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Meta-analysis of transcriptomic datasets identifies genes enriched in the mammalian circadian pacemaker.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9860, doi. 10.1093/nar/gkx714
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Influence of nucleotide modifications at the C2' position on the Hoogsteen base-paired parallel-stranded duplex of poly(A) RNA.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10321, doi. 10.1093/nar/gkx713
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The kinetic mechanism of bacterial ribosome recycling.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10168, doi. 10.1093/nar/gkx694
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Self-biotinylation of DNA G-quadruplexes via intrinsic peroxidase activity.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9813, doi. 10.1093/nar/gkx765
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Pausing kinetics dominates strand-displacement polymerization by reverse transcriptase.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10190, doi. 10.1093/nar/gkx720
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Transcription-induced supercoiling explains formation of self-interacting chromatin domains in S. pombe.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9850, doi. 10.1093/nar/gkx716
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Mechanisms of transcription factor-mediated direct reprogramming of mouse embryonic stem cells to trophoblast stem-like cells.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10103, doi. 10.1093/nar/gkx692
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The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10293, doi. 10.1093/nar/gkx685
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Specific reverse transcriptase slippage at the HIV ribosomal frameshift sequence: potential implications for modulation of GagPol synthesis.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10156, doi. 10.1093/nar/gkx690
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Structure of a novel antibacterial toxin that exploits elongation factor Tu to cleave specific transfer RNAs.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10306, doi. 10.1093/nar/gkx700
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Stimulation of reverse transcriptase generated cDNAs with specific indels by template RNA structure: retrotransposon, dNTP balance, RT-reagent usage.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10143, doi. 10.1093/nar/gkx689
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Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9837, doi. 10.1093/nar/gkx680
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Using neural networks for reducing the dimensions of single-cell RNA-Seq data.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx681
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paraGSEA: a scalable approach for large-scale gene expression profiling.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx679
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Coexistence of two main folded G-quadruplexes within a single G-rich domain in the EGFR promoter.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10132, doi. 10.1093/nar/gkx678
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An RNA-targeted therapy for dystrophic epidermolysis bullosa.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10259, doi. 10.1093/nar/gkx669
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Distinct roles of Pcf11 zinc-binding domains in pre-mRNA 3'-end processing.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10115, doi. 10.1093/nar/gkx674
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TET2- and TDG-mediated changes are required for the acquisition of distinct histone modifications in divergent terminal differentiation of myeloid cells.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10002, doi. 10.1093/nar/gkx666
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A transcription network of interlocking positive feedback loops maintains intracellular iron balance in archaea.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9990, doi. 10.1093/nar/gkx662
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Mechanism of opening a sliding clamp.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10178, doi. 10.1093/nar/gkx665
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Direct modulation of T-box riboswitch-controlled transcription by protein synthesis inhibitors.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10242, doi. 10.1093/nar/gkx663
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Accurate and reproducible functional maps in 127 human cell types via 2D genome segmentation.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9823, doi. 10.1093/nar/gkx659
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Structural insights of lincosamides targeting the ribosome of Staphylococcus aureus.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10284, doi. 10.1093/nar/gkx658
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Salmonella STM1697 coordinates flagella biogenesis and virulence by restricting flagellar master protein FlhD<sub>4</sub>C<sub>2</sub> from recruiting RNA polymerase.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9976, doi. 10.1093/nar/gkx656
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Complementation of aprataxin deficiency by base excision repair enzymes in mitochondrial extracts.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10079, doi. 10.1093/nar/gkx654
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The abundance of Fob1 modulates the efficiency of rRFBs to stall replication forks.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10089, doi. 10.1093/nar/gkx655
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MutSβ abundance and Msh3 ATP hydrolysis activity are important drivers of CTG•CAG repeat expansions.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10068, doi. 10.1093/nar/gkx650
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Expression of short hairpin RNAs using the compact architecture of retroviral microRNA genes.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx653
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ARS2 is a general suppressor of pervasive transcription.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10229, doi. 10.1093/nar/gkx647
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Targeted chromatin ligation, a robust epigenetic profiling technique for small cell numbers.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx648
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Genome contact map explorer: a platform for the comparison, interactive visualization and analysis of genome contact maps.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 1, doi. 10.1093/nar/gkx644
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MAZ induces MYB expression during the exit from quiescence via the E2F site in the MYB promoter.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9960, doi. 10.1093/nar/gkx641
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Preferential microRNA targeting revealed by in vivo competitive binding and differential Argonaute immunoprecipitation.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10218, doi. 10.1093/nar/gkx640
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Modulation of proteostasis counteracts oxidative stress and affects DNA base excision repair capacity in ATM-deficient cells.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10042, doi. 10.1093/nar/gkx635
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Redundancy between nucleases required for homologous recombination promotes PARP inhibitor resistance in the eukaryotic model organism Dictyostelium.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10056, doi. 10.1093/nar/gkx639
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Interplay between PTB and miR-1285 at the p53 3′UTR modulates the levels of p53 and its isoform Δ40p53α.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10206, doi. 10.1093/nar/gkx630
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Parallel triplex structure formed between stretched single-stranded DNA and homologous duplex DNA.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10032, doi. 10.1093/nar/gkx628
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Decomposing protein-DNA binding and recognition using simplified protein models.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10270, doi. 10.1093/nar/gkx627
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Polμ tumor variants decrease the efficiency and accuracy of NHEJ.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 10018, doi. 10.1093/nar/gkx625
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Quantitative proteomics reveals that long non-coding RNA MALAT1 interacts with DBC1 to regulate p53 acetylation.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9947, doi. 10.1093/nar/gkx600
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HMGN1 and 2 remodel core and linker histone tail domains within chromatin.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9917, doi. 10.1093/nar/gkx579
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dCas9-based epigenome editing suggests acquisition of histone methylation is not sufficient for target gene repression.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9901, doi. 10.1093/nar/gkx578
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Dual function of Swc5 in SWR remodeling ATPase activation and histone H2A eviction.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9931, doi. 10.1093/nar/gkx589
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p53 regulates enhancer accessibility and activity in response to DNA damage.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9889, doi. 10.1093/nar/gkx577
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LMO2 is required for TAL1 DNA binding activity and initiation of definitive haematopoiesis at the haemangioblast stage.
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- Nucleic Acids Research, 2017, v. 45, n. 17, p. 9874, doi. 10.1093/nar/gkx573
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