Works matching IS 0305-1048 AND VI 48 AND IP 8 AND DT 2020

Results: 24

A transient α-helix in the N-terminal RNA recognition motif of polypyrimidine tract binding protein senses RNA secondary structure.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4521, doi. 10.1093/nar/gkaa155

By:

Maris, Christophe;
Jayne, Sandrine;
Damberger, Fred F.;
Beusch, Irene;
Dorn, Georg;
Ravindranathan, Sapna;
Allain, Frédéric H-T

Publication type:

Article

Mechanistic insights from structure of Mycobacterium smegmatis topoisomerase I with ssDNA bound to both N- and C-terminal domains.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4448, doi. 10.1093/nar/gkaa201

By:

Cao, Nan;
Tan, Kemin;
Zuo, Xiaobing;
Annamalai, Thirunavukkarasu;
Tse-Dinh, Yuk-Ching

Publication type:

Article

Regulation of the RNA and DNA nuclease activities required for Pyrococcus furiosus Type III-B CRISPR–Cas immunity.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4418, doi. 10.1093/nar/gkaa176

By:

Foster, Kawanda;
Grüschow, Sabine;
Bailey, Scott;
White, Malcolm F;
Terns, Michael P

Publication type:

Article

A newly identified Leishmania IF4E-interacting protein, Leish4E-IP2, modulates the activity of cap-binding protein paralogs.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4405, doi. 10.1093/nar/gkaa173

By:

Tupperwar, Nitin;
Meleppattu, Shimi;
Shrivastava, Rohit;
Baron, Nofar;
Gilad, Ayelet;
Wagner, Gerhard;
Léger-Abraham, Mélissa;
Shapira, Michal

Publication type:

Article

Spatially regulated editing of genetic information within a neuron.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 3999, doi. 10.1093/nar/gkaa172

By:

Vallecillo-Viejo, Isabel C;
Liscovitch-Brauer, Noa;
Diaz Quiroz, Juan F;
Montiel-Gonzalez, Maria F;
Nemes, Sonya E;
Rangan, Kavita J;
Levinson, Simon R;
Eisenberg, Eli;
Rosenthal, Joshua J C

Publication type:

Article

Enhanced affinity of racemic phosphorothioate DNA with transcription factor SATB1 arising from diastereomer-specific hydrogen bonds and hydrophobic contacts.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4551, doi. 10.1093/nar/gkaa170

By:

Yamasaki, Kazuhiko;
Akutsu, Yukie;
Yamasaki, Tomoko;
Miyagishi, Makoto;
Kubota, Tomomi

Publication type:

Article

Kin28 depletion increases association of TFIID subunits Taf1 and Taf4 with promoters in Saccharomyces cerevisiae.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4244, doi. 10.1093/nar/gkaa165

By:

Knoll, Elisabeth R;
Zhu, Z Iris;
Sarkar, Debasish;
Landsman, David;
Morse, Randall H

Publication type:

Article

Epigenetic engineering of yeast reveals dynamic molecular adaptation to methylation stress and genetic modulators of specific DNMT3 family members.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4081, doi. 10.1093/nar/gkaa161

By:

Finnegan, Alex I;
Kim, Somang;
Jin, Hu;
Gapinske, Michael;
Woods, Wendy S;
Perez-Pinera, Pablo;
Song, Jun S

Publication type:

Article

DIRS retrotransposons amplify via linear, single-stranded cDNA intermediates.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4230, doi. 10.1093/nar/gkaa160

By:

Malicki, Marek;
Spaller, Thomas;
Winckler, Thomas;
Hammann, Christian

Publication type:

Article

A novel transcriptional cascade is involved in Fzr-mediated endoreplication.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4214, doi. 10.1093/nar/gkaa158

By:

Qian, Wenliang;
Li, Zheng;
Song, Wei;
Zhao, Tujing;
Wang, Weina;
Peng, Jian;
Wei, Ling;
Xia, Qingyou;
Cheng, Daojun

Publication type:

Article

G-quadruplex ligands mediate downregulation of DUX4 expression.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4179, doi. 10.1093/nar/gkaa146

By:

Ciszewski, Lukasz;
Lu-Nguyen, Ngoc;
Slater, Alex;
Brennan, Andrew;
Williams, Huw E L;
Dickson, George;
Searle, Mark S;
Popplewell, Linda

Publication type:

Article

Direct observation and analysis of TET-mediated oxidation processes in a DNA origami nanochip.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4041, doi. 10.1093/nar/gkaa137

By:

Xing, Xiwen;
Sato, Shinsuke;
Wong, Nai-Kei;
Hidaka, Kumi;
Sugiyama, Hiroshi;
Endo, Masayuki

Publication type:

Article

Structure specific recognition of telomeric repeats containing RNA by the RGG-box of hnRNPA1.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4492, doi. 10.1093/nar/gkaa134

By:

Ghosh, Meenakshi;
Singh, Mahavir

Publication type:

Article

Microfluidic automated plasmid library enrichment for biosynthetic gene cluster discovery.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. e48, doi. 10.1093/nar/gkaa131

By:

Xu, Peng;
Modavi, Cyrus;
Demaree, Benjamin;
Twigg, Frederick;
Liang, Benjamin;
Sun, Chen;
Zhang, Wenjun;
Abate, Adam R

Publication type:

Article

A novel NGS library preparation method to characterize native termini of fragmented DNA.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. e47, doi. 10.1093/nar/gkaa128

By:

Harkins, Kelly M;
Schaefer, Nathan K;
Troll, Christopher J;
Rao, Varsha;
Kapp, Joshua;
Naughton, Colin;
Shapiro, Beth;
Green, Richard E

Publication type:

Article

Long noncoding RNA HCP5 participates in premature ovarian insufficiency by transcriptionally regulating MSH5 and DNA damage repair via YB1.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4480, doi. 10.1093/nar/gkaa127

By:

Wang, Xiaoyan;
Zhang, Xinyue;
Dang, Yujie;
Li, Duan;
Lu, Gang;
Chan, Wai-Yee;
Leung, Peter C K;
Zhao, Shidou;
Qin, Yingying;
Chen, Zi-Jiang

Publication type:

Article

Chimeric siRNAs with chemically modified pentofuranose and hexopyranose nucleotides: altritol-nucleotide (ANA) containing GalNAc–siRNA conjugates: in vitro and in vivo RNAi activity and resistance to 5′-exonuclease.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4028, doi. 10.1093/nar/gkaa125

By:

Kumar, Pawan;
Degaonkar, Rohan;
Guenther, Dale C;
Abramov, Mikhail;
Schepers, Guy;
Capobianco, Marie;
Jiang, Yongfeng;
Harp, Joel;
Kaittanis, Charalambos;
Janas, Maja M;
Castoreno, Adam;
Zlatev, Ivan;
Schlegel, Mark K;
Herdewijn, Piet;
Egli, Martin;
Manoharan, Muthiah

Publication type:

Article

The embryonic linker histone dBigH1 alters the functional state of active chromatin.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4147, doi. 10.1093/nar/gkaa122

By:

Climent-Cantó, Paula;
Carbonell, Albert;
Tatarski, Milos;
Reina, Oscar;
Bujosa, Paula;
Font-Mateu, Jofre;
Bernués, Jordi;
Beato, Miguel;
Azorín, Fernando

Publication type:

Article

Quantitative comparison of within-sample heterogeneity scores for DNA methylation data.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. e46, doi. 10.1093/nar/gkaa120

By:

Scherer, Michael;
Nebel, Almut;
Franke, Andre;
Walter, Jörn;
Lengauer, Thomas;
Bock, Christoph;
Müller, Fabian;
List, Markus

Publication type:

Article

A user-friendly, high-throughput tool for the precise fluorescent quantification of deoxyribonucleoside triphosphates from biological samples.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. e45, doi. 10.1093/nar/gkaa116

By:

Szabó, Judit Eszter;
Surányi, Éva Viola;
Mébold, Bence Sándor;
Trombitás, Tamás;
Cserepes, Mihály;
Tóth, Judit

Publication type:

Article

Deletion of Endonuclease V suppresses chemically induced hepatocellular carcinoma.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4463, doi. 10.1093/nar/gkaa115

By:

Kong, Xiang Yi;
Vik, Erik Sebastian;
Nawaz, Meh Sameen;
Berges, Natalia;
Dahl, Tuva Børresdatter;
Vågbø, Cathrine;
Suganthan, Rajikala;
Segers, Filip;
Holm, Sverre;
Quiles-Jiménez, Ana;
Gregersen, Ida;
Fladeby, Cathrine;
Aukrust, Pål;
Bjørås, Magnar;
Klungland, Arne;
Halvorsen, Bente;
Alseth, Ingrun

Publication type:

Article

Exonuclease combinations reduce noises in 3D genomics technologies.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. e44, doi. 10.1093/nar/gkaa106

By:

Kong, Siyuan;
Li, Qing;
Zhang, Gaolin;
Li, Qiujia;
Huang, Qitong;
Huang, Lei;
Zhang, Hui;
Huang, Yinghua;
Peng, Yanling;
Qin, Baoming;
Zhang, Yubo

Publication type:

Article

Allosteric coupling between Mn<sup>2+</sup> and dsDNA controls the catalytic efficiency and fidelity of cGAS.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4435, doi. 10.1093/nar/gkaa084

By:

Hooy, Richard M;
Massaccesi, Guido;
Rousseau, Kimberly E;
Chattergoon, Michael A;
Sohn, Jungsan

Publication type:

Article

ADAPT identifies an ESCRT complex composition that discriminates VCaP from LNCaP prostate cancer cell exosomes.

Published in:

Nucleic Acids Research, 2020, v. 48, n. 8, p. 4013, doi. 10.1093/nar/gkaa034

By:

Hornung, Tassilo;
O'Neill, Heather A;
Logie, Stephen C;
Fowler, Kimberly M;
Duncan, Janet E;
Rosenow, Matthew;
Bondre, Aniket S;
Tinder, Teresa;
Maher, Varun;
Zarkovic, Jelena;
Zhong, Zenyu;
Richards, Melissa N;
Wei, Xixi;
Miglarese, Mark R;
Mayer, Günter;
Famulok, Michael;
Spetzler, David

Publication type:

Article