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ESTHER, the database of the α/β‐hydrolase fold superfamily of proteins.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d145
By:
- Hotelier, Thierry;
- Renault, Ludovic;
- Cousin, Xavier;
- Negre, Vincent;
- Marchot, Pascale;
- Chatonnet, Arnaud
Publication type:
Article
yMGV: a cross‐species expression data mining tool.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d323
By:
- Lelandais, Gaëlle;
- Le Crom, Stéphane;
- Devaux, Frédéric;
- Vialette, Stéphane;
- Church, George M.;
- Jacq, Claude;
- Marc, Philippe
Publication type:
Article
NASCArrays: a repository for microarray data generated by NASC’s transcriptomics service.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d575
By:
- Craigon, David J.;
- James, Nick;
- Okyere, John;
- Higgins, Janet;
- Jotham, Joan;
- May, Sean
Publication type:
Article
SGMD: the Soybean Genomics and Microarray Database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d398
By:
- Alkharouf, Nadim W.;
- Matthews, Benjamin F.
Publication type:
Article
AluGene: a database of Alu elements incorporated within protein‐coding genes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d489
By:
- Dagan, Tal;
- Sorek, Rotem;
- Sharon, Eilon;
- Ast, Gil;
- Graur, Dan
Publication type:
Article
The Molecular Biology Database Collection: 2004 update.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d3
By:
- Galperin, Michael Y.
Publication type:
Article
EDITORIAL.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d1
Publication type:
Article
THGS: a web‐based database of Transmembrane Helices in Genome Sequences.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d125, doi. 10.1093/nar/gkh130
By:
- Fernando, S. A.;
- Selvarani, P.;
- Das, Soma;
- Kumar, Ch. Kiran;
- Mondal, Sukanta;
- Ramakumar, S.;
- Sekar, K.
Publication type:
Article
RegulonDB (version 4.0): transcriptional regulation, operon organization and growth conditions in Escherichia coli K‐12.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d303
By:
- Salgado, Heladia;
- Gama‐Castro, Socorro;
- Martínez‐Antonio, Agustino;
- Díaz‐Peredo, Edgar;
- Sánchez‐Solano, Fabiola;
- Peralta‐Gil, Martín;
- Garcia‐Alonso, Delfino;
- Jiménez‐Jacinto, Verónica;
- Santos‐Zavaleta, Alberto;
- Bonavides‐Martínez, César;
- Collado‐Vides, Julio
Publication type:
Article
The aMAZE LightBench: a web interface to a relational database of cellular processes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d443
By:
- Lemer, Christian;
- Antezana, Erick;
- Couche, Fabian;
- Fays, Frédéric;
- Santolaria, Xavier;
- Janky, Rekin’s;
- Deville, Yves;
- Richelle, Jean;
- Wodak, Shoshana J.
Publication type:
Article
dictyBase: a new Dictyostelium discoideum genome database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d332
By:
- Kreppel, Lisa;
- Fey, Petra;
- Gaudet, Pascale;
- Just, Eric;
- Kibbe, Warren A.;
- Chisholm, Rex L.;
- Kimmel, Alan R.
Publication type:
Article
MitoP2, an integrated database on mitochondrial proteins in yeast and man.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d459, doi. 10.1093/nar/gkh137
By:
- Andreoli, C.;
- Prokisch, H.;
- Hörtnagel, K.;
- Mueller, J. C.;
- Münsterkötter, M.;
- Scharfe, C.;
- Meitinger, T.
Publication type:
Article
EASED: Extended Alternatively Spliced EST Database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d70
By:
- Pospisil, Heike;
- Herrmann, Alexander;
- Bortfeldt, Ralf H.;
- Reich, Jens G.
Publication type:
Article
Hembase: browser and genome portal for hematology and erythroid biology.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d572
By:
- Goh, Sung‐Ho;
- Lee, Y. Terry;
- Bouffard, Gerard G.;
- Miller, Jeffery L.
Publication type:
Article
FLAGdb++: a database for the functional analysis of the Arabidopsis genome.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d347
By:
- Samson, Franck;
- Brunaud, Véronique;
- Duchêne, Sylvain;
- De Oliveira, Yannick;
- Caboche, Michel;
- Lecharny, Alain;
- Aubourg, Sébastien
Publication type:
Article
AANT: the Amino Acid–Nucleotide Interaction Database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d174
By:
- Hoffman, Michael M.;
- Khrapov, Maksim A.;
- Cox, J. Colin;
- Yao, Jianchao;
- Tong, Lingnan;
- Ellington, Andrew D.
Publication type:
Article
The Eukaryotic Promoter Database EPD: the impact of in silico primer extension.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d82
By:
- Schmid, Christoph D.;
- Praz, Viviane;
- Delorenzi, Mauro;
- Périer, Rouaïda;
- Bucher, Philipp
Publication type:
Article
UniProt: the Universal Protein knowledgebase.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d115
By:
- Apweiler, Rolf;
- Bairoch, Amos;
- Wu, Cathy H.;
- Barker, Winona C.;
- Boeckmann, Brigitte;
- Ferro, Serenella;
- Gasteiger, Elisabeth;
- Huang, Hongzhan;
- Lopez, Rodrigo;
- Magrane, Michele;
- Martin, Maria J.;
- Natale, Darren A.;
- O’Donovan, Claire;
- Redaschi, Nicole;
- Yeh, Lai‐Su L.
Publication type:
Article
IntEnz, the integrated relational enzyme database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d434
By:
- Fleischmann, Astrid;
- Darsow, Michael;
- Degtyarenko, Kirill;
- Fleischmann, Wolfgang;
- Boyce, Sinéad;
- Axelsen, Kristian B.;
- Bairoch, Amos;
- Schomburg, Dietmar;
- Tipton, Keith F.;
- Apweiler, Rolf
Publication type:
Article
The Mouse Genome Database (MGD): integrating biology with the genome.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d476
By:
- Bult, Carol J.;
- Blake, Judith A.;
- Richardson, Joel E.;
- Kadin, James A.;
- Eppig, Janan T.
Publication type:
Article
FREP: a database of functional repeats in mouse cDNAs.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d471
By:
- Nagashima, Takeshi;
- Matsuda, Hideo;
- Silva, Diego G.;
- Petrovsky, Nikolai
Publication type:
Article
DDBJ in the stream of various biological data.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d31, doi. 10.1093/nar/gkh127
By:
- Miyazaki, S.;
- Sugawara, H.;
- Ikeo, K.;
- Gojobori, T.;
- Tateno, Y.
Publication type:
Article
The Pfam protein families database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d138
By:
- Bateman, Alex;
- Coin, Lachlan;
- Durbin, Richard;
- Finn, Robert D.;
- Hollich, Volker;
- Griffiths‐Jones, Sam;
- Khanna, Ajay;
- Marshall, Mhairi;
- Moxon, Simon;
- Sonnhammer, Erik L. L.;
- Studholme, David J.;
- Yeats, Corin;
- Eddy, Sean R.
Publication type:
Article
The EMBL Nucleotide Sequence Database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d27
By:
- Kulikova, Tamara;
- Aldebert, Philippe;
- Althorpe, Nicola;
- Baker, Wendy;
- Bates, Kirsty;
- Browne, Paul;
- van den Broek, Alexandra;
- Cochrane, Guy;
- Duggan, Karyn;
- Eberhardt, Ruth;
- Faruque, Nadeem;
- Garcia‐Pastor, Maria;
- Harte, Nicola;
- Kanz, Carola;
- Leinonen, Rasko;
- Lin, Quan;
- Lombard, Vincent;
- Lopez, Rodrigo;
- Mancuso, Renato;
- McHale, Michelle
Publication type:
Article
Pathbase: a database of mutant mouse pathology.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d512
By:
- Schofield, Paul N.;
- Bard, Jonathan B. L.;
- Booth, Catherine;
- Boniver, Jacques;
- Covelli, Vincenzo;
- Delvenne, Philippe;
- Ellender, Michele;
- Engstrom, Wilhelm;
- Goessner, Wolfgang;
- Gruenberger, Michael;
- Hoefler, Heinz;
- Hopewell, John;
- Mancuso, Mariatheresa;
- Mothersill, Carmel;
- Potten, Christopher S.;
- Quintanilla‐Fend, Leticia;
- Rozell, Bjorn;
- Sariola, Hannu;
- Sundberg, John P.;
- Ward, Andrew
Publication type:
Article
The Rice PIPELINE: a unification tool for plant functional genomics.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d383
By:
- Yazaki, Junshi;
- Kojima, Keiichi;
- Suzuki, Kouji;
- Kishimoto, Naoki;
- Kikuchi, Shoshi
Publication type:
Article
ArchDB: automated protein loop classification as a tool for structural genomics.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d185
By:
- Espadaler, Jordi;
- Fernandez‐Fuentes, Narcis;
- Hermoso, Antonio;
- Querol, Enrique;
- Aviles, Francesc X.;
- Sternberg, Michael J. E.;
- Oliva, Baldomero
Publication type:
Article
The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d578
By:
- Chen, Josephine;
- Zhao, Po;
- Massaro, Donald;
- Clerch, Linda B.;
- Almon, Richard R.;
- DuBois, Debra C.;
- Jusko, William J.;
- Hoffman, Eric P.
Publication type:
Article
SNP500Cancer: a public resource for sequence validation and assay development for genetic variation in candidate genes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d528
By:
- Packer, Bernice R.;
- Yeager, Meredith;
- Staats, Brian;
- Welch, Robert;
- Crenshaw, Andrew;
- Kiley, Maureen;
- Eckert, Andrew;
- Beerman, Michael;
- Miller, Edward;
- Bergen, Andrew;
- Rothman, Nathaniel;
- Strausberg, Robert;
- Chanock, Stephen J.
Publication type:
Article
RPG: the Ribosomal Protein Gene database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d168
By:
- Nakao, Akihiro;
- Yoshihama, Maki;
- Kenmochi, Naoya
Publication type:
Article
Improvements in the HbVar database of human hemoglobin variants and thalassemia mutations for population and sequence variation studies.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d537
By:
- Patrinos, George P.;
- Giardine, Belinda;
- Riemer, Cathy;
- Miller, Webb;
- Chui, David H. K.;
- Anagnou, Nicholas P.;
- Wajcman, Henri;
- Hardison, Ross C.
Publication type:
Article
GeneDB: a resource for prokaryotic and eukaryotic organisms.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d339
By:
- Hertz‐Fowler, Christiane;
- Peacock, Chris S.;
- Wood, Valerie;
- Aslett, Martin;
- Kerhornou, Arnaud;
- Mooney, Paul;
- Tivey, Adrian;
- Berriman, Matthew;
- Hall, Neil;
- Rutherford, Kim;
- Parkhill, Julian;
- Ivens, Alasdair C.;
- Rajandream, Marie‐Adele;
- Barrell, Bart
Publication type:
Article
The SWISS‐MODEL Repository of annotated three‐dimensional protein structure homology models.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d230
By:
- Kopp, Jürgen;
- Schwede, Torsten
Publication type:
Article
CADRE: the Central Aspergillus Data REpository.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d401, doi. 10.1093/nar/gkh009
By:
- Mabey, J. E.;
- Anderson, M. J.;
- Giles, P. F.;
- Miller, C. J.;
- Attwood, T. K.;
- Paton, N. W.;
- Bornberg‐Bauer, E.;
- Robson, G. D.;
- Oliver, S. G.;
- Denning, D. W.
Publication type:
Article
Nematode.net: a tool for navigating sequences from parasitic and free‐living nematodes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d423
By:
- Wylie, Todd;
- Martin, John C.;
- Dante, Michael;
- Mitreva, Makedonka Dautova;
- Clifton, Sandra W.;
- Chinwalla, Asif;
- Waterston, Robert H.;
- Wilson, Richard K.;
- McCarter, James P.
Publication type:
Article
MaizeGDB, the community database for maize genetics and genomics.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d393
By:
- Lawrence, Carolyn J.;
- Dong, Qunfeng;
- Polacco, Mary L.;
- Seigfried, Trent E.;
- Brendel, Volker
Publication type:
Article
JASPAR: an open‐access database for eukaryotic transcription factor binding profiles.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d91
By:
- Sandelin, Albin;
- Alkema, Wynand;
- Engström, Pär;
- Wasserman, Wyeth W.;
- Lenhard, Boris
Publication type:
Article
RTCGD: retroviral tagged cancer gene database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d523
By:
- Akagi, Keiko;
- Suzuki, Takeshi;
- Stephens, Robert M.;
- Jenkins, Nancy A.;
- Copeland, Neal G.
Publication type:
Article
Flytrap, a database documenting a GFP protein‐trap insertion screen in Drosophila melanogaster.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d418
By:
- Kelso, Reed J.;
- Buszczak, Michael;
- Quiñones, Ana T.;
- Castiblanco, Claudia;
- Mazzalupo, Stacy;
- Cooley, Lynn
Publication type:
Article
The KNOTTIN website and database: a new information system dedicated to the knottin scaffold.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d156
By:
- Gelly, Jean‐Christophe;
- Gracy, Jérôme;
- Kaas, Quentin;
- Le‐Nguyen, Dung;
- Heitz, Annie;
- Chiche, Laurent
Publication type:
Article
TransportDB: a relational database of cellular membrane transport systems.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d284
By:
- Ren, Qinghu;
- Kang, Katherine H.;
- Paulsen, Ian T.
Publication type:
Article
AthaMap: an online resource for in silico transcription factor binding sites in the Arabidopsis thaliana genome.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d368
By:
- Steffens, Nils Ole;
- Galuschka, Claudia;
- Schindler, Martin;
- Bülow, Lorenz;
- Hehl, Reinhard
Publication type:
Article
NEMBASE: a resource for parasitic nematode ESTs.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d427
By:
- Parkinson, John;
- Whitton, Claire;
- Schmid, Ralf;
- Thomson, Marian;
- Blaxter, Mark
Publication type:
Article
KinG: a database of protein kinases in genomes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d153, doi. 10.1093/nar/gkh019
By:
- Krupa, A.;
- Abhinandan, K. R.;
- Srinivasan, N.
Publication type:
Article
Rice Proteome Database based on two‐dimensional polyacrylamide gel electrophoresis: its status in 2003.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d388
By:
- Komatsu, Setsuko;
- Kojima, Keiichi;
- Suzuki, Kouji;
- Ozaki, Kazuo;
- Higo, Kenichi
Publication type:
Article
LIFEdb: a database for functional genomics experiments integrating information from external sources, and serving as a sample tracking system.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d505
By:
- Bannasch, Detlev;
- Mehrle, Alexander;
- Glatting, Karl‐Heinz;
- Pepperkok, Rainer;
- Poustka, Annemarie;
- Wiemann, Stefan
Publication type:
Article
The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d262
By:
- Camon, Evelyn;
- Magrane, Michele;
- Barrell, Daniel;
- Lee, Vivian;
- Dimmer, Emily;
- Maslen, John;
- Binns, David;
- Harte, Nicola;
- Lopez, Rodrigo;
- Apweiler, Rolf
Publication type:
Article
The microRNA Registry.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d109
By:
- Griffiths‐Jones, Sam
Publication type:
Article
DEG: a database of essential genes.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d271
By:
- Zhang, Ren;
- Ou, Hong‐Yu;
- Zhang, Chun‐Ting
Publication type:
Article
APD: the Antimicrobial Peptide Database.
Published in:
Nucleic Acids Research, 2004, v. 32, n. suppl 1, p. d590
By:
- Wang, Zhe;
- Wang, Guangshun
Publication type:
Article

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