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Structural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13080, doi. 10.1093/nar/gkx1055
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- Article
Distinct roles for the IIId2 sub-domain in pestivirus and picornavirus internal ribosome entry sites.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13016, doi. 10.1093/nar/gkx991
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Structure of the large terminase from a hyperthermophilic virus reveals a unique mechanism for oligomerization and ATP hydrolysis.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13029, doi. 10.1093/nar/gkx947
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The mechanism and high-free-energy transition state of lac repressor–lac operator interaction.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12671, doi. 10.1093/nar/gkx862
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Corrigendum: Linnorm: improved statistical analysis for single cell RNA-seq expression data.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13907, doi. 10.1093/nar/gkx1189
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- Article
Linnorm: improved statistical analysis for single cell RNA-seq expression data.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx828
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Conserved structures formed by heterogeneous RNA sequences drive silencing of an inflammation responsive post-transcriptional operon.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12987, doi. 10.1093/nar/gkx979
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Aberrant ribonucleotide incorporation and multiple deletions in mitochondrial DNA of the murine MPV17 disease model.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12808, doi. 10.1093/nar/gkx1009
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Arrayed mutant haploid embryonic stem cell libraries facilitate phenotype-driven genetic screens.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx857
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Biogenesis and iron-dependency of ribosomal RNA hydroxylation.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12974, doi. 10.1093/nar/gkx969
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Characteristic arrangement of nucleosomes is predictive of chromatin interactions at kilobase resolution.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12739, doi. 10.1093/nar/gkx885
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Common TFIIH recruitment mechanism in global genome and transcription-coupled repair subpathways.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13043, doi. 10.1093/nar/gkx970
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Conserved non-coding elements: developmental gene regulation meets genome organization.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12611, doi. 10.1093/nar/gkx1074
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- Article
RNase H sequence preferences influence antisense oligonucleotide efficiency.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12932, doi. 10.1093/nar/gkx1073
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Secondary structure forming sequences drive SD-MMEJ repair of DNA double-strand breaks.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12848, doi. 10.1093/nar/gkx1056
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Structural basis for the functional role of the Shu complex in homologous recombination.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13068, doi. 10.1093/nar/gkx992
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CsrA maximizes expression of the AcrAB multidrug resistance transporter.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12798, doi. 10.1093/nar/gkx929
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Design and implementation of a synthetic pre-miR switch for controlling miRNA biogenesis in mammals.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx858
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Logical engineering of D-arm and T-stem of tRNA that enhances D-amino acid incorporation.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12601, doi. 10.1093/nar/gkx1129
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Tet1 facilitates hypoxia tolerance by stabilizing the HIF-α proteins independent of its methylcytosine dioxygenase activity.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12700, doi. 10.1093/nar/gkx869
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Epigenetic mechanisms underlie the crosstalk between growth factors and a steroid hormone.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12681, doi. 10.1093/nar/gkx865
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Global inhibition of transcription causes an increase in histone H2A.Z incorporation within gene bodies.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12715, doi. 10.1093/nar/gkx879
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Conformational profiling of a G-rich sequence within the c-KIT promoter.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13056, doi. 10.1093/nar/gkx983
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Rif1 promotes a repressive chromatin state to safeguard against endogenous retrovirus activation.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12723, doi. 10.1093/nar/gkx884
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Meta-analysis of DNA double-strand break response kinetics.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12625, doi. 10.1093/nar/gkx1128
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In silico direct folding of thrombin-binding aptamer G-quadruplex at all-atom level.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12648, doi. 10.1093/nar/gkx1079
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Multiple RNA structures affect translation initiation and UGA redefinition efficiency during synthesis of selenoprotein P.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13004, doi. 10.1093/nar/gkx982
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RBM45 competes with HDAC1 for binding to FUS in response to DNA damage.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12862, doi. 10.1093/nar/gkx1102
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Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx1194
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Optimizing DNA assembly based on statistical language modelling.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx859
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PLncPRO for prediction of long non-coding RNAs (lncRNAs) in plants and its application for discovery of abiotic stress-responsive lncRNAs in rice and chickpea.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 1, doi. 10.1093/nar/gkx866
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The RNA processing factors THRAP3 and BCLAF1 promote the DNA damage response through selective mRNA splicing and nuclear export.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12816, doi. 10.1093/nar/gkx1046
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PARP1 changes from three-dimensional DNA damage searching to one-dimensional diffusion after auto-PARylation or in the presence of APE1.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12834, doi. 10.1093/nar/gkx1047
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Discovering the 3' UTR-mediated regulation of alpha-synuclein.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12888, doi. 10.1093/nar/gkx1048
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Structure modeling of RNA using sparse NMR constraints.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12638, doi. 10.1093/nar/gkx1058
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NS3 helicase from dengue virus specifically recognizes viral RNA sequence to ensure optimal replication.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12904, doi. 10.1093/nar/gkx1127
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Corrigendum: Phospho-epitope binding by the BRCT domains of hPTIP controls multiple aspects of the cellular response to DNA damage.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 13904, doi. 10.1093/nar/gkx1140
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- Article
Derivation of nearest-neighbor DNA parameters in magnesium from single molecule experiments.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12921, doi. 10.1093/nar/gkx1161
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Structural basis for the GTP specificity of the RNA kinase domain of fungal tRNA ligase.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12945, doi. 10.1093/nar/gkx1159
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The mechano-chemistry of a monomeric reverse transcriptase.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12954, doi. 10.1093/nar/gkx1168
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Expanding the repertoire of DNA shape features for genome-scale studies of transcription factor binding.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12877, doi. 10.1093/nar/gkx1145
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Discovering cancer vulnerabilities using high-throughput micro-RNA screening.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12657, doi. 10.1093/nar/gkx1072
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Polycytidylation of mitochondrial mRNAs in Chlamydomonas reinhardtii.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12963, doi. 10.1093/nar/gkx903
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Independence between pre-mRNA splicing and DNA methylation in an isogenic minigene resource.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12780, doi. 10.1093/nar/gkx900
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Loss of imprinting mutations define both distinct and overlapping roles for misexpression of IGF2 and of H19 IncRNA.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12766, doi. 10.1093/nar/gkx896
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Accumulation of long-term transcriptionally active integrated retroviral vectors in active promoters and enhancers.
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- Nucleic Acids Research, 2017, v. 45, n. 22, p. 12752, doi. 10.1093/nar/gkx889
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