Works matching IS 03051048 AND DT 2001 AND VI 29 AND IP 24

Results: 43

A novel technique for the identification of CpG islands exhibiting altered methylation patterns (ICEAMP).

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. e123, doi. 10.1093/nar/29.24.e123

By:

Brock, Graham J. R.;
Huang, Tim Hui-Ming;
Chen, Chuan-Mu;
Johnson, Keith J.

Publication type:

Article

Nucleic acid fragmentation on the millisecond timescale using a conventional X-ray rotating anode source: application to protein–DNA footprinting.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. e122, doi. 10.1093/nar/29.24.e122

By:

Henn, Arnon;
Halfon, Jacob;
Kela, Itai;
Orion, Itzhak;
Sagi, Irit

Publication type:

Article

Genotyping by apyrase-mediated allele-specific extension.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. e121, doi. 10.1093/nar/29.24.e121

By:

Ahmadian, Afshin;
Gharizadeh, Baback;
O’Meara, Deirdre;
Odeberg, Jacob;
Lundeberg, Joakim

Publication type:

Article

FspAI, a unique type II restriction endonuclease that recognizes the octanucleotide sequence 5′-RTGC↓GCAY-3′.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. e120, doi. 10.1093/nar/29.24.e120

By:

Kesminiene, A.;
Maneliene, Z.;
Vitkute, J.;
Petruyte, M.;
Janulaitis, A.

Publication type:

Article

Distribution of substitution rates and location of insertion sites in the tertiary structure of ribosomal RNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5017, doi. 10.1093/nar/29.24.5017

By:

Wuyts, Jan;
Peer, Yves Van de;
Wachter, Rupert De

Publication type:

Article

Structure-dependent reactivity of oxyfunctionalized acetophenones in the photooxidation of DNA: base oxidation and strand breaks through photolytic radical formation (spin trapping, EPR spectroscopy, transient kinetics) versus photosensitization ...

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4955, doi. 10.1093/nar/29.24.4955

By:

Adam, Waldemar;
Arnold, Markus A.;
Nau, Werner M.;
Pischel, Uwe;
Saha-Möller, Chantu R.

Publication type:

Article

Mode of DNA–protein interaction between the C-terminal domain of Escherichia coli RNA polymerase α subunit and T7D promoter UP element.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4909, doi. 10.1093/nar/29.24.4909

By:

Ozoline, Olga N.;
Fujita, Nobuyuki;
Ishihama, Akira

Publication type:

Article

Sequence organization of barley centromeres.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5029, doi. 10.1093/nar/29.24.5029

By:

Hudakova, Sabina;
Michalek, Wolfgang;
Presting, Gernot G.;
Hoopen, Rogier ten;
Santos, Karla dos;
Jasencakova, Zuzana;
Schubert, Ingo

Publication type:

Article

Directed evolution of a recombinase for improved genomic integration at a native human sequence.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5044, doi. 10.1093/nar/29.24.5044

By:

Sclimenti, Christopher R.;
Thyagarajan, Bhaskar;
Calos, Michele P.

Publication type:

Article

Effect of chromosomal locus, GC content and length of homology on PCR-mediated targeted gene replacement in Saccharomyces.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5156, doi. 10.1093/nar/29.24.5156

By:

Gray, Misa;
Honigberg, Saul M.

Publication type:

Article

An efficient ligation reaction promoted by a Varkud Satellite ribozyme with extended 5′- and 3′-termini.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5115, doi. 10.1093/nar/29.24.5115

By:

Jones, Fatima D.;
Ryder, Sean P.;
Strobel, Scott A.

Publication type:

Article

Intracellular generation of single-stranded DNA for chromosomal triplex formation and induced recombination.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5140, doi. 10.1093/nar/29.24.5140

By:

Datta, Hirock J.;
Glazer, Peter M.

Publication type:

Article

A second NAD+-dependent DNA ligase (LigB) in Escherichia coli.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4930, doi. 10.1093/nar/29.24.4930

By:

Sriskanda, Verl;
Shuman, Stewart

Publication type:

Article

Uracil-DNA glycosylase-deficient yeast exhibit a mitochondrial mutator phenotype.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4935, doi. 10.1093/nar/29.24.4935

By:

Chatterjee, Aditi;
Singh, Keshav K.

Publication type:

Article

All three functional domains of the large ribosomal subunitprotein L25 are required for both early and late pre-rRNA processing steps in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5001, doi. 10.1093/nar/29.24.5001

By:

van Beekvelt, Catelijne A.;
de Graaff-Vincent, Muriel;
Faber, Alex W.;
van ’t Riet, Jan;
Venema, Jaap;
Raué, Hendrik A.

Publication type:

Article

La autoantigen enhances translation of BiP mRNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5009, doi. 10.1093/nar/29.24.5009

By:

Kim, Yoon Ki;
Back, Sung Hoon;
Rho, Jungmin;
Lee, Song Hee;
Jang, Sung Key

Publication type:

Article

RNase H mediated cleavage of RNA by cyclohexene nucleic acid (CeNA).

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4941, doi. 10.1093/nar/29.24.4941

By:

Verbeure, Birgit;
Lescrinier, Eveline;
Wang, Jing;
Herdewijn, Piet

Publication type:

Article

A protonated base pair participating in rRNA tertiary structural interactions.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5067, doi. 10.1093/nar/29.24.5067

By:

Kubarenko, Andriy V.;
Sergiev, Petr V.;
Bogdanov, Alexey A.;
Brimacombe, Richard;
Dontsova, Olga A.

Publication type:

Article

The trypanosome homolog of human p32 interacts with RBP16 and stimulates its gRNA binding activity.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5216, doi. 10.1093/nar/29.24.5216

By:

Hayman, Mark L.;
Miller, Melissa M.;
Chandler, Devin M.;
Goulah, Christopher C.;
Read, Laurie K.

Publication type:

Article

The genetic organization and evolution of the broad host range mercury resistance plasmid pSB102 isolated from a microbial population residing in the rhizosphere of alfalfa.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5169, doi. 10.1093/nar/29.24.5169

By:

Schneiker, Susanne;
Keller, Mathias;
Dröge, Marcus;
Lanka, Erich;
Pühler, Alfred;
Selbitschka, Werner

Publication type:

Article

Activation of p53 protein by telomeric (TTAGGG)n repeats.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5207, doi. 10.1093/nar/29.24.5207

By:

Milyavsky, Michael;
Mimran, Avishai;
Senderovich, Shai;
Zurer, Irit;
Erez, Neta;
Shats, Igor;
Goldfinger, Naomi;
Irun CohenIrun Cohen;
Rotter, Varda

Publication type:

Article

Retinoic acid receptor α1 variants, RARα1ΔB and RARα1ΔBC, define a new class of nuclear receptor isoforms.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4901, doi. 10.1093/nar/29.24.4901

By:

Parrado, Antonio;
Despouy, Gilles;
Kraïba, Radhia;
Pogam, Carole Le;
Dupas, Stéphane;
Choquette, Maryline;
Robledo, Macarena;
Larghero, Jérôme;
Bui, Hung;
Gall, Isabelle Le;
Rochette-Egly, Cécile;
Chomienne, Christine;
Padua, Rose Ann

Publication type:

Article

Structural study of DNA duplexes containing the (6–4) photoproduct by fluorescence resonance energy transfer.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4948, doi. 10.1093/nar/29.24.4948

By:

Mizukoshi, Toshimi;
Kodama, Takashi S.;
Fujiwara, Yoshie;
Furuno, Tadahide;
Nakanishi, Mamoru;
Iwai, Shigenori

Publication type:

Article

The protein ORF80 from the acidophilic and thermophilic archaeon Sulfolobus islandicus binds highly site-specifically to double-stranded DNA and represents a novel type of basic leucine zipper protein.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4973, doi. 10.1093/nar/29.24.4973

By:

Lipps, Georg;
Ibanez, Pablo;
Stroessenreuther, Thomas;
Hekimian, Katya;
Krauss, Gerhard

Publication type:

Article

Selected base sequence outside the target binding site of zinc finger protein Sp1.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4920, doi. 10.1093/nar/29.24.4920

By:

Nagaoka, Makoto;
Shiraishi, Yasuhisa;
Sugiura, Yukio

Publication type:

Article

Exocyclic groups in the minor groove influence the backbone conformation of DNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5036, doi. 10.1093/nar/29.24.5036

By:

Wellenzohn, Bernd;
Flader, Wolfgang;
Winger, Rudolf H.;
Hallbrucker, Andreas;
Mayer, Erwin;
Liedl, Klaus R.

Publication type:

Article

-CH2- lengthening of the internucleotide linkage in the ApA dimer can improve its conformational compatibility with its natural polynucleotide counterpart.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5182, doi. 10.1093/nar/29.24.5182

By:

Hanu, J.;
Barvík, I.;
Ruszová-Chmelová, K.;
tÆpánek, J.;
Turpin, P.-Y.;
Bok, J.;
Rosenberg, I.;
Petrová-Endová, M.

Publication type:

Article

A mutation in the primer grip region of HIV-1 reverse transcriptase that confers reduced fidelity of DNA synthesis.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4963, doi. 10.1093/nar/29.24.4963

By:

Gutiérrez-Rivas, Mónica;
Menéndez-Arias, Luis

Publication type:

Article

An architectural role of the Escherichia coli chromatin protein FIS in organising DNA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5107, doi. 10.1093/nar/29.24.5107

By:

Schneider, Robert;
Lurz, Rudolf;
Lüder, Gerhild;
Tolksdorf, Carolin;
Travers, Andrew;
Muskhelishvili, Georgi

Publication type:

Article

Destabilization of tRNA3Lys from the primer-binding site of HIV-1 genome by anti-A loop polyamide nucleotide analog.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5099, doi. 10.1093/nar/29.24.5099

By:

Kaushik, Neerja;
Talele, Tanaji T.;
Monel, Raymond;
Palumbo, Paul;
Pandey, Virendra N.

Publication type:

Article

Gene expression in the developing mouse retina by EST sequencing and microarray analysis.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4983

By:

Mu, Xiuqian;
Zhao, Sheng;
Pershad, Rashmi;
Hsieh, Tzung-Fu;
Scarpa, Ann;
Wang, Steven W.;
White, R. Allen;
Beremand, Phillip D.;
Thomas, Terry L.;
Gan, Lin;
Klein, William H.

Publication type:

Article

Comparative analysis of FUR regulons in gamma-proteobacteria.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5195, doi. 10.1093/nar/29.24.5195

By:

Panina, E. M.;
Mironov, A. A.;
Gelfand, M. S.

Publication type:

Article

Effective inhibition of herpes simplex virus 1 gene expression and growth by engineered RNase P ribozyme.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5071, doi. 10.1093/nar/29.24.5071

By:

Trang, Phong;
Lee, Jarone;
Kilani, Ahmed F.;
Kim, Joe;
Liu, Fenyong

Publication type:

Article

The effect of surface probe density on DNA hybridization.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5163, doi. 10.1093/nar/29.24.5163

By:

Peterson, Alexander W.;
Heaton, Richard J.;
Georgiadis, Rosina M.

Publication type:

Article

Two thyroid hormone-mediated gene expression patterns in vivo identified by cDNA expression arrays in rat.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5148, doi. 10.1093/nar/29.24.5148

By:

Weitzel, Joachim M.;
Radtke, Christiane;
Seitz, Hans J.

Publication type:

Article

Flavones inhibit the hexameric replicative helicase RepA.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5058

By:

Xu, Hai;
Ziegelin, Günter;
Schröder, Werner;
Frank, Joachim;
Ayora, Sylvia;
Alonso, Juan Carlos;
Lanka, Erich;
Saenger, Wolfram

Publication type:

Article

Constraints on reinitiation of translation in mammals.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5226, doi. 10.1093/nar/29.24.5226

By:

Kozak, Marilyn

Publication type:

Article

NMR structure of a ribosomal RNA hairpin containing a conserved CUCAA pentaloop.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5129, doi. 10.1093/nar/29.24.5129

By:

Nagaswamy, Uma;
Gao, Xiaolian;
Martinis, Susan A.;
Fox, George E.

Publication type:

Article

Transcription factor Sp3 is regulated by acetylation.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 4994, doi. 10.1093/nar/29.24.4994

By:

Braun, Harald;
Koop, Ronald;
Ertmer, Alexa;
Nacht, Silvina;
Suske, Guntram

Publication type:

Article

Conserved RNA secondary structures in Picornaviridae genomes.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5079, doi. 10.1093/nar/29.24.5079

By:

Witwer, Christina;
Rauscher, Susanne;
Hofacker, Ivo L.;
Stadler, Peter F.

Publication type:

Article

Bypass of heterology during strand transfer by Saccharomyces cerevisiae Rad51 protein.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5052, doi. 10.1093/nar/29.24.5052

By:

Holmes, Victor F.;
Benjamin, Kirsten R.;
Crisona, Nancy J.;
Cozzarelli, Nicholas R.

Publication type:

Article

Attachment of benzaldehyde-modified oligodeoxynucleotide probes to semicarbazide-coated glass.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5090, doi. 10.1093/nar/29.24.5090

By:

Podyminogin, Mikhail A.;
Lukhtanov, Eugeny A.;
Reed, Michael W.

Publication type:

Article

Effects of polyamines on the thermal stability and formation kinetics of DNA duplexes with abnormal structure.

Published in:

Nucleic Acids Research, 2001, v. 29, n. 24, p. 5121, doi. 10.1093/nar/29.24.5121

By:

Hou, Ming-Hon;
Lin, Shwu-Bin;
Yuann, Jeu-Ming P.;
Lin, Wei-Chen;
Wang, Andrew H.-J.;
Kan, Lou-sing

Publication type:

Article