Found: 49
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Algorithmic co-optimization of genetic constructs and growth conditions: application to 6-ACA, a potential nylon-6 precursor.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10560, doi. 10.1093/nar/gkv1071
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A SnoRNA-derived piRNA interacts with human interleukin-4 pre-mRNA and induces its decay in nuclear exosomes.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10474, doi. 10.1093/nar/gkv954
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New insights into the enzymatic role of EF-G in ribosome recycling.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10525, doi. 10.1093/nar/gkv995
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Base-resolution detection of N<sup>4</sup>-methylcytosine in genomic DNA using 4mC-Tet-assisted-bisulfite-sequencing.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv738
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Single-stranded DNA oligomers stimulate error-prone alternative repair of DNA double-strand breaks through hijacking Ku protein.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10264, doi. 10.1093/nar/gkv894
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Computational learning on specificity-determining residue-nucleotide interactions.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10180, doi. 10.1093/nar/gkv1134
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An endogenous protein inhibitor, YjhX (TopAI), for topoisomerase I from Escherichia coli.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10387, doi. 10.1093/nar/gkv1197
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A non-canonical multisubunit RNA polymerase encoded by a giant bacteriophage.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10411, doi. 10.1093/nar/gkv1095
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Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv715
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Discovery and characterization of Alu repeat sequences via precise local read assembly.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10292, doi. 10.1093/nar/gkv1089
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Integrating multi-scale data on homologous recombination into a new recognition mechanism based on simulations of the RecA-ssDNA/dsDNA structure.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10251, doi. 10.1093/nar/gkv883
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Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10168, doi. 10.1093/nar/gkv1039
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A reconstituted system reveals how activating and inhibitory interactions control DDK dependent assembly of the eukaryotic replicative helicase.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10238, doi. 10.1093/nar/gkv881
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Knockout of Drosophila RNase Z<sup>L</sup> impairs mitochondrial transcript processing, respiration and cell cycle progression.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10364, doi. 10.1093/nar/gkv1149
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Identification of bacterial sRNA regulatory targets using ribosome profiling.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10308, doi. 10.1093/nar/gkv1158
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Histone variant H3.3 provides the heterochromatic H3 lysine 9 tri-methylation mark at telomeres.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10227, doi. 10.1093/nar/gkv847
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Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv711
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BayesPI-BAR: a new biophysical model for characterization of regulatory sequence variations.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv733
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SerRS-tRNA<sup>Sec</sup> complex structures reveal mechanism of the first step in selenocysteine biosynthesis.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10534, doi. 10.1093/nar/gkv996
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- Article
Intergenic Alu exonisation facilitates the evolution of tissue-specific transcript ends.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10492, doi. 10.1093/nar/gkv956
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Mapping DNA cleavage by the Type ISP restriction-modification enzymes following long-range communication between DNA sites in different orientations.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10430, doi. 10.1093/nar/gkv1129
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DksA involvement in transcription fidelity buffers stochastic epigenetic change.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10190, doi. 10.1093/nar/gkv839
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Collaborator of alternative reading frame protein (CARF) regulates early processing of pre-ribosomal RNA by retaining XRN2 (5'-3' exoribonuclease) in the nucleoplasm.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10397, doi. 10.1093/nar/gkv1069
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Dynamical features of the Plasmodium falciparum ribosome during translation.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10515, doi. 10.1093/nar/gkv991
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Corrigendum.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10571, doi. 10.1093/nar/gkv1000
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Zebrafish lacking functional DNA polymerase gamma survive to juvenile stage, despite rapid and sustained mitochondrial DNA depletion, altered energetics and growth.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10338, doi. 10.1093/nar/gkv1139
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Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10114, doi. 10.1093/nar/gkv1133
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Nucleosome compaction facilitates HP1γ binding to methylated H3K9.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10200, doi. 10.1093/nar/gkv841
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DSSR: an integrated software tool for dissecting the spatial structure of RNA.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv716
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Blocking of targeted microRNAs from next-generation sequencing libraries.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv724
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A gating mechanism for Pi release governs the mRNA unwinding by eIF4AI during translation initiation.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10157, doi. 10.1093/nar/gkv1033
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Robust expression of vault RNAs induced by influenza A virus plays a critical role in suppression of PKR-mediated innate immunity.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10321, doi. 10.1093/nar/gkv1078
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Sources of PCR-induced distortions in high-throughput sequencing data sets.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv717
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Direct evidence of mitochondrial G-quadruplex DNA by using fluorescent anti-cancer agents.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10102, doi. 10.1093/nar/gkv1061
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Explaining the striking difference in twist-stretch coupling between DNA and RNA: A comparative molecular dynamics analysis.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10143, doi. 10.1093/nar/gkv1028
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Intrastrand triplex DNA repeats in bacteria: a source of genomic instability.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10126, doi. 10.1093/nar/gkv1017
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Xanthine and 8-oxoguanine in G-quadruplexes: formation of a G⋅G⋅X⋅O tetrad.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10506, doi. 10.1093/nar/gkv826
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A novel transcriptional regulator of L-arabinose utilization in human gut bacteria.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10546, doi. 10.1093/nar/gkv1005
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Thermodynamic fingerprints of ligand binding to human telomeric G-quadruplexes.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10376, doi. 10.1093/nar/gkv1167
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Sumoylation of Sir2 differentially regulates transcriptional silencing in yeast.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10213, doi. 10.1093/nar/gkv842
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DNA targeting by the type I-G and type I-A CRISPR-Cas systems of Pyrococcus furiosus.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10353, doi. 10.1093/nar/gkv1140
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Characterisation of aptamer-target interactions by branched selection and high-throughput sequencing of SELEX pools.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv700
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Backtracking behavior in viral RNA-dependent RNA polymerase provides the basis for a second initiation site.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10421, doi. 10.1093/nar/gkv1098
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Direct-Coupling Analysis of nucleotide coevolution facilitates RNA secondary and tertiary structure prediction.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10444, doi. 10.1093/nar/gkv932
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Mammalian splicing factor SF1 interacts with SURP domains of U2 snRNP-associated proteins.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10456, doi. 10.1093/nar/gkv952
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Dual-colour imaging of RNAs using quencher- and fluorophore-binding aptamers.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv718
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Human HLTF mediates postreplication repair by its HIRAN domain-dependent replication fork remodelling.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10277, doi. 10.1093/nar/gkv896
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The current state of eukaryotic DNA base damage and repair.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 10083, doi. 10.1093/nar/gkv1136
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Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data.
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- Nucleic Acids Research, 2015, v. 43, n. 21, p. 1, doi. 10.1093/nar/gkv727
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