Fitz-Gibbon, Sorel;
Shivji, Mahmud K. K.;
Wood, Richard D.;
Clendenin, Wendy M.;
Hyman, Elizabeth C.;
Miller, Jeffrey H.

Publication type:

Article

Combined transcriptome and proteome analysis as a powerful approach to study genes under glucose repression in Bacillus subtilis.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 683, doi. 10.1093/nar/29.3.683

By:

Yoshida, Ken-ichi;
Kobayashi, Kazuo;
Miwa, Yasuhiko;
Kang, Choong-Min;
Matsunaga, Masayuki;
Yamaguchi, Hirotake;
Tojo, Shigeo;
Yamamoto, Mami;
Nishi, Ryoko;
Ogasawara, Naotake;
Nakayama, Tatsuo;
Fujita, Yasutaro

Publication type:

Article

Plant orthologs of p300/CBP: conservation of a core domain in metazoan p300/CBP acetyltransferase-related proteins.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 589, doi. 10.1093/nar/29.3.589

By:

Bordoli, Lorenza;
Netsch, Marco;
Lüthi, Urs;
Lutz, Werner;
Eckner, Richard

Publication type:

Article

Triplex targeting of human PDGF-B (c-sis, proto-oncogene) promoter specifically inhibits factors binding and PDGF-B transcription.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 783, doi. 10.1093/nar/29.3.783

By:

Liu, Jing;
Xu, Ren-Huan;
Jin, You-Xin;
Wang, De-Bao

Publication type:

Article

Multiple sites of replication initiation in the human β-globin gene locus.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 809, doi. 10.1093/nar/29.3.809

By:

Kamath, Sobha;
Leffak, Michael

Publication type:

Article

Replicative helicases can translocate through abasic site-induced covalent topoisomerase IV–DNA complexes.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 614, doi. 10.1093/nar/29.3.614

By:

Shea, Molly E.;
Hiasa, Hiroshi

Publication type:

Article

Specific down-regulation of an engineered human cyclin D1 promoter by a novel DNA-binding ligand in intact cells.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 652, doi. 10.1093/nar/29.3.652

By:

Laurance, Megan E.;
Starr, D. Barry;
Michelotti, Emil F.;
Cheung, Elaine;
Gonzalez, Carolyn;
Tam, Albert W.;
Deikman, Jon;
Edwards, Cynthia A.;
Bardwell, A. Jane

Publication type:

Article

Enhanced activity of adenine-DNA glycosylase (Myh) by apurinic/apyrimidinic endonuclease (Ape1) in mammalian base excision repair of an A/GO mismatch.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 743, doi. 10.1093/nar/29.3.743

By:

Yang, Hanjing;
Clendenin, Wendy M.;
Wong, Donny;
Demple, Bruce;
Slupska, Malgorzata M.;
Chiang, Ju-Huei;
Miller, Jeffrey H.

Publication type:

Article

Antisense-mediated decrease in DNA ligase III expression results in reduced mitochondrial DNA integrity.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 668, doi. 10.1093/nar/29.3.668

By:

Lakshmipathy, Uma;
Campbell, Colin

Publication type:

Article

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 774, doi. 10.1093/nar/29.3.774

By:

McCue, Lee Ann;
Thompson, William;
Carmack, C. Steven;
Ryan, Michael P.;
Liu, Jun S.;
Derbyshire, Victoria;
Lawrence, Charles E.

Publication type:

Article

Pseudoknots in prion protein mRNAs confirmed by comparative sequence analysis and pattern searching.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 753, doi. 10.1093/nar/29.3.753

By:

Barrette, Isabelle;
Poisson, Guylaine;
Gendron, Patrick;
Major, François

Publication type:

Article

KH domain: one motif, two folds.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 638, doi. 10.1093/nar/29.3.638

By:

Grishin, Nick V.

Publication type:

Article

Mutagenesis of the peptidyltransferase center of 23S rRNA: the invariant U2449 is dispensable.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 710, doi. 10.1093/nar/29.3.710

By:

O’Connor, Michael;
Lee, Wyan-Ching Mimi;
Mankad, Anuj;
Squires, Catherine L.;
Dahlberg, Albert E.

Publication type:

Article

The Crithidia fasciculata RNH1 gene encodes both nuclear and mitochondrial isoforms of RNase H.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 725, doi. 10.1093/nar/29.3.725

By:

Engel, Michele L.;
Hines, Jane C.;
Ray, Dan S.

Publication type:

Article

Transformation of malaria parasites by the spontaneous uptake and expression of DNA from human erythrocytes.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 850, doi. 10.1093/nar/29.3.850

By:

Deitsch, Kirk W.;
Driskill, Casey L.;
Wellems, Thomas E.

Publication type:

Article

Transcriptional activation of the small GTPase gene rhoB by genotoxic stress is regulated via a CCAAT element.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 792, doi. 10.1093/nar/29.3.792

By:

Fritz, Gerhard;
Kaina, Bernd

Publication type:

Article

Induction and repression of DAN1 and the family of anaerobic mannoprotein genes in Saccharomyces cerevisiae occurs through a complex array of regulatory sites.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 799, doi. 10.1093/nar/29.3.799

By:

Cohen, Brian D.;
Sertil, Odeniel;
Abramova, Natalia E.;
Davies, Kelvin J. A.;
Lowry, Charles V.

Publication type:

Article

Topography of lacUV5 initiation complexes.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 854, doi. 10.1093/nar/29.3.854

By:

Studitsky, Vasily M.;
Brodolin, Konstantin L.;
Liu, Ye;
Mirzabekov, Andrei D.

Publication type:

Article

Inhibition of poly(ADP-ribose) polymerase activity is insufficient to induce tetraploidy.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 841, doi. 10.1093/nar/29.3.841

By:

Simbulan-Rosenthal, Cynthia M.;
Rosenthal, Dean S.;
Luo, RuiBai;
Li, Jia-He;
Zhang, Jie;
Smulson, Mark E.

Publication type:

Article

Induced fit DNA recognition by a minor groove binding analogue of Hoechst 33258: fluctuations in DNA A tract structure investigated by NMR and molecular dynamics simulations.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 693, doi. 10.1093/nar/29.3.693

By:

Bostock-Smith, Clare E.;
Harris, Sarah A.;
Laughton, Charles A.;
Searle, Mark S.

Publication type:

Article

Rational design of a bacterial transcriptional cascade for amplifying gene expression capacity.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 759, doi. 10.1093/nar/29.3.759

By:

Cebolla, Angel;
Sousa, Carolina;
Lorenzo, Víctor de

Publication type:

Article

Digging for dead genes: an analysis of the characteristics of the pseudogene population in the Caenorhabditis elegans genome.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 818, doi. 10.1093/nar/29.3.818

By:

Harrison, Paul M.;
Echols, Nathaniel;
Gerstein, Mark B.

Publication type:

Article

Protein-free parallel triple-stranded DNA complex formation.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 3, p. 986, doi. 10.1093/nar/29.4.986

By:

Shchyolkina, A. K.;
Timofeev, E. N.;
Lysov, Yu. P.;
Florentiev, V. L.;
Jovin, T. M.;
Arndt-Jovin, D. J.

Publication type:

Article