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Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 54, doi. 10.1093/nar/gkx1166
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Crystal structure of NucB, a biofilm-degrading endonuclease.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 473, doi. 10.1093/nar/gkx1170
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The intrinsically disordered N-terminal arm of the brome mosaic virus coat protein specifically recognizes the RNA motif that directs the initiation of viral RNA replication.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 324, doi. 10.1093/nar/gkx1087
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Structural basis of DNA duplex distortion induced by thiazole-containing hairpin polyamides.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 42, doi. 10.1093/nar/gkx1211
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Incorporation of aptamers in the terminal loop of shRNAs yields an effective and novel combinatorial targeting strategy.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx980
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Modeling RNA secondary structure folding ensembles using SHAPE mapping data.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 314, doi. 10.1093/nar/gkx1057
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Shaping epigenetic memory via genomic bookmarking.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 83, doi. 10.1093/nar/gkx1200
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Conformational dynamics of the Hop1 HORMA domain reveal a common mechanism with the spindle checkpoint protein Mad2.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 279, doi. 10.1093/nar/gkx1196
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Inhibition of DNA replication by an anti-PCNA aptamer/PCNA complex.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 25, doi. 10.1093/nar/gkx1184
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Crystal structure of an anti-CRISPR protein, AcrIIA.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 485, doi. 10.1093/nar/gkx1181
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Human cancer tissues exhibit reduced A-to-I editing of miRNAs coupled with elevated editing of their targets.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 71, doi. 10.1093/nar/gkx1176
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Translation can affect the antisense activity of RNase H1-dependent oligonucleotides targeting mRNAs.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 293, doi. 10.1093/nar/gkx1174
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Separase prevents genomic instability by controlling replication fork speed.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 267, doi. 10.1093/nar/gkx1172
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Conformational dynamism for DNA interaction in the Salmonella RcsB response regulator.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 456, doi. 10.1093/nar/gkx1164
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Structure of mycobacterial 3'-to-5' RNA:DNA helicase Lhr bound to a ssDNA tracking strand highlights distinctive features of a novel family of bacterial helicases.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 442, doi. 10.1093/nar/gkx1163
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Heme promotes transcriptional and demethylase activities of Gis1, a member of the histone demethylase JMJD2/KDM4 family.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 215, doi. 10.1093/nar/gkx1051
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panX: pan-genome analysis and exploration.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx977
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A Thermus phage protein inhibits host RNA polymerase by preventing template DNA strand loading during open promoter complex formation.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 431, doi. 10.1093/nar/gkx1162
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Designer tRNAs for efficient incorporation of non-canonical amino acids by the pyrrolysine system in mammalian cells.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx1156
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Yaf9 subunit of the NuA4 and SWR1 complexes targets histone H3K27ac through its YEATS domain.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 421, doi. 10.1093/nar/gkx1151
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Diversity-generating retroelements: natural variation, classification and evolution inferred from a large-scale genomic survey.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 11, doi. 10.1093/nar/gkx1150
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Mechanism of formation of a toroid around DNA by the mismatch sensor protein.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 256, doi. 10.1093/nar/gkx1149
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Novel structural features drive DNA binding properties of Cmr, a CRP family protein in TB complex mycobacteria.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 403, doi. 10.1093/nar/gkx1148
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DNA polymerase beta participates in DNA End-joining.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 242, doi. 10.1093/nar/gkx1147
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Identification of diverse target RNAs that are functionally regulated by human Pumilio proteins.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 362, doi. 10.1093/nar/gkx1120
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The initiation, propagation and dynamics of CRISPR-SpyCas9 R-loop complex.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 350, doi. 10.1093/nar/gkx1117
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C/EBPβ mediates RNA polymerase III-driven transcription of oncomiR-138 in malignant gliomas.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 336, doi. 10.1093/nar/gkx1105
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The human papillomavirus DNA helicase E1 binds, stimulates, and confers processivity to cellular DNA polymerase epsilon.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 229, doi. 10.1093/nar/gkx1103
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Conventional and pioneer modes of glucocorticoid receptor interaction with enhancer chromatin in vivo.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 203, doi. 10.1093/nar/gkx1044
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Analysis of the natively unstructured RNA/protein-recognition core in the Escherichia coli RNA degradosome and its interactions with regulatory RNA/Hfq complexes.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 387, doi. 10.1093/nar/gkx1083
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Small RNA-mediated Cry toxin silencing allows Bacillus thuringiensis to evade Caenorhabditis elegans avoidance behavioral defenses.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 159, doi. 10.1093/nar/gkx959
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Detection of expanded RNA repeats using thermostable group II intron reverse transcriptase.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx867
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Regulation of transcriptional silencing and chromodomain protein localization at centromeric heterochromatin by histone H3 tyrosine 41 phosphorylation in fission yeast.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 189, doi. 10.1093/nar/gkx1010
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Nanoscale dynamics of centromere nucleosomes and the critical roles of CENP-A.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 94, doi. 10.1093/nar/gkx933
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Evaluation of fluorescence in situ hybridization techniques to study long non-coding RNA expression in cultured cells.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx946
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Dynamic site-specific recruitment of RBP2 by pocket protein p130 modulates H3K4 methylation on E2F-responsive promoters.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 174, doi. 10.1093/nar/gkx961
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Polysome-profiling in small tissue samples.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx940
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Translational co-regulation of a ligand and inhibitor by a conserved RNA element.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 104, doi. 10.1093/nar/gkx938
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Snail1 transcription factor controls telomere transcription and integrity.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 146, doi. 10.1093/nar/gkx958
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Modulation of extracytoplasmic function (ECF) sigma factor promoter selectivity by spacer region sequence.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 134, doi. 10.1093/nar/gkx953
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The SIN3A histone deacetylase complex is required for a complete transcriptional response to hypoxia.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 120, doi. 10.1093/nar/gkx951
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Dynamic motif occupancy (DynaMO) analysis identifies transcription factors and their binding sites driving dynamic biological processes.
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- Nucleic Acids Research, 2018, v. 46, n. 1, p. 1, doi. 10.1093/nar/gkx905
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